Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-r.6   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.9   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.notissue   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.tis   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.str   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.hor   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.bio   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.lig   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 ath-e.1   AT3G12260   LYR family of Fe/S cluster biogenesis protein 
 gma-u.4   100814371   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 
 gma-u.4   100791392   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 
 ppo-u.4   18094349   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 
 mtr-u.4   11446007   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 
 sly-u.4   101251020   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 
 osa-u.4   4344058   NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 

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Top 50 coexpressed genes to AT3G12260 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath190   Oxidative phosphorylation  18 164 24.72
 ath3020   RNA polymerase  1 52 -
 ath3050   Proteasome  1 61 -
 ath4145   Phagosome  1 83 -
 ath4146   Peroxisome  1 88 -

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ath:AT3G12260 (LYR family of Fe/S cluster biogenesis protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G12260
ath-r.6
for
AT3G12260
ath-m.9
for
AT3G12260
ath-m.4.notissue
for
AT3G12260
ath-m.4.tis
for
AT3G12260
ath-m.4.str
for
AT3G12260
ath-m.4.hor
for
AT3G12260
ath-m.4.bio
for
AT3G12260
ath-m.4.lig
for
AT3G12260
ath-e.1
for
AT3G12260
gma-u.4
for
100814371
gma-u.4
for
100791392
ppo-u.4
for
18094349
mtr-u.4
for
11446007
sly-u.4
for
101251020
osa-u.4
for
4344058
1 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit 829382 At4g32470 13.0 12.6
 9.9
 1.4
 2.9
 5.1
 3.0
 3.6
 1.1
 7.1
 2.0
1.6
 2.6
1.5
 4.3
3.6
 10.9
 14.2
 9.2
2 AT4G20150 excitatory amino acid transporter 827761 At4g20150 11.6 12.0
 8.1
 5.0
 5.1
 5.0
 4.5
 3.3
 1.7
 3.4
 3.5
3.4
 3.6
3.4
 5.6
3.3
 8.7
 8.1
 8.8
3 CIB22 LYR family of Fe/S cluster biogenesis protein 829622 At4g34700 11.2 11.6
 7.8
 10.8
 4.8
 5.3
 0.5
 2.0
 1.1
 4.3
 3.1
2.3
 3.6
3.1
 5.6
 11.0
 8.6
 10.4
4 AT5G08060 furry 830700 At5g08060 11.0 9.4
 9.6
 6.9
 3.3
 4.0
 4.1
 3.0
 1.7
 7.0
 3.5
2.4
 3.9
2.9
 6.9
 4.9
 9.3
1.3
 4.0
5 AT5G47570 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 834807 At5g47570 11.0 9.4
 9.6
 7.1
 4.2
 4.2
 5.0
 5.0
 1.6
 4.9
 4.8
3.0
 4.9
3.2
 5.9
 9.8
 7.7
 5.7
6 SDH6 succinate dehydrogenase subunit 837369 At1g08480 10.8 10.1
 8.7
 8.4
 4.1
 4.4
 2.1
 3.5
 -0.1
 5.8
 3.8
 4.7
 2.6
 7.2
 6.0
5.5
 9.1
7 ATP3 gamma subunit of Mt ATP synthase 817866 At2g33040 10.0 9.3
 8.0
 142.7
 3.4
 1.6
 2.6
 2.6
 1.8
 4.4
 5.3
5.0
 5.4
4.8
 5.9
2.5
 7.4
 4.7
 5.3
8 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 834749 At5g47030 10.0 9.6
 7.7
 95.3
 2.6
 2.7
 1.0
 1.2
 1.9
 6.5
 3.7
3.5
 3.8
3.6
 6.4
5.3
 9.1
 8.6
7.0
 6.2
9 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein 820256 At3g10860 9.9 9.2
 7.9
 23.4
 5.3
 4.7
 2.8
 2.8
 1.1
 4.1
 5.4
5.4
 6.0
5.4
 5.8
3.2
 7.1
 8.5
6.7
 5.5
4.9
10 AT3G08610 NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 820008 At3g08610 9.7 10.2
 6.6
 18.9
 3.7
 3.9
 1.6
 2.6
 -0.2
 4.3
 3.2
2.9
 2.8
2.5
 6.6
 7.3
 4.3
 8.3
11 AT2G33220 GRIM-19 protein 817884 At2g33220 9.7 10.9
 5.9
 106.9
 2.7
 3.7
 0.7
 4.7
 1.3
 5.8
 4.1
3.1
 5.2
4.0
 5.2
4.9
 7.7
 7.1
 7.9
12 AT1G76200 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 843953 At1g76200 9.6 9.4
 7.2
 76.5
 3.6
 3.1
 1.8
 3.0
 1.4
 2.4
 2.9
2.7
 3.7
3.3
 6.0
5.1
 7.8
 6.7
 6.6
3.4
13 AT5G52840 NADH-ubiquinone oxidoreductase-like protein 835361 At5g52840 9.5 8.5
 8.0
 3.5
 4.1
 4.8
 4.9
 2.2
 1.3
 3.2
 3.1
 4.0
 6.2
0.7
 7.4
 5.0
 7.8
14 FKBP12 FK506-binding protein 12 836556 At5g64350 9.5 10.3
 6.1
 2.5
 4.3
 4.4
 3.2
 4.4
 2.1
 5.6
 2.7
1.3
 2.1
2.1
 3.2
 7.4
 3.3
 2.7
15 AT3G07480 2Fe-2S ferredoxin-like superfamily protein 819936 At3g07480 9.3 7.9
 8.2
 14.1
 3.7
 3.5
 4.8
 2.3
 3.3
 4.9
 2.9
2.7
 3.9
3.1
 5.9
5.8
 5.6
 6.6
6.0
 4.4
16 AT4G16450 NADH-ubiquinone oxidoreductase 827343 At4g16450 9.2 9.6
 6.3
 22.6
 3.8
 3.5
 1.3
 2.7
 0.6
 5.2
 6.2
5.6
 4.9
4.7
 4.5
1.9
 8.3
 8.2
 8.5
17 AT1G72020 TonB-dependent heme receptor A 843533 At1g72020 9.2 8.0
 7.9
 34.3
 4.6
 3.4
 1.4
 2.6
 1.8
 6.1
 4.9
4.1
 4.7
3.9
 4.2
4.0
 6.8
 8.2
 6.9
18 AT4G37830 cytochrome c oxidase-like protein 829939 At4g37830 9.0 9.6
 6.0
 34.1
 3.1
 3.6
 0.9
 2.2
 0.9
 5.3
 3.3
2.8
 4.1
3.1
 10.4
 10.4
 8.5
0.4
 4.9
19 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 822364 At3g27430 9.0 8.8
 6.7
 49.4
 3.1
 3.7
 2.8
 1.9
 -0.3
 3.4
 2.1
-0.6
 1.5
-0.1
 4.5
3.8
 2.7
1.0
 4.0
3.2
 2.7
20 PRXIIF peroxiredoxin IIF 819778 At3g06050 8.8 8.8
 6.4
 39.3
 1.0
 3.7
 3.3
 2.4
 1.7
 6.3
 2.3
2.2
 3.0
2.6
 3.8
 6.1
 1.7
 2.8
21 AT3G03070 NADH-ubiquinone oxidoreductase-like protein 821133 At3g03070 8.7 8.7
 6.4
 12.7
 2.3
 4.2
 3.4
 3.2
 2.4
 5.8
 4.3
2.6
 4.3
2.6
 4.3
 8.5
 8.4
 6.1
22 ATP5 delta subunit of Mt ATP synthase 831186 At5g13450 8.5 8.5
 6.1
 138.4
 3.5
 2.1
 1.2
 2.4
 0.9
 2.8
 3.5
1.6
 4.3
1.5
 5.7
 7.1
 7.8
 5.4
23 SDH7 succinate dehydrogenase subunit 823938 At3g47833 8.3 8.1
 6.4
 14.0
 3.1
 4.4
 2.5
 3.0
 -0.7
 6.7
 3.2
3.0
 3.7
2.7
 2.4
1.2
 6.0
 7.1
 4.6
24 AT4G22310 Uncharacterized protein family (UPF0041) 828326 At4g22310 8.3 8.5
 5.9
 84.9
 2.2
 2.8
 1.1
 1.1
 0.5
 3.2
 2.9
0.7
 2.8
2.4
 5.1
 7.0
 7.1
 3.4
0.2
25 AT2G31490 neuronal acetylcholine receptor subunit alpha-5 817707 At2g31490 8.3 8.4
 5.8
 111.2
 3.3
 2.8
 2.0
 2.3
 1.0
 2.8
 6.4
 5.7
 5.9
 5.1
 4.6
 10.2
4.3
26 TO1 thioredoxin O1 818065 At2g35010 8.2 8.9
 5.3
 78.8
 3.0
 3.7
 2.1
 2.3
 -1.5
 3.7
 1.4
0.3
 2.6
0.8
 0.9
 1.8
 4.1
 1.9
27 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit 828130 At4g02580 8.2 7.3
 6.9
 40.6
 2.6
 2.4
 1.4
 3.8
 -0.4
 3.5
 3.6
2.4
 3.6
3.3
 4.8
1.9
 6.8
 4.8
 5.1
28 AT1G51650 ATP synthase epsilon chain 841590 At1g51650 8.1 8.6
 5.4
 259.1
 3.7
 1.5
 2.5
 1.8
 1.2
 5.2
 3.4
2.9
 2.3
2.3
 7.2
6.0
 7.9
 9.7
4.2
 6.2
29 MGP1 MALE GAMETOPHYTE DEFECTIVE 1 816723 At2g21870 8.0 6.4
 7.5
 8.8
 2.7
 4.9
 2.9
 2.1
 2.9
 1.3
 4.1
3.3
 3.3
3.2
 4.0
1.7
 8.6
 3.8
 4.2
30 GAMMA CA3 gamma carbonic anhydrase 3 836783 At5g66510 7.9 6.8
 6.9
 65.3
 2.4
 2.3
 3.7
 2.1
 1.9
 3.0
 4.1
4.1
 4.6
4.4
 6.2
5.9
 9.5
8.2
 9.0
8.3
 8.1
5.1
31 AT1G49140 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6) 841337 At1g49140 7.9 8.5






4.2
 4.1
2.3
 4.3
3.0
 7.6
1.8
 5.7
 7.4
 8.3
32 MSD1 manganese superoxide dismutase 1 820263 At3g10920 7.9 8.5
 5.1
 36.0
 3.7
 2.6
 1.6
 3.4
 0.1
 3.6
 3.0
2.6
 3.5
2.9
 3.6
2.6
 4.3
 6.1
 3.2
33 AT2G46540 fiber 819266 At2g46540 7.9 8.8
 4.8
 17.9
 3.1
 4.2
 1.4
 3.0
 -0.3
 4.0
 4.3
1.2
 3.0
1.5
 7.7
 7.1
 6.4
 7.2
4.7
34 FRO1 NADH-ubiquinone oxidoreductase-like protein 836895 At5g67590 7.8 7.4
 6.1
 40.6
 3.2
 3.3
 1.0
 2.0
 0.1
 4.3
 3.9
3.7
 3.9
3.9
 6.2
-2.1
 10.5
 4.7
 6.9
35 AT4G30010 ATP-dependent RNA helicase 829124 At4g30010 7.7 6.7
 6.6
 56.0
 3.1
 2.5
 1.9
 2.3
 1.0
 2.4
 4.1
2.3
 4.4
2.7
 5.5
3.6
 9.0
 7.5
 7.4
36 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 839195 At1g26550 7.6 9.2
 3.9
 22.6
 3.1
 4.3
 2.6
 2.2
 0.2
 1.7
 4.9
1.7
 3.5
1.6
 1.8
 5.8
 4.4
 4.0
37 FBR12 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein 839203 At1g26630 7.5 7.0
 5.9
 189.3
 2.3
 2.3
 0.7
 1.1
 0.9
 5.9
 4.8
3.9
 5.1
3.5
 5.4
5.0
 3.9
3.8
 5.0
2.9
 3.4
2.8
38 AT1G14450 NADH dehydrogenase (ubiquinone)s 838007 At1g14450 7.4 7.1
 5.7
 15.5
 2.7
 4.5
 3.2
 2.3
 0.7
 5.6
 4.5
 3.5
 6.5
 6.2
 8.5
 4.1
39 AT3G46430 ATP synthase 823793 At3g46430 7.3 7.0
 5.7
 17.0
 3.6
 3.8
 3.3
 2.8
 0.9
 3.5
 3.5
3.5
 3.2
3.1
 5.2
4.9
 7.4
6.8
 7.0
6.0
 9.2
40 AT2G02510 NADH dehydrogenase (ubiquinone)s 814780 At2g02510 7.3 8.4
 4.1
 53.9
 3.1
 3.7
 2.2
 2.3
 2.0
 3.9
 4.5
 3.5
 6.5
 6.2
 8.5
 4.1
41 ATPQ ATP synthase D chain 824395 At3g52300 7.3 7.6
 5.0
 13.7
 2.4
 5.3
 1.8
 2.4
 0.5
 5.0
 2.5
2.3
 2.7
2.3
 5.8
3.3
 10.2
 7.2
 10.3
42 AT4G00585 uncharacterized protein 828026 At4g00585 7.2 6.2
 6.3
 21.5
 3.2
 4.2
 2.9
 2.3
 1.5
 4.5
 6.3
4.1
 6.1
3.7
 7.1
5.6
 8.1
 7.3
 7.8
43 NRPB11 DNA-directed RNA polymerase, RBP11-like protein 824372 At3g52090 7.2 6.5
 5.8
 51.4
 1.9
 3.2
 1.9
 2.9
 -0.2
 1.5
 2.5
 2.2
 2.2
 3.6
 3.4
 1.9
44 ATOZI1 monopolar spindle protein (DUF1138) 826213 At4g00860 7.0 7.0
 5.2
 165.9
 2.7
 3.0
 2.1
 0.9
 -0.2
 5.5
 4.5
2.8
 5.1
2.4
 5.9
 6.0
5.9
 8.4
1.9
 5.4
1.8
45 AT2G25610 ATPase, F0/V0 complex, subunit C protein 817101 At2g25610 7.0 7.1
 5.1
 39.0
 -0.2
 2.2
 2.6
 3.3
 -0.3
 4.3
 2.6
1.5
 3.0
1.6
 4.6
1.7
 3.3
 5.6
2.8
 3.3
46 AT1G05205 hexokinase-1 protein 839266 At1g05205 7.0 5.5
 6.6
 15.4
 2.7
 4.5
 4.3
 2.5
 1.0
 2.1
 6.0
1.6
 5.0
2.0
 3.3
 7.2
 3.6
 3.7
47 AT3G18410 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6) 821370 At3g18410 7.0 7.4






2.2
 4.1
2.3
 4.3
3.0
 7.6
1.8
 5.7
 7.4
 8.3
48 SPR1 spiral1 814896 At2g03680 7.0 7.2
 4.8
 76.4
 2.6
 3.8
 1.1
 1.4
 3.0
 4.1





49 AT2G20820 uncharacterized protein 816613 At2g20820 7.0 7.1
 5.0
 42.0
 3.0
 3.7
 1.3
 1.9
 2.2
 7.2
 2.5
2.4
 2.8
2.5
 7.6
6.9
 7.8
7.7
 7.2
2.8
 10.2
50 AT2G20360 NAD(P)-binding Rossmann-fold superfamily protein 816555 At2g20360 6.9 7.4
 4.6
 95.0
 2.8
 2.5
 1.7
 3.0
 0.5
 3.4
 3.5
 3.2
 6.4
2.1
 6.6
 5.7
 6.5
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