Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-r.6   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.9   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.notissue   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.tis   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.str   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.hor   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.bio   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-m.4.lig   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-e.1   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-u.4   AT1G52770   Phototropic-responsive NPH3 family protein 
 gma-u.4   100777820   root phototropism protein 3-like 
 gma-u.4   100777676   coleoptile phototropism protein 1 
 ppo-u.4   18094739   root phototropism protein 3 
 ppo-u.4   7478376   root phototropism protein 3 
 mtr-u.4   25491354   root phototropism protein 3 
 mtr-u.4   11433561   root phototropism protein 3 
 sly-u.4   101254886   root phototropism protein 3-like 
 osa-u.4   4326222   coleoptile phototropism protein 1-like 

close


Top 50 coexpressed genes to AT3G15570 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath51   Fructose and mannose metabolism  2 53 2.10
 ath30   Pentose phosphate pathway  2 58 2.02
 ath710   Carbon fixation in photosynthetic organisms  2 69 -
 ath10   Glycolysis / Gluconeogenesis  2 119 -
 ath1200   Carbon metabolism  2 273 -

close


ath:AT3G15570 (Phototropic-responsive NPH3 family protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G15570
ath-r.6
for
AT3G15570
ath-m.9
for
AT3G15570
ath-m.4.notissue
for
AT3G15570
ath-m.4.tis
for
AT3G15570
ath-m.4.str
for
AT3G15570
ath-m.4.hor
for
AT3G15570
ath-m.4.bio
for
AT3G15570
ath-m.4.lig
for
AT3G15570
ath-e.1
for
AT3G15570
ath-u.4
for
AT1G52770
gma-u.4
for
100777820
gma-u.4
for
100777676
ppo-u.4
for
18094739
ppo-u.4
for
7478376
mtr-u.4
for
25491354
mtr-u.4
for
11433561
sly-u.4
for
101254886
osa-u.4
for
4326222
1 AT4G34220 Leucine-rich repeat protein kinase family protein 829571 At4g34220 7.6 7.0
 6.2
 3.0
 1.6
 3.5
 4.0
 4.1
 3.1
 4.8
 0.4
-0.0
 1.3
1.1
 0.5
-0.5
 0.3
-0.0
 0.4
-0.3
 0.5
0.5
 1.0
-0.5
 1.1
0.0
 1.6
1.5
2 AT3G18050 GPI-anchored protein 821330 At3g18050 7.0 7.9
 4.3
 1.4
 2.2
 4.5
 3.4
 5.1
 0.2
 3.1
 0.4
 1.0
0.8
 4.0
3.0
 1.3
1.2
 1.2
1.0
 0.3
 0.8
 2.2
-0.4
3 AT5G16030 mental retardation GTPase activating protein 831460 At5g16030 6.7 6.1
 5.5
 10.4
 2.2
 3.7
 3.0
 3.3
 3.0
 3.3
 -0.3
-1.5
 1.4
1.4
 3.9
3.7
 1.3
0.5
 1.3
0.1
 1.0
-0.5
 1.9
0.3
 2.0
0.2
4 AT1G50280 Phototropic-responsive NPH3 family protein 841450 At1g50280 6.2 5.6
 5.1
 11.3
 2.6
 2.9
 1.9
 4.3
 1.7
 5.3
 1.1
-0.5
 1.5
0.1
 0.1
-0.1
 -0.9
 1.1
 0.5
0.3
 0.7
0.1
 2.4
 1.5
5 AT1G54820 Protein kinase superfamily protein 841921 At1g54820 5.9 5.4
 4.9
 1.0
 1.8
 5.5
 2.4
 5.1
 2.5
 4.9
 0.9
 0.2
-0.6
 0.5
0.4
 1.2
1.1
 0.7
0.6
 -0.0
 0.7
 1.7
 2.3
6 AT3G17640 Leucine-rich repeat (LRR) family protein 821031 At3g17640 5.7 5.7
 4.3
 2.2
 1.6
 4.5
 2.4
 5.1
 -0.6
 5.3
 1.6
 0.4
 -0.9
 -0.8
 1.1
 -0.2
 -0.4
 1.3
7 AT5G54630 zinc finger protein-like protein 835552 At5g54630 5.3 3.9
 5.3
 11.9
 1.4
 2.7
 4.9
 4.4
 1.9
 2.5
 0.6
0.3
 0.3
-0.1
 2.3
1.8
 2.0
0.1
 0.7
-0.2
 0.6
 0.7
 1.0
0.7
 1.5
0.8
8 AT4G01460 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 828089 At4g01460 4.8 4.7
 3.6
 231.6
 2.0
 3.3
 1.1
 2.0
 0.9
 1.5
 1.7







9 NDF5 NDH-dependent cyclic electron flow 5 841984 At1g55370 4.7 3.7
 4.4
 22.2
 3.6
 4.4
 1.9
 3.9
 2.6
 0.7
 0.9
 0.5
 2.7
 0.1
 2.2
 0.1
 -0.4
 1.6
 0.4
10 OFP16 ovate family protein 16 817770 At2g32100 4.5 3.9
 3.9
 289.0
 2.9
 2.5
 1.4
 2.3
 1.8
 3.2
 0.7
-1.3
 0.2
0.1
 -0.8
-0.9

0.3
0.1
 0.5
0.0
 -0.2
 1.9
11 PIF4 phytochrome interacting factor 4 818903 At2g43010 4.5 3.5
 4.2
 511.4
 2.2
 1.9
 1.3
 1.8
 2.5
 3.0
 -1.0
-1.2
 0.3
-0.0
 1.0
0.3
 0.7
-0.0
 0.9
-0.0
 -0.1
 1.1
 1.0
12 FBA5 Aldolase superfamily protein 828759 At4g26530 4.5 3.3
 4.4
 37.2
 3.2
 4.7
 1.0
 3.1
 1.3
 1.8
 1.8
1.7
 0.6
0.2
 0.9
0.4
 0.9
0.7
 1.1
0.0
 0.4
0.2
 -0.1
-0.4
 1.9
-2.0
 1.2
0.2
13 IDD4 indeterminate(ID)-domain 4 814739 At2g02080 4.4 3.2
 4.5
 73.9
 1.5
 1.8
 1.6
 2.2
 1.6
 5.3
 0.4
-0.5
 2.9
2.9
 1.2
1.1
 3.5
1.3
 3.7
1.2
 1.5
1.4
 1.3
1.1
2.0
1.6
14 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein 827503 At4g17810 4.4 5.3
 2.3
 71.9
 2.6
 2.6
 2.8
 2.7
 2.2
 3.6
 -0.2
 0.6
-0.3
 2.0
1.5





15 ESM1 GDSL-like lipase/acylhydrolase superfamily protein 820639 At3g14210 4.3 3.1
 4.4
 397.4
 2.5
 2.5
 1.1
 1.8
 2.1
 0.8
 0.7







16 MIR167d 28717283 At1g31173 4.3 4.4






2.8








17 AT2G29290 NAD(P)-binding Rossmann-fold superfamily protein 817478 At2g29290 4.2 3.2
 4.2
 7.5
 3.6
 3.6
 2.0
 4.9
 2.5
 0.1
 1.3
1.1
 2.2
2.1
 2.9
0.5
 2.0
0.8
 1.2
1.2
 1.5
0.8
 0.5
0.5
 2.8
0.3
 0.3
-0.1
18 SIG4 sigma factor 4 831218 At5g13730 4.2 3.6
 3.7
 54.3
 2.8
 3.3
 1.2
 2.7
 1.5
 0.9
 2.5

0.0
 1.0
 0.6
 0.6
 2.2
19 HBI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 816346 At2g18300 4.2 3.1
 4.2
 8.8
 2.3
 4.5
 3.3
 3.4
 2.2
 2.4
 -0.1
-0.8







20 AT2G03310 uncharacterized protein 814860 At2g03310 4.1 3.2
 4.0
 98.1
 2.1
 3.7
 1.2
 2.5
 -0.6
 2.8
 -0.2
 0.3
 2.5
 1.7
 0.7
 0.1
 0.7
 0.4
21 TCP4 TCP family transcription factor 4 820732 At3g15030 4.1 3.5
 3.6
 86.5
 2.3
 2.0
 1.5
 3.3
 1.5
 2.5
 1.9
1.5
 2.6
2.4
 3.0
2.4
 3.2
0.6
 1.0
0.8
 1.3
0.4
 1.7
1.6
 2.3
1.5
 1.6
22 ZFP8 zinc finger protein 8 818794 At2g41940 4.1 3.3
 3.8
 733.4
 2.4
 1.3
 2.1
 1.3
 1.0
 0.5
 4.1
1.6
 2.2
1.4
 3.7
2.2
 1.0
0.4
 3.2
2.4
 0.3
 1.6
 1.5
0.0
 1.5
1.2
23 KNAT4 homeobox protein knotted-1-like 4 830973 At5g11060 4.1 3.6
 3.5
 1887.9
 1.4
 0.9
 0.5
 0.9
 2.1
 3.7
 1.1
0.2
 1.9
1.5
 0.0
-0.1
 2.2
1.3
 1.3
0.9
 0.3
-0.3
 1.2
0.9
 1.4
0.6
 0.5
0.1
24 MAP70-4 microtubule-associated proteins 70-4 838049 At1g14840 4.1 4.2
 2.9
 56.9
 1.0
 1.6
 4.3
 3.6
 2.1
 0.9
 0.8
0.5
 0.4
0.3
 1.5
1.0
 2.2
1.5
 0.9
0.8
 0.4
0.1
 0.6
0.3
 1.6
0.3
 0.5
0.4
25 FBA7 Aldolase superfamily protein 828758 At4g26520 4.0 4.1
 2.9
 50.7
 1.9
 3.1
 1.6
 3.2
 1.2
 0.1
 1.8
1.7
 0.6
0.2
 0.9
0.4
 0.9
0.7
 1.1
0.0
 0.4
0.2
 -0.1
-0.4
 1.9
-2.0
 1.2
0.2
26 NCED4 nine-cis-epoxycarotenoid dioxygenase 4 827655 At4g19170 4.0 3.8
 3.1
 476.1
 1.3
 3.1
 1.4
 1.8
 1.4
 3.4
 -0.9
 -1.1
 0.6
 0.3
0.2
 0.4
-1.0
 1.1
 1.6
 0.5
 0.7
-1.4
27 MES12 methyl esterase 12 826580 At4g09900 4.0 3.3
 3.5
 67.7
 1.5
 1.0
 2.3
 3.3
 1.4
 3.3
 0.3
-1.1
 0.3
-1.0
 -1.4
-1.5
 0.9
-0.6
 -0.3
-0.5
 -0.2
 0.7
 -1.2
 0.2
28 AT1G68780 RNI-like superfamily protein 843209 At1g68780 3.9 3.6
 3.1
 88.5
 1.3
 3.1
 2.1
 2.2
 2.8
 0.7
 -0.8
-0.9
 1.3
0.4
 0.4
0.4



2.2
-0.4
 1.1
29 SCRM2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837843 At1g12860 3.9 4.0
 2.8
 12.7
 1.5
 2.2
 2.2
 5.2
 2.5
 3.0
 0.9
0.4
 0.9
0.6
 2.6
2.2
 1.1
-0.2
 2.3
0.6
 0.2
-0.2
 0.7
0.2
 2.7
1.4
 1.4
1.1
30 AT1G70820 phosphoglucomutase, putative / glucose phosphomutase 843419 At1g70820 3.9 2.9
 3.7
 188.3
 3.0
 3.1
 1.3
 2.7
 -0.1
 2.2
 2.3
 -0.5
 1.2
 1.6
 1.9
 0.4
 0.3
 2.5
 -0.5
31 AT3G13690 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein 820578 At3g13690 3.9 3.2
 3.4
 12.2
 0.7
 4.0
 2.3
 4.2
 1.2
 2.7
 -0.3
-0.6
 1.4
1.0
 1.2
0.6
 0.2
-0.5
 0.5
0.4
 0.8
-0.2
 0.4
-0.3
 2.4
2.2
 0.9
0.6
32 iqd21 IQ-domain 21 824087 At3g49260 3.8 3.5
 3.0
 8.9
 2.6
 5.1
 2.8
 2.9
 1.5
 1.8
 0.7
 1.9
1.7
 2.4
2.3
 0.4
-0.1
 1.8
-0.7
 0.7
-0.7
 0.7
0.2
 1.9
1.8
33 PHOT1 phototropin 1 823721 At3g45780 3.7 3.9
 2.6
 80.9
 2.0
 2.0
 2.6
 3.7
 0.8
 5.4
 -0.8
 0.9
0.8
 2.0
1.7
 -0.4
 0.6
 1.8
0.1
 2.8
1.6
 0.1
 -0.0
-0.0
34 PIL5 phytochrome interacting factor 3-like 5 816538 At2g20180 3.7 2.9
 3.5
 181.6
 2.2
 2.0
 4.4
 3.0
 2.7
 4.2
 -1.0
 1.2
0.6
 1.4
0.8
 0.2
 0.5
 1.4
0.7
 1.4
-0.0
 -0.0
-0.1
35 CAF2 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 838948 At1g23400 3.7 2.5
 3.8
 7.3
 2.9
 3.6
 3.6
 3.8
 2.2
 3.5
 0.4
 0.3
 3.2
 0.8
 0.4
 -0.1
 -0.1
 1.6
 -1.3
36 AT4G19530 disease resistance protein (TIR-NBS-LRR class) family 827695 At4g19530 3.6 3.4
 2.9
 698.5
 3.0
 2.8
 2.7
 2.0
 0.1
 -0.5








37 AT5G05890 UDP-Glycosyltransferase superfamily protein 830474 At5g05890 3.6 3.3
 3.0
 122.2
 0.4
 2.1
 2.3
 3.3
 1.8
 -0.2
 2.3
0.5
 -0.8
-0.9
 0.7
-1.6
 1.3
0.5
 0.2
-0.9
 0.4
-0.8
 1.1
0.8
 0.1
-0.3
 1.4
0.9
38 CRK22 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 828429 At4g23300 3.6 2.5
 3.8
 573.6
 2.7
 2.7
 1.5
 1.0
 -0.0
 1.8
 0.9
-0.1







39 AT1G07280 Tetratricopeptide repeat (TPR)-like superfamily protein 837239 At1g07280 3.6 3.6
 2.6
 396.4
 1.8
 2.9
 0.5
 1.9
 -0.1
 3.2
 1.2
0.9
 1.5
1.0
 0.3
-0.0
 1.5
1.4
 1.1
0.7
 0.4
 1.5
 0.0
 -0.7
-0.9
40 GPRI1 GBF's pro-rich region-interacting factor 1 816579 At2g20570 3.6 2.5
 3.8
 151.0
 3.0
 2.7
 1.2
 1.7
 2.1
 1.8
 1.1
-0.4
 1.5
1.4
 2.4
1.7
 1.1
0.4
 3.6
1.8
 1.2
0.8
 0.8
0.6
 0.9
0.2
 1.5
0.4
41 CRR42 DUF3148 family protein 832218 At5g20935 3.6 3.0
 3.2
 70.1
 4.0
 2.3
 1.6
 2.3
 2.7
 1.9
 1.4
 1.8
1.8
 1.3
0.1
 1.4
 0.4
 -0.0
 0.6
 1.3
 -0.2
42 MDA1 Mitochondrial transcription termination factor family protein 827109 At4g14605 3.6 3.3
 2.9
 334.2
 2.0
 2.1
 1.7
 1.5
 1.1
 5.1
 -0.6
 1.8
1.0
 2.9
0.9
 -0.2
 -0.2
 0.2
 0.7
 0.7
 0.2
43 AT3G19850 Phototropic-responsive NPH3 family protein 821522 At3g19850 3.6 3.6
 2.6
 31.9
 2.5
 3.3
 2.8
 2.7
 2.0
 1.8
 1.1
-0.5
 1.5
0.1
 0.1
-0.1
 -0.9
 1.1
 0.5
0.3
 0.7
0.1
 2.4
 1.5
44 bHLH071 beta HLH protein 71 834712 At5g46690 3.6 3.4
 2.8
 34.5
 1.2
 3.3
 1.5
 3.2
 2.1
 2.5
 0.5
 0.9
0.7
 3.9
2.7
 1.5
-0.3
 2.7
0.8
 -0.0
 1.0
 2.1
 1.9
1.0
45 AT2G21380 Kinesin motor family protein 816676 At2g21380 3.6 3.6
 2.6
 150.0
 1.4
 1.6
 2.5
 3.0
 0.6
 3.2
 0.1
-0.9
 -0.8
-1.3
 0.9
0.1
 1.1
-0.5
 -0.2
-0.6
 0.4
0.1
 -0.2
-0.3
 -0.1
-0.7
 1.3
46 BGLU8 beta glucosidase 8 825450 At3g62750 3.6 3.5






-0.1
 1.6
1.5
 2.4
2.3
 1.1
0.6

1.3
1.0
 0.5
0.2
 0.6
-0.1
 0.7
0.6
47 IDD5 indeterminate(ID)-domain 5 814738 At2g02070 3.6 3.6
 2.5
 38.3
 1.8
 2.4
 3.3
 3.2
 2.8
 2.2
 1.0







48 AT3G28040 Leucine-rich receptor-like protein kinase family protein 822428 At3g28040 3.5 3.8
 2.4
 19.3
 1.5
 2.1
 4.6
 3.7
 3.4
 5.0
 0.8
 5.0
4.2
 2.5
1.7
 2.6
2.1
 2.1
-0.1
 2.2
 2.0
 1.4
 4.0
49 TRM3 LONGIFOLIA protein 838443 At1g18620 3.5 3.4
 2.7
 53.0
 1.7
 3.5
 2.9
 2.6
 0.5
 3.9
 0.0
-2.1
 1.4
1.3
 2.6
1.3
 0.5
-0.0
 3.0
0.8
 0.1
 -0.2
 1.0
0.8
 1.7
50 AT5G44680 DNA glycosylase superfamily protein 834497 At5g44680 3.5 3.8
 2.3
 56.3
 1.5
 3.9
 2.3
 2.4
 1.1
 -0.0
 -1.0
-1.0
 -1.6
-1.7
 2.8
1.7
 2.2
0.9
 1.9
1.5
 0.4
0.3
 -0.0
-0.9
 2.1
0.1
 1.8
The preparation time of this page was 0.8 [sec].