Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.6   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-u.4   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.9   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.notissue   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.tis   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.str   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.hor   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.bio   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.lig   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 ath-e.1   AT2G30100   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.4   100804151   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 
 gma-u.4   100792633   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 
 ppo-u.4   7454844   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 
 mtr-u.4   25490971   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 
 sly-u.4   101264720   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 
 osa-u.4   4338507   pentatricopeptide repeat-containing protein At2g30100, chloroplastic 

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Top 50 coexpressed genes to AT2G30100 (ath-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath52   Galactose metabolism  1 57 -
 ath53   Ascorbate and aldarate metabolism  2 63 -
 ath500   Starch and sucrose metabolism  2 172 -
 ath1240   Biosynthesis of cofactors  2 236 -
 ath4075   Plant hormone signal transduction  3 291 -

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ath:AT2G30100 (pentatricopeptide (PPR) repeat-containing protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-r.6
for
AT2G30100
ath-u.4
for
AT2G30100
ath-m.9
for
AT2G30100
ath-m.4.notissue
for
AT2G30100
ath-m.4.tis
for
AT2G30100
ath-m.4.str
for
AT2G30100
ath-m.4.hor
for
AT2G30100
ath-m.4.bio
for
AT2G30100
ath-m.4.lig
for
AT2G30100
ath-e.1
for
AT2G30100
gma-u.4
for
100804151
gma-u.4
for
100792633
ppo-u.4
for
7454844
mtr-u.4
for
25490971
sly-u.4
for
101264720
osa-u.4
for
4338507
1 AT1G11440 uncharacterized protein 837686 At1g11440 6.5 4.2
 0.7
 3473.2
 0.3
 1.0
 0.6
 0.5
 -0.2
 3.5
 1.5
 1.0
 -0.8
 -0.3
 1.2
2 TIFY7 TIFY domain/Divergent CCT motif family protein 843407 At1g70700 5.5 3.3
 0.2
 18598.4
 0.6
 -0.6
 -0.7
 -0.7
 -0.1
 3.8





3 AT5G67150 HXXXD-type acyl-transferase family protein 836850 At5g67150 5.5 3.0
 -0.3
 3095.5
 1.3
 1.6
 0.6
 0.1
 -0.7
 2.9
 0.6
-0.2
 0.5
0.1
 -0.9
-1.1
 1.5
1.5
 0.3
0.3
 -0.1
-0.8
4 KCO6 Ca2+ activated outward rectifying K+ channel 6 827541 At4g18160 5.2 2.4
 -1.1
 17389.0
 -0.7
 -0.8
 -1.1
 -0.1
 0.7
 3.3
 0.6
0.4
 2.2
1.3
 1.9
1.7
 1.7
1.2
 1.9
-0.9
 0.1
5 AT2G42760 DUF1685 family protein 818876 At2g42760 5.0 2.9
 0.1
 15552.3
 0.1
 0.1
 0.4
 -1.2
 0.1
 4.7
 2.4
1.4
 1.7
0.6
 1.3
-0.8
 3.1
1.9
 0.9
0.4
 -0.3
6 SPA4 SPA1-related 4 841743 At1g53090 4.9 2.8
 -0.0
 10266.4
 0.1
 0.3
 0.0
 0.1
 -1.5
 3.7
 2.2
1.9
 2.3
1.8
 1.8
0.6
 3.0
 3.0
1.0
 2.0
7 ftsh9 FTSH protease 9 836004 At5g58870 4.7 2.7
 0.0
 3453.3
 0.2
 1.1
 0.9
 1.3
 -2.0
 2.9
 3.9
2.4
 3.6
2.2
 5.0
2.8
 3.9
 3.5
 2.7
8 MBD11 methyl-CPG-binding domain 11 820822 At3g15790 4.7 3.4
 1.1
 15518.1
 0.9
 -0.1
 -1.2
 -1.0
 -1.1
 4.0
 2.5
1.9
 2.8
2.7
 1.2
0.5
 2.5
-0.2
 2.3
1.1
 1.4
9 PMI2 PLASTID MOVEMENT IMPAIRED protein (DUF827) 843002 At1g66840 4.6 3.3
 1.0
 2968.7
 -0.0
 1.0
 1.1
 0.5
 -2.2
 5.0
 1.6
1.6
 1.4
1.1
 -0.1
 0.7
 1.3
 0.9
10 AT5G02950 Tudor/PWWP/MBT superfamily protein 831728 At5g02950 4.6 3.1






3.0
 4.0
3.0
 3.5
3.0
 3.0
1.7
 1.8
1.2
 0.9
-1.1
 0.4
-0.2
11 AT1G66330 senescence-associated family protein 842950 At1g66330 4.6 4.0
 2.3
 2444.2
 1.0
 1.2
 0.8
 1.9
 -1.6
 1.5
 2.6
1.2
 1.2
0.7
 1.3
 1.3
 1.6
 -0.1
12 SS2 starch synthase 2 820294 At3g01180 4.6 2.3
 -0.6
 3750.6
 1.0
 1.3
 1.4
 0.0
 -2.8
 4.7
 1.5
1.5
 2.1
1.4
 2.3
 2.0
 2.0
 1.4
0.3
13 AT3G07310 phosphoserine aminotransferase, putative (DUF760) 819919 At3g07310 4.5 2.7
 0.1
 15141.5
 0.3
 -0.8
 -0.5
 1.4
 -0.4
 1.7
 2.8
1.9
 2.0
1.7
 1.1
 1.7
 1.9
 2.8
14 BMY3 beta-amylase 3 831985 At5g18670 4.5 2.7
 0.2
 9559.1
 0.9
 1.0
 -0.9
 -0.8
 0.3
 0.6
 3.9
3.6
 3.8
3.5
 0.0
 1.3
 1.0
 0.5
0.2
15 BEL10 BEL1-like homeodomain 10 838558 At1g19700 4.5 3.7
 2.0
 1719.4
 -0.0
 1.6
 0.3
 1.8
 -1.8
 3.2
 3.2
2.8
 3.9
3.8
 1.5
1.1
 3.3
2.1
 3.6
0.8
 2.5
1.4
16 AT1G64500 Glutaredoxin family protein 842758 At1g64500 4.5 2.4
 -0.4
 5518.7
 -0.1
 0.8
 1.1
 0.3
 -1.9
 1.7
 1.9
 1.9
 1.6
 0.5
 0.9
 1.1
17 AT3G52230 uncharacterized protein 824388 At3g52230 4.5 2.6
 -0.0
 8648.8
 0.2
 0.0
 0.6
 0.2
 -1.6
 1.3
 -0.2
-0.4
 0.1
-0.6
 0.1
 3.0
 -0.0
 1.1
18 AT5G52420 uncharacterized protein 835318 At5g52420 4.5 2.2
 -0.7
 8077.6
 -0.3
 0.3
 0.1
 1.0
 -2.3
 2.4
 1.9
0.3
 1.9
1.4
 2.1
 0.4
 2.3
19 PMI1 plastid movement impaired1 840860 At1g42550 4.4 2.6
 0.0
 10203.1
 0.2
 -0.3
 0.7
 0.4
 -1.2
 2.5
 3.2
1.9
 2.9
1.7
 1.4
1.3
 0.4
0.4
 1.8
 0.8
20 SPL11 squamosa promoter-like 11 839625 At1g27360 4.4 3.5
 1.6
 3786.6
 1.5
 0.8
 1.5
 -0.2
 0.9
 2.0





21 CIPK1 CBL-interacting protein kinase 1 821016 At3g17510 4.4 2.2
 -0.6
 18170.0
 -3.2
 -0.4
 -2.1
 0.1
 -1.5
 2.2
 1.6
1.3
 1.9
1.7
 0.3
 4.2
0.2
 1.1
-0.7
 1.2
0.3
22 JAZ6 jasmonate-zim-domain protein 6 843577 At1g72450 4.4 3.0
 0.7
 14493.0
 0.7
 -0.1
 0.0
 -0.9
 1.1
 2.8





23 VTC2 GDP-L-galactose phosphorylase 1 828792 At4g26850 4.3 2.7
 0.3
 2792.1
 -0.2
 1.5
 0.7
 0.9
 -2.1
 3.2
 1.0
0.9
 2.0
1.9
 3.0
1.8
 2.9
1.9
 2.4
0.6
 1.7
24 MYC4 Basic helix-loop-helix (bHLH) DNA-binding family protein 827511 At4g17880 4.3 1.7
 -1.3
 3236.0
 0.6
 1.8
 0.3
 0.4
 -2.7
 3.3
 2.1
1.5
 3.0
2.4
 0.2
0.1
 3.5
1.1
 2.1
1.4
 -0.1
25 AT2G22200 Integrase-type DNA-binding superfamily protein 816754 At2g22200 4.3 2.0
 -0.8
 18497.2
 -2.3
 -0.2
 -1.6
 -0.3
 1.4
 2.2
 1.3
1.2
 2.5
1.6
 0.0
-0.2
 1.4
1.0
 0.3
-0.1
 1.2
0.2
26 NCS1 permease, cytosine/purines, uracil, thiamine, allantoin family protein 831791 At5g03555 4.2 2.6
 0.2
 6074.8
 -0.5
 0.8
 0.6
 0.5
 -1.6
 1.8
 2.3
1.3
 2.5
1.1
 1.5
 0.4
-0.8
 1.3
 -0.1
27 ACHT4 atypical CYS HIS rich thioredoxin 4 837379 At1g08570 4.2 2.6
 0.2
 21621.3
 -0.1
 -1.9
 -1.7
 -0.3
 -0.7
 1.5
 3.1
1.7
 3.0
1.4
 3.5
0.9
 2.7
 3.3
0.8
 2.4
0.1
28 AT1G68440 uncharacterized protein 843173 At1g68440 4.2 2.1
 -0.6
 16297.4
 -0.3
 0.1
 -1.1
 -0.6
 -0.4
 3.6
 1.9
1.9
 2.0
2.0
 0.0
-0.4
 2.2
0.4
 -0.1
-0.5
29 PIP5K9 phosphatidyl inositol monophosphate 5 kinase 820151 At3g09920 4.2 2.4
 -0.1
 18276.7
 0.3
 -0.1
 0.7
 -2.2
 -1.8
 2.7
 1.6
1.5
 1.7
1.0
 2.5
 1.9
 0.9
 0.4
30 AT5G08430 SWIB/MDM2 and Plus-3 and GYF domain-containing protein 830742 At5g08430 4.1 3.2
 1.4
 3128.3
 0.2
 1.5
 -0.1
 0.8
 -1.3
 2.1
 0.6
-0.8
 0.4
-0.1
 1.4
-1.7
 -0.4
-1.4
 0.5
-0.1
 -0.7
31 AT4G38810 Calcium-binding EF-hand family protein 830036 At4g38810 4.1 2.1
 -0.4
 20228.2
 -0.8
 -1.1
 -0.7
 -0.4
 -1.3
 3.7
 1.1
0.4
 0.5
0.5
 1.3
0.4
 -0.5
-0.5
 0.5
 1.8
0.2
32 AT5G54170 Polyketide cyclase/dehydrase and lipid transport superfamily protein 835505 At5g54170 4.1 2.0
 -0.5
 19955.0
 -0.9
 -1.0
 0.6
 -1.3
 -0.4
 2.8





33 ULI3 Cysteine/Histidine-rich C1 domain family protein 836114 At5g59920 4.0 2.7






0.6





34 CLH1 chlorophyllase 1 838554 At1g19670 4.0 2.5
 0.3
 11814.5
 0.7
 -0.1
 0.3
 -0.3
 -1.8
 3.9
 0.4
0.0
 0.5
-0.1
 -1.4
-1.7
 0.0
 -0.5
-1.2
35 RVE8 Homeodomain-like superfamily protein 820117 At3g09600 4.0 2.4
 0.2
 3330.7
 -0.0
 1.2
 0.5
 -0.4
 -0.4
 2.7
 1.0
0.9
 1.2
0.9
 1.8
1.0
 0.8
 1.1
36 TIFY10B TIFY domain/Divergent CCT motif family protein 843834 At1g74950 4.0 2.6
 0.6
 18777.7
 -0.5
 -0.9
 -0.6
 -0.6
 1.0
 5.4
 0.6
0.4
 -0.1
-0.1
 -0.7
-0.8
 0.9
0.7
 -0.3
-0.4
 0.7
-0.2
37 COP1 Transducin/WD40 repeat-like superfamily protein 817857 At2g32950 4.0 3.4
 1.9
 1211.1
 2.8
 2.3
 1.1
 0.9
 -2.3
 2.7
 0.4
0.3
 1.1
0.8
 2.7
1.3
 2.8
 3.1
-0.2
 2.0
38 AT1G49520 SWIB complex BAF60b domain-containing protein 841376 At1g49520 4.0 2.2
 -0.1
 19014.3
 0.1
 -0.7
 -0.7
 -0.4
 0.8
 4.8
 0.3
0.3
 0.4
-0.9
 1.2
0.0
 -0.4
 0.5
 -0.7
39 AT2G34310 uncharacterized protein 817992 At2g34310 3.9 3.0
 1.4
 2145.1
 0.4
 1.0
 0.8
 0.9
 -1.0
 4.5
 0.4
0.2
 0.9
0.4
 0.9
0.1
 1.3
-0.8
 1.2
40 IAR3 peptidase M20/M25/M40 family protein 841602 At1g51760 3.8 3.1






3.9
 1.0
-0.3
 0.5
-0.4
 0.4
 1.3
0.4
 2.1
-1.7
 0.5
41 AT4G16490 ARM repeat superfamily protein 827347 At4g16490 3.8 1.8
 -0.7
 21851.5
 0.8
 -1.1
 -1.3
 -0.5
 -1.2
 2.5
 1.6
1.2
 3.3
1.1
 1.8
0.6
 2.7
 2.6
0.6
 1.4
42 AT1G76380 DNA-binding bromodomain-containing protein 843970 At1g76380 3.8 3.7
 2.6
 11862.2
 0.9
 0.3
 -0.8
 0.0
 0.4
 4.4
 0.7
-0.6
 1.2
0.7
 1.1
1.0
 -0.6
 -0.2
-2.0
 -0.8
43 RVE1 Homeodomain-like superfamily protein 831595 At5g17300 3.8 1.9
 -0.5
 16146.0
 -0.8
 -0.3
 -0.6
 -0.3
 0.5
 1.9
 2.6
1.8
 3.1
2.5
 2.6
2.2
 0.7
0.3
 1.2
1.1
 0.3
44 AT1G61740 Sulfite exporter TauE/SafE family protein 842471 At1g61740 3.8 2.2
 -0.1
 18363.9
 0.1
 -0.7
 -0.1
 -0.3
 1.3
 -0.2
 0.4
0.2
 0.9
0.0
 -1.1
 -1.1
 1.0
0.2
 0.3
-0.6
45 VTC5 GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) 835603 At5g55120 3.8 2.4
 0.4
 11930.0
 1.0
 0.9
 -1.3
 -1.0
 -1.5
 3.2
 1.0
0.9
 2.0
1.9
 3.0
1.8
 2.9
1.9
 2.4
0.6
 1.7
46 AT3G24190 Protein kinase superfamily protein 822005 At3g24190 3.8 2.0
 -0.4
 7196.2
 -0.2
 0.6
 0.8
 -0.0
 -2.1
 0.1
 2.4
2.3
 3.0
2.7
 3.0
 1.0
 1.2
 1.6
47 PUB8 plant U-box 8 827885 At4g21350 3.8 1.2
 -1.7
 10007.8
 0.2
 -0.4
 -0.2
 0.9
 0.1
 3.0
 3.1
3.0
 3.0
2.9
 1.0
-1.0
 1.3
 2.2
 1.2
48 BT3 BTB and TAZ domain protein 3 837076 At1g05690 3.8 2.5
 0.5
 5501.9
 -0.8
 1.1
 -0.5
 0.0
 -1.0
 2.5

0.4
-0.3
 0.7
 0.2
-0.5
 1.5
49 HPL1 hydroperoxide lyase 1 827215 At4g15440 3.7 2.5
 0.6
 16164.1
 1.1
 -0.6
 -0.3
 -0.4
 -0.4
 0.4
 -0.9
 -2.1
 -0.4
 0.5
 -0.8
 0.6
50 ATBETAFRUCT4 Glycosyl hydrolases family 32 protein 837777 At1g12240 3.7 2.3
 0.3
 7500.8
 -0.4
 1.5
 0.3
 -0.8
 -0.9
 3.1
 1.5
0.2
 1.6
0.5
 0.1
-0.1
 0.3
 0.2
-1.3
 0.0
-0.6
The preparation time of this page was 0.7 [sec].