Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-r.6   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.9   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.notissue   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.tis   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.str   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.hor   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.bio   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.lig   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-e.1   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.4   PAM1   plant adhesion molecule 1 
 gma-u.4   100792187   ecotropic viral integration site 5 protein homolog 
 gma-u.4   100778662   Rab-GTPase-TBC domain-containing protein 
 ppo-u.4   18107430   ecotropic viral integration site 5 protein homolog 
 ppo-u.4   7468375   EVI5-like protein 
 mtr-u.4   25495518   EVI5-like protein 
 sly-u.4   101262565   putative plant adhesion protein 
 osa-u.4   4345560   EVI5-like protein 

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Top 50 coexpressed genes to AT3G02460 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3015   mRNA surveillance pathway  4 115 3.69
 ath240   Pyrimidine metabolism  1 64 -
 ath562   Inositol phosphate metabolism  2 79 -
 ath4144   Endocytosis  2 158 -
 ath500   Starch and sucrose metabolism  1 172 -

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ath:AT3G02460 (Ypt/Rab-GAP domain of gyp1p superfamily protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G02460
ath-r.6
for
AT3G02460
ath-m.9
for
AT3G02460
ath-m.4.notissue
for
AT3G02460
ath-m.4.tis
for
AT3G02460
ath-m.4.str
for
AT3G02460
ath-m.4.hor
for
AT3G02460
ath-m.4.bio
for
AT3G02460
ath-m.4.lig
for
AT3G02460
ath-e.1
for
AT3G02460
ath-u.4
for
PAM1
gma-u.4
for
100792187
gma-u.4
for
100778662
ppo-u.4
for
18107430
ppo-u.4
for
7468375
mtr-u.4
for
25495518
sly-u.4
for
101262565
osa-u.4
for
4345560
1 AT1G10720 BSD domain-containing protein 837615 At1g10720 6.4 5.5
 5.7
 1.0
 3.9
 2.1
 2.7
 4.4
 0.1
 3.4
 2.2
1.8
 2.1
2.1
 3.9
2.8
 1.2
-0.2
 1.4
1.2
 2.7
1.6
 3.0
1.5
 0.3
0.2
2 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 841466 At1g50440 6.3 5.7
 5.3
 19.8
 1.9
 2.5
 2.0
 2.5
 -0.4
 1.4
 4.8
 1.1
0.4
 0.6
-0.2
 0.9
 0.2
 1.7
 0.3
 2.5
3 AT1G14560 Mitochondrial substrate carrier family protein 838018 At1g14560 5.9 6.5
 3.7
 630.0
 1.4
 0.7
 2.3
 2.8
 0.0
 3.6
 2.5
 2.8
1.7
 0.4
-0.0
 0.9
 3.3
 1.0
 0.5
 2.5
0.6
4 AT4G19140 exopolysaccharide production negative regulator 827652 At4g19140 5.8 5.9
 4.1
 316.6
 0.7
 0.8
 2.4
 4.2
 -0.4
 7.2
 3.2
 1.5
1.5
 -0.9
-1.1
 0.7
-0.5
 1.0
0.7
 1.5
 0.4
 -0.1
5 AT1G28240 strawberry notch protein (DUF616) 839718 At1g28240 5.8 4.9
 5.0
 1.7
 3.0
 3.7
 1.6
 4.6
 1.7
 1.6
 2.9
2.7
 1.5
0.6
 0.2
0.2
 1.1
0.1
 1.9
1.3
 0.1
0.0
 2.3
2.1
 1.0
0.8
6 AT2G04305 Magnesium transporter CorA-like family protein 814969 At2g04305 5.8 6.3
 3.7
 414.9
 2.6
 0.6
 2.2
 2.7
 2.1
 4.7
 3.3
 0.6
-0.0
 0.6
0.5
 -0.0
 1.0
 1.0
 2.8
 0.8
7 PP2A serine/threonine protein phosphatase 2A 843333 At1g69960 5.7 5.1
 4.8
 50.3
 1.3
 2.6
 2.0
 1.9
 -0.2
 1.0
 2.9
1.5
 1.2
1.1
 3.7
1.7
 2.5
1.4
 2.6
2.5
 2.2
1.7
 3.2
2.6
 1.7
1.6
8 PAM1 plant adhesion molecule 1 831450 At5g15930 5.4 4.7
 4.7
 535.1
 0.2
 0.6
 3.7
 1.7
 -0.8
 3.8
 5.4
 1.9
 1.9
 4.2
 4.2


9 CPK6 Calcium-dependent protein kinase family protein 816235 At2g17290 5.3 5.5
 3.7
 106.3
 5.3
 2.0
 2.6
 2.3
 2.4
 3.1
 2.6
0.7
 1.2
1.0
 0.9
0.4
 0.0
-0.4
 1.3
0.2
 1.8
 2.1
-0.2
 2.3
1.4
10 AT5G39250 F-box family protein 833921 At5g39250 5.3 5.3
 3.8
 270.0
 2.4
 2.7
 0.0
 1.9
 0.9
 4.4
 3.9
 0.3
0.1
 2.8
0.4
 1.5
0.4
 2.3
1.6
 2.5
 1.8
 1.9
11 AT5G42320 Zn-dependent exopeptidases superfamily protein 834237 At5g42320 5.3 4.9
 4.2
 275.7
 -0.2
 2.5
 2.8
 2.2
 -0.6
 3.3
 2.6
 1.6
1.1
 0.7
0.4
 1.6
1.5
 2.2
1.9
 3.6
 1.7
 0.9
12 EDL2 EID1-like 2 833932 At5g39360 5.2 5.4
 3.7
 29.8
 0.1
 1.8
 1.0
 3.8
 -0.2
 4.3
 2.6
0.6
 0.4
0.3
 1.2
0.8
 1.8
-0.6
 2.5
-0.0
 3.2
1.1
 0.7
 0.9
0.1
13 ckl8 casein kinase I-like 8 834350 At5g43320 5.2 4.8
 4.2
 587.4
 2.6
 2.0
 1.5
 -0.0
 0.2
 0.8
 2.0
1.7
 2.5
1.6
 3.5
2.5
 0.5
0.3
 1.8
1.2
 3.3
2.5
 2.2
1.5
 2.2
0.4
14 ITPK1 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 831539 At5g16760 5.2 4.9
 4.2
 758.5
 0.0
 2.3
 0.8
 2.0
 -0.4
 3.2
 1.9
 2.1
-0.3
 0.7
0.2
 1.6
-1.1
 0.8
-1.3
 2.0
 1.1
0.8
 -0.5
15 MGT2 magnesium transporter 2 838171 At1g16010 5.1 4.7
 4.2
 1102.3
 0.2
 0.6
 2.3
 3.0
 -0.7
 2.0
 2.5
1.8
 0.2
-0.4
 2.1
0.9
 2.0
0.5
 2.7
1.2
 0.1
 -0.2
 1.1
16 URH1 uridine-ribohydrolase 1 818204 At2g36310 5.0 4.5
 4.2
 9.8
 1.6
 1.9
 3.4
 3.2
 0.5
 0.6
 2.0
 0.7
 0.7
 -0.0
 1.8
 -0.1
 0.2
-0.8
 0.0
-0.5
17 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein 837906 At1g13460 5.0 4.1
 4.4
 2022.0
 1.4
 1.8
 1.6
 -0.5
 -0.5
 2.9
 3.6
2.3
 2.1
1.6
 1.7
1.7
 1.4
1.2
 2.6
2.0
 2.9
2.7
 0.9
0.6
 2.6
1.1
18 TOPP2 type one serine/threonine protein phosphatase 2 836034 At5g59160 4.9 4.9
 3.6
 1758.4
 0.5
 2.6
 0.4
 0.1
 0.7
 2.2
 2.9
2.7
 2.1
1.4
 1.9
1.9
 1.7
1.3
 2.7
2.2
 1.7
1.5
 4.3
1.9
 3.0
0.6
19 AT2G26600 Glycosyl hydrolase superfamily protein 817201 At2g26600 4.9 4.1
 4.4
 976.0
 1.6
 2.5
 1.8
 0.1
 -0.5
 2.5
 1.7
0.3
 -0.7
 -1.0
 1.4
0.6
 1.4
0.4
 1.0
0.5
 -0.5
 0.6
0.1
20 LAG13 LAG1 longevity assurance-like protein 837919 At1g13580 4.9 4.4
 4.0
 167.8
 -0.9
 3.4
 1.2
 1.6
 -1.0
 4.1
 2.8
2.0
 2.1
0.3
 1.2
0.4
 2.0
-0.8
 2.9
0.8
 1.1
0.7
 2.4
 2.8
2.1
21 TOM3 tobamovirus multiplication protein 3 814749 At2g02180 4.9 5.0
 3.4
 113.3
 3.3
 0.2
 1.9
 4.6
 1.9
 4.3
 2.3
1.8
 1.5
0.5
 3.0
2.0

1.3
0.6
 0.8
0.7
 1.7
0.7
22 CBL3 calcineurin B-like 3 828764 At4g26570 4.9 4.6
 3.8
 393.2
 0.9
 1.4
 1.8
 1.6
 1.4
 1.8
 2.7
2.1
 2.5
1.2
 1.8
1.2
 0.6
0.5
 2.9
2.2
 1.6
1.4
 2.9
1.6
 2.5
1.7
23 AT3G11320 Nucleotide-sugar transporter family protein 820304 At3g11320 4.8 3.9
 4.4
 202.9
 1.6
 2.5
 0.7
 1.9
 0.4
 4.0
 3.1
2.4
 1.0
0.9
 1.1
1.1
 -0.4
-1.0
 -0.0
-0.0
 0.5
0.2
 3.1
 1.8
24 AT3G12620 Protein phosphatase 2C family protein 820442 At3g12620 4.7 4.3
 3.9
 285.8
 2.0
 0.6
 3.4
 1.9
 1.3
 3.2
 5.1
3.1
 1.0
0.9
 2.3
2.1
 1.3
1.2
 3.5
1.5
 1.8
1.8
 2.7
1.6
 2.2
0.8
25 AT2G02870 Galactose oxidase/kelch repeat superfamily protein 814818 At2g02870 4.7 4.1
 4.1
 940.5
 1.6
 0.9
 1.4
 1.3
 1.4
 2.8
 2.1
1.4
 1.6
0.7
 1.2
0.1
 0.5
 -0.0
 0.9
0.2
 1.0
0.5
 1.6
1.2
26 AT2G32760 UV radiation resistance-associated protein 817836 At2g32760 4.7 4.5
 3.6
 1765.3
 0.2
 0.2
 0.8
 2.0
 0.1
 2.9
 3.3
 1.7
0.3
 1.4
0.8
 1.3
 1.2
 1.3
 1.0
 3.0
27 PANK1 pantothenate kinase 1 842339 At1g60440 4.7 3.7
 4.4
 655.2
 1.0
 0.7
 3.1
 0.8
 -1.1
 1.6
 1.3
 2.4
1.3
 1.0
-0.1
 1.7
0.8
 1.2
1.1
 1.2
 -0.1
28 SYP52 syntaxin of plants 52 844297 At1g79590 4.7 4.4
 3.7
 354.8
 4.7
 1.5
 0.8
 1.8
 2.2
 2.7
 2.9
0.6
 0.8
0.8
 2.8
2.4
 2.1
0.7
 3.0
1.8
 2.5
2.0
 2.2
1.7
 1.3
-0.3
29 CRLK2 Protein kinase superfamily protein 831429 At5g15730 4.6 4.8
 3.2
 558.7
 1.1
 1.1
 2.2
 1.5
 0.2
 2.0
 1.6
 4.2
2.5
 0.2
-0.0
 1.9
0.5
 2.4
1.8
 1.8
 2.6
 1.5
30 AT4G32140 EamA-like transporter family 829346 At4g32140 4.6 5.4
 2.6
 246.4
 1.0
 1.2
 1.7
 2.4
 1.6
 3.6
 2.3
 2.0
1.5
 2.3
2.0
 2.3
0.9
 1.4
1.3
 1.6
 0.5
 0.7
31 AT5G09890 Protein kinase family protein 830849 At5g09890 4.6 4.4
 3.6
 125.5
 1.1
 1.3
 1.7
 3.8
 2.3
 3.2
 1.5
 1.0
0.8
 0.2
0.1
 0.1
 -0.1
 0.5
 1.4
1.3
32 APRL6 APR-like 6 826471 At4g08930 4.6 3.6
 4.3
 35.9
 2.2
 2.0
 2.3
 3.2
 0.2
 3.1
 0.6
0.1
 0.2
0.2
 3.3
3.0
 1.6
-1.1
 2.1
-0.3
 1.6
 1.0
 0.9
-0.9
33 AT3G55050 Protein phosphatase 2C family protein 824671 At3g55050 4.6 4.4
 3.5
 1079.8
 1.1
 0.2
 4.0
 2.7
 -0.2
 2.9
 5.1
3.1
 1.0
0.9
 2.3
2.1
 1.3
1.2
 3.5
1.5
 1.8
1.8
 2.7
1.6
 2.2
0.8
34 TPS7 trehalose-phosphatase/synthase 7 837152 At1g06410 4.6 4.7
 3.2
 15.9
 0.6
 1.7
 3.0
 3.3
 0.2
 3.4
 3.0
 1.1
0.9
 0.6
0.4
 2.0
1.0
 1.0
0.2
 0.3
 2.6
0.8
 2.2
1.7
35 AT4G10140 uncharacterized protein 826605 At4g10140 4.6 4.7
 3.2
 1012.5
 3.3
 0.3
 1.0
 1.8
 0.8
 0.8
 2.6
1.4
 1.4
1.2
 3.4
3.2
 0.9
0.0
 1.7
0.3
 1.6
0.8
 0.7
-1.1
 0.1
36 Cand1 plasminogen activator inhibitor 842144 At1g57680 4.5 3.5
 4.3
 250.0
 1.4
 1.7
 1.1
 1.8
 2.3
 2.4
 2.4
 0.3
-0.2
 1.6
0.9
 -0.1
-0.2
 1.3
0.5
 0.7
 2.5
 1.0
0.9
37 AT3G10540 3-phosphoinositide-dependent protein kinase 820219 At3g10540 4.5 4.0
 3.8
 1325.5
 0.6
 3.4
 1.6
 -0.2
 1.2
 2.5
 3.7
2.9
 -0.1
-0.7
 1.4
1.1
 1.2
1.0
 2.0
1.8
 2.1
 1.2
0.4
 -0.3
38 AT4G30060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 829129 At4g30060 4.5 3.9
 3.8
 145.1
 2.8
 1.6
 1.4
 2.5
 2.3
 2.2
 1.2
1.2
 2.4
2.2
 0.4
0.4
 -0.2
-0.6
 1.4
0.9
 1.0
-0.4
 0.1
 1.8
1.3
39 MAP3KA mitogen-activated protein kinase kinase kinase 3 841792 At1g53570 4.5 4.4
 3.4
 110.4
 2.3
 1.0
 2.7
 2.7
 0.8
 2.7
 0.3
 0.5
-0.3
 1.2
1.0
 2.4
1.3
 2.2
1.8
 2.2
1.0
 3.4
 1.8
40 AT3G28430 CLEC16A-like protein 822473 At3g28430 4.5 4.3
 3.5
 3236.9
 0.9
 0.2
 0.9
 1.8
 0.5
 2.9
 2.0
 -0.0
-0.3
 1.0
0.0
 2.5
2.4
 1.6
1.5
 1.9
0.8
 0.5
 1.9
41 ARLA1D ADP-ribosylation factor-like A1D 836892 At5g67560 4.5 4.6
 3.1
 1359.8
 1.3
 3.5
 0.4
 0.5
 1.3
 3.2
 3.8
2.3
 2.0
0.4
 2.5
1.6
 1.8
0.5
 2.8
1.9
 0.5
0.4
 2.2
1.6
 1.0
0.8
42 RABA2D RAB GTPase homolog A2D 836033 At5g59150 4.5 4.9
 2.8
 110.8
 1.5
 4.2
 1.8
 1.2
 5.7
 3.3
 1.9
0.9
 1.2
-0.0
 -0.7
-1.6
 -0.1
-1.5
 -0.5
-0.9
 -0.6
 2.7
1.0
 1.5
0.2
43 AT5G53310 myosin heavy chain-like protein 835412 At5g53310 4.5 4.9
 2.8
 93.0
 2.7
 1.3
 1.8
 4.1
 -0.1
 3.2
 2.8
 1.0
1.0
 0.3
-0.5
 0.4
0.2
 2.9
0.1
 0.9
 3.6
2.4
 3.1
44 AT3G10915 Reticulon family protein 820262 At3g10915 4.4 4.5






2.8
 1.7
 1.4
0.8
 1.9
0.8
 1.0
 1.8
 2.4
 2.5
 1.5
45 AT1G69340 appr-1-p processing enzyme family protein 843266 At1g69340 4.4 3.8
 3.8
 294.7
 0.7
 1.0
 3.1
 2.5
 1.0
 3.0
 1.3
 0.6
0.6
 2.9
1.8
 2.0
1.4
 2.4
1.7
 2.8
2.7
 3.7
1.0
 2.7
46 Mik pfkB-like carbohydrate kinase family protein 835987 At5g58730 4.3 4.5
 2.9
 52.7
 1.3
 1.6
 1.9
 2.9
 1.3
 1.7
 2.5
 1.2
0.0
 1.2
-0.4
 0.5
0.2
 1.0
0.2
 -0.4
 0.3
 0.9
47 AT5G55550 RNA-binding (RRM/RBD/RNP motifs) family protein 835649 At5g55550 4.3 3.7
 3.8
 187.2
 1.7
 3.6
 2.5
 -0.1
 1.5
 4.5
 2.3
2.2






48 AT3G26670 magnesium transporter, putative (DUF803) 822279 At3g26670 4.3 4.2
 3.3
 306.8
 1.9
 1.4
 1.9
 1.8
 0.1
 0.8
 2.2
 3.2
2.7
 2.3
0.7
 -0.4
 1.5
 1.0
 -0.6
 1.6
49 RAB8C RAB GTPase homolog 8C 831817 At5g03520 4.3 4.0
 3.5
 48.7
 0.0
 2.7
 2.4
 2.4
 2.2
 3.6
 2.6
2.6
 1.9
1.8
 1.4
1.2
 1.0
0.8
 1.5
1.2
 2.1
1.9
 1.2
1.1
 1.6
1.3
50 AT5G13500 Hyp O-arabinosyltransferase-like protein 831194 At5g13500 4.3 4.8
 2.6
 55.9
 1.6
 2.5
 0.7
 2.8
 0.4
 4.0
 1.6
 3.3
1.2
 0.3
-0.8
 -0.1
-0.3
 0.7
-0.5
 1.0
0.3
 0.8
 1.8
0.7
The preparation time of this page was 0.9 [sec].