Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4  AT3G27400  Pectin lyase-like superfamily protein 
 ath-r.6  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.9  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.notissue  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.tis  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.str  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.hor  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.bio  AT3G27400  Pectin lyase-like superfamily protein 
 ath-m.4.lig  AT3G27400  Pectin lyase-like superfamily protein 
 ath-e.1  AT3G27400  Pectin lyase-like superfamily protein 
 ath-u.4  AT4G13210  Pectin lyase-like superfamily protein 
 ath-u.4  AT5G04310  Pectin lyase-like superfamily protein 
 gma-u.4  100794814  pectate lyase 
 gma-u.4  100815062  probable pectate lyase 12 
 gma-u.4  100789303  probable pectate lyase 12 
 ppo-u.4  18100132  probable pectate lyase 12 
 ppo-u.4  112323533  probable pectate lyase 18 
 mtr-u.4  25489517  probable pectate lyase 18 
 mtr-u.4  25485548  probable pectate lyase 18 
 mtr-u.4  25483947  probable pectate lyase 12 
 sly-u.4  101257697  probable pectate lyase 12 
 sly-u.4  101254639  probable pectate lyase 8 
 sly-u.4  101264933  probable pectate lyase 5 
 osa-u.4  4348800  probable pectate lyase 5 
 osa-u.4  4335013  probable pectate lyase 8 

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Top 50 coexpressed genes to AT3G27400 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath40   Pentose and glucuronate interconversions  4 79 4.33
 ath940   Phenylpropanoid biosynthesis  2 128 -
 ath4016   MAPK signaling pathway - plant  1 139 -
 ath500   Starch and sucrose metabolism  1 172 -
 ath4075   Plant hormone signal transduction  2 291 -

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ath:AT3G27400 (Pectin lyase-like superfamily protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G27400


ath-r.6
for
AT3G27400


ath-m.9
for
AT3G27400


ath-m.4.notissue
for
AT3G27400


ath-m.4.tis
for
AT3G27400


ath-m.4.str
for
AT3G27400


ath-m.4.hor
for
AT3G27400


ath-m.4.bio
for
AT3G27400


ath-m.4.lig
for
AT3G27400


ath-e.1
for
AT3G27400


ath-u.4
for
AT4G13210


ath-u.4
for
AT5G04310


gma-u.4
for
100794814


gma-u.4
for
100815062


gma-u.4
for
100789303


ppo-u.4
for
18100132


ppo-u.4
for
112323533


mtr-u.4
for
25489517


mtr-u.4
for
25485548


mtr-u.4
for
25483947


sly-u.4
for
101257697


sly-u.4
for
101254639


sly-u.4
for
101264933


osa-u.4
for
4348800


osa-u.4
for
4335013

1 AT1G03820 E6-like protein 839400 At1g03820 13.3 12.0
11.0
1.0
3.8
5.5
2.3
5.8
0.8
7.9
1.3
-0.3
6.6
6.3
1.6
0.3
-0.0
-0.2
1.7
1.2
5.6
3.6
4.2
-0.3
5.0





2 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily protein 814690 At2g01610 9.3 7.7
8.3
1.4
0.6
5.7
1.8
2.7
1.4
4.2
1.9
1.6
1.3
0.6
1.8
1.2
0.9
0.7
2.2
1.6
3.2
1.3
2.2
1.9
1.5
1.1
1.9
0.6
1.1
0.9
2.9
0.7
2.3
1.2
0.9
0.7
0.3
0.7
3 GASA5 GAST1 protein homolog 5 821194 At3g02885 8.4 6.9
7.7
2.5
4.4
5.1
3.0
5.6
0.4
6.2
1.4
1.0
1.0
0.1
4.6
3.7
1.3
1.0
1.9
1.7
3.7
1.5
3.5
1.6
8.1
2.1
0.8
0.2
3.8
3.1
1.4
1.2
5.2
2.8
-0.0
-0.4
1.1
0.9
3.3
2.6
4 EXPA4 expansin A4 818553 At2g39700 8.0 7.7
6.0
6.0
1.2
4.7
1.8
4.2
-2.5
4.9
1.1
1.1
2.2
0.7
4.2
3.2
2.7
2.0
1.7
1.4
5.3
4.1
3.7
3.2
5.2
3.7
1.8
1.7
5.0
4.3
5.1
2.0
4.5
2.7
1.2
0.2
1.6
0.2
3.6
0.8
5 AT5G52390 PAR1 protein 835315 At5g52390 7.4 6.8
6.0
27.5
-0.7
1.7
2.3
3.0
-0.5
4.8
0.9
-0.9
3.0
2.2
1.2
1.0
0.5
0.5
1.0
-0.6
1.6
1.1
3.4
0.3
-0.2
-1.1
1.5
-0.6
-0.1
-1.0
0.1
-0.5
0.1
-0.0


6 EXPB3 expansin B3 828940 At4g28250 7.0 6.6
5.5
7.5
1.2
4.0
2.4
4.5
3.4
4.4
1.1
0.6
0.0
-0.3
2.1
2.0
1.5
0.5
1.2
0.6
1.3
0.8
1.5
1.5
2.7
2.5
1.3
0.7
2.7
1.6
2.0
0.1
2.9
2.6
0.1
0.1
1.4
0.9
1.8
1.1
7 AT4G39320 microtubule-associated protein-like protein 830087 At4g39320 7.0 6.3
5.7
6.7
2.7
1.4
2.0
5.4
0.1
3.4
0.4
1.7













8 AT2G41800 imidazolonepropionase (Protein of unknown function, DUF642) 818779 At2g41800 6.8 5.8
5.9
3.2
0.6
0.6
-0.3
5.2
-0.2
5.9
1.5
1.4
0.6
0.2
2.1
0.6
0.6
-0.7
0.1
0.0
3.0
2.1
3.4
1.6
2.6
0.3
1.7
0.4
2.3
1.6
3.0
0.7
3.6
1.2
-0.8
-0.9
1.2
2.5
9 AT4G24780 Pectin lyase-like superfamily protein 828580 At4g24780 6.5 6.0
5.2
6.9
1.9
3.6
1.3
3.3
2.7
3.6
4.8
3.3
1.9
1.2
10.2
3.0
2.2
2.2
4.7
2.4
2.6
2.6
14.4
7.3
7.2
5.9
1.8
1.4
6.0
4.9
2.8
2.8
7.5
3.7
0.7
0.4
1.7
1.7
10 PR-1-LIKE pathogenesis-related protein-1-like protein 816518 At2g19990 6.2 4.8
5.9
53.8
2.4
2.2
0.4
-0.0
0.7
3.1
1.7
1.6
1.1
0.7
2.3
1.5
0.5
0.4
0.7
0.3
1.1
0.6
1.2
1.2
4.1
0.7
-0.1
-0.2
2.0
1.0
0.6
0.5
0.7
0.3
0.9
0.8
-0.1
-0.4
0.6
-0.1
11 AT1G28400 GATA zinc finger protein 839738 At1g28400 6.2 5.8
4.8
4.5
1.5
2.3
0.8
5.1
1.7
5.2
2.3
-0.2
-0.2
-1.1
5.0
4.3
1.7
1.6
0.2
-0.3
1.0
2.7
2.0
1.7
0.7
0.4
5.0
2.2
1.5
9.7
-0.0


12 PLP6 PATATIN-like protein 6 818507 At2g39220 6.1 5.8
4.8
8.1
0.2
4.7
1.5
2.3
1.6
1.1
0.7
-0.4
0.5
-0.1
0.2
-0.3
0.2
-0.3
0.7
-0.9
2.0
1.1
1.2
0.3
0.6
1.2
0.5
-0.2
-0.2
0.3
0.3
0.7
13 PA2 peroxidase 2 830561 At5g06720 5.7 5.3
4.6
45.8
3.1
2.4
0.3
4.9
-1.7
1.6
1.6
1.5
1.9
1.8
2.2
1.9
2.0
0.7
0.6
0.5
0.7
0.5
2.2
0.6
2.6
1.2
1.7
1.3
1.8
1.4
2.0
1.4
1.8
1.4
-0.0
-0.1
0.9
2.5
14 AT4G18630 hypothetical protein (DUF688) 827597 At4g18630 5.6 4.4
5.3
4.2
2.1
4.4
0.4
3.4
-0.4
1.5
0.3
-1.3













15 AT3G61820 Eukaryotic aspartyl protease family protein 825355 At3g61820 5.5 4.6
4.9
42.7
1.5
3.7
2.3
1.6
2.5
2.8
1.1
1.1
0.8
0.4
1.8
0.4
0.1
-0.1
0.6
-0.0
2.2
1.6
2.4
1.8
0.8
2.9
1.1
1.4
0.8
5.0
1.1
-1.2
-1.6
1.7
0.7
1.9
1.8
16 AT1G66830 Leucine-rich repeat protein kinase family protein 843001 At1g66830 5.5 4.5
4.9
4316.9
2.7
-0.3
0.6
1.3
0.0
1.3
-0.5
-0.0













17 IBS1 Protein kinase superfamily protein 838448 At1g18670 5.4 4.9
4.4
9.8
2.5
2.9
2.4
1.5
-0.2
1.4
1.6
0.6
0.5
0.0
2.4
1.4
0.9
-0.3
1.5
0.9
2.1
2.0
2.5
2.4
2.0
1.7
2.0
1.1
1.1
2.3
1.4
0.2
-0.4
-0.9
-0.4
18 AT5G22930 enabled-like protein (DUF1635) 832357 At5g22930 5.3 5.7







1.3
0.8
0.4
0.8
0.7
2.7
2.4
1.6
1.2
1.8
1.7
3.8
2.2
2.3
2.1
2.4
2.3
1.1
0.9
3.1
1.5
4.0
0.9
2.8
1.2
0.5
-0.5


19 AT1G04680 Pectin lyase-like superfamily protein 839452 At1g04680 5.3 5.5
3.6
28.3
1.5
2.7
0.8
2.2
-0.4
3.6
4.8
3.3
1.9
1.2
10.2
3.0
2.2
2.2
4.7
2.4
2.6
2.6
14.4
7.3
7.2
5.9
1.8
1.4
6.0
4.9
2.8
2.8
7.5
3.7
0.7
0.4
1.7
1.7
20 AT5G44400 FAD-binding Berberine family protein 834466 At5g44400 5.2 4.8
4.3
10.8
3.2
3.4
0.5
1.2
0.2
2.9
1.2
0.5
1.5
1.2
1.9
1.6
1.1
0.4
1.7
1.6
1.5
1.3
2.2
1.2
1.5
1.0
0.7
0.7
2.6
0.7
0.7
0.3
1.3
1.3
0.9
0.8
0.2
0.1
0.2
0.0
21 AT1G14630 XRI1-like protein 838025 At1g14630 4.9 5.2







1.5
1.1
0.0
0.3
-0.1
2.3
1.7
2.0
2.0
1.0
0.4
3.3
2.5
1.5
0.7
3.0
1.9
0.6
0.1
2.1
1.1
1.1
-0.8
0.3
1.0
0.2
1.3
-0.2
22 AT4G22730 Leucine-rich repeat protein kinase family protein 828369 At4g22730 4.8 4.1
4.3
153.8
0.0
3.1
1.6
-0.4
2.4
0.3
1.7
0.6
-0.8
-1.3
1.6
0.9
1.7
1.3
3.4
1.4
2.0
1.5
1.4
1.2
1.1
0.8
0.6
0.6
2.4
1.0
1.3
1.3
2.4
1.6
-0.9
-1.1
0.7
0.6
23 AT3G25130 acidic leucine-rich nuclear phosphoprotein 32 family B protein 822104 At3g25130 4.7 4.0
4.1
68.6
1.2
3.8
0.7
-0.7
1.2
1.9
1.2
0.3
2.4
1.9
-0.0
2.4
3.4
4.8
-0.2
2.7
1.6
0.6
0.7
0.8
2.0
24 ATMPK13 Protein kinase superfamily protein 837303 At1g07880 4.6 3.8
4.3
59.9
2.2
4.2
0.3
-0.1
-0.3
1.8
1.3
0.9
1.4
-0.2
1.2
0.6
1.2
0.3
1.1
0.7
-0.5
-0.6
0.5
0.4
2.6
-0.3
0.3
-0.2
1.9
-0.1
-0.3
-0.5
0.1
0.1
0.7
-0.2
0.7
0.6
-0.1
-0.5
25 PTL Duplicated homeodomain-like superfamily protein 831757 At5g03680 4.6 4.5
3.5
807.5
1.6
3.1
0.1
-0.6
0.2
1.5
1.9
-0.2
2.2
1.4
3.1
0.7
1.2
1.1
3.0
1.6
1.9
0.4
1.9
0.1
0.4
-1.2
0.4
-0.1
0.8
-0.1
-0.1


26 CYCD3;1 CYCLIN D3;1 829564 At4g34160 4.5 3.9
4.0
86.4
0.9
3.0
0.5
0.2
1.5
3.2
2.5
0.6
0.3
-1.7
1.6
1.3
2.2
1.6
1.3
1.2
2.6
2.3
0.9
0.7
2.1
1.8
0.5
0.5
4.7
3.0
3.8
3.2
1.4
1.1
-0.1
-1.3


27 AT3G42725 Putative membrane lipoprotein 823305 At3g42725 4.4 3.9
3.8
296.5
1.4
2.9
0.8
1.0
-0.8
1.5
1.5
0.0
1.5
1.4
1.9
1.4
0.8
0.6
2.8
1.2
3.2
0.7
4.5
2.2
0.0
-0.2


28 AT2G28140 enabled-like protein (DUF1635) 817360 At2g28140 4.4 4.6







1.5
0.8
0.4
0.8
0.7
2.7
2.4
1.6
1.2
1.8
1.7
3.8
2.2
2.3
2.1
2.4
2.3
1.1
0.9
3.1
1.5
4.0
0.9
2.8
1.2
0.5
-0.5


29 WOX4 WUSCHEL related homeobox 4 841113 At1g46480 4.3 4.5







1.8
0.8
-0.6
3.6
3.1
0.9
0.8
1.0
0.3
4.2
2.3
2.2
1.5
3.0
0.1
1.2
2.9
1.0
-0.1


30 PIP2;5 plasma membrane intrinsic protein 2;5 824647 At3g54820 4.3 4.4
3.1
3178.5
-0.3
1.8
1.4
-1.4
1.0
3.9
1.5
1.5
0.8
0.7
1.0
0.7
0.9
0.8
1.1
0.9
0.9
0.8
1.9
0.9
0.9
0.5
2.0
0.4
2.0
1.2
0.9
0.6
1.4
1.0
0.4
0.4
-0.1
-0.2
0.6
0.6
31 RABA5b RAB GTPase homolog A5B 819929 At3g07410 4.2 3.9
3.4
4.9
1.0
2.6
3.1
4.8
-1.6
1.8
2.0
-0.2
0.5
0.2
1.1
-0.0
-0.2
-0.4
1.3
1.0
0.1
0.1
1.4
0.1
2.2
0.4
1.9
1.4
2.4
-0.1
1.1
0.7
4.3
1.2
0.2
-0.7
1.9
-0.6
32 AT5G26670 Pectinacetylesterase family protein 832722 At5g26670 4.2 4.3







2.9
3.2
2.6
0.5
0.2
1.7
0.8
0.7
0.3
2.1
1.9
2.1
1.6
2.0
1.8
5.0
1.2
2.2
1.8
4.1
0.7
0.3
-0.1
1.2
0.3
0.3
-0.8
0.6
0.4
2.6
1.6
33 AT1G77400 extensin-like protein 844076 At1g77400 4.2 3.9
3.3
22.4
3.0
2.2
0.8
2.2
0.3
1.1
0.0
-0.4
2.2
0.4
0.5
2.0
0.6
1.6
1.6
1.7
-0.9
0.4
0.1
3.1
0.3
-0.2
0.3
34 XYP1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 836529 At5g64080 4.2 4.2
3.0
4.0
-0.8
2.4
1.6
5.1
1.2
2.3
1.7
0.9
0.3
-0.5
2.9
1.4
0.4
0.0
0.7
-0.5
2.8
-0.7
0.4
-0.1
3.3
1.3
2.1
0.2
1.2
-1.3
-0.3
-0.5
35 AT1G64405 uncharacterized protein 842749 At1g64405 4.2 3.3
3.9
92.6
0.6
4.0
1.6
1.2
0.9
1.7
0.8
0.5
0.7
-0.6
0.7


1.6
0.5
0.2



0.7
-0.1
2.8
0.4
36 AT3G15720 Pectin lyase-like superfamily protein 820815 At3g15720 4.1 3.5
3.6
1789.9
1.1
2.8
0.6
0.2
2.8
0.6
-0.9
1.0
0.6
0.2
0.7
-0.7
-0.5
-0.5


0.8
0.7
0.2
0.1
1.0
0.0
0.2
-0.4
-0.9
-1.0
0.5
-0.5


37 GH9C2 glycosyl hydrolase 9C2 842747 At1g64390 4.0 4.1
2.9
29.2
0.6
3.8
1.7
1.6
2.1
2.8
2.2
2.0
0.1
-1.0
1.3
1.0
-0.3
-0.3
0.3
-0.4
2.5
0.7
3.0
1.8
1.2
2.0
2.0
2.5
2.1
7.8
2.0
0.3
0.1
0.6
0.4
0.6
0.4
38 AT1G28570 SGNH hydrolase-type esterase superfamily protein 839757 At1g28570 3.9 3.4
3.4
3779.5
0.6
1.0
0.6
1.5
2.8
0.2
0.8
-0.3
1.7
0.3
1.2
0.7
0.4
0.0
0.5
-0.8
0.3
0.1
1.3
0.5
0.1
-0.3
0.8
-1.2
0.5
-1.4
1.9
1.2
2.2
1.8
0.1
-0.3
0.8
0.4
1.4
0.6
39 AT5G23400 Leucine-rich repeat (LRR) family protein 832405 At5g23400 3.9 3.9
2.8
146.2
1.0
2.1
0.5
0.6
-0.7
3.1
2.0
0.1
2.6
1.4
0.7
0.4
1.9
1.2
1.9
2.2
1.1
2.3
2.5
1.4
2.2
-0.5


40 AAP6 amino acid permease 6 835025 At5g49630 3.9 3.7
3.0
925.0
1.6
2.7
0.8
1.4
-0.7
0.6
1.5
-0.3
0.3
-0.3
1.5
1.1
1.3
1.0
0.2
-0.0
0.3
0.7
2.0
-0.3
0.3
-1.7
1.0
-0.9
0.6
-0.1
1.0
-0.1
3.8
1.1
1.1
0.6
41 AT4G36430 Peroxidase superfamily protein 829795 At4g36430 3.8 3.5
3.2
358.5
1.8
2.4
0.6
1.6
0.5
3.2
0.5
0.4
0.3
0.2
1.5
0.8
1.4
1.1
0.2
0.1
0.5
0.0
-0.3
-0.6
-0.1
-0.7
0.5
-0.7
0.5
-0.2
1.8
0.6
0.9
0.3
0.3
-0.2
0.6
-1.3
-0.1
-1.2
42 AT2G25270 uncharacterized protein 817065 At2g25270 3.8 3.2
3.5
672.1
0.5
2.5
1.6
0.4
0.4
2.2
1.4
-1.5
0.5
-0.5
1.8
1.6
3.1
2.1
0.2
-0.1
4.0
3.1
1.6
0.3
3.6
0.3
0.1
-0.4
4.2
-0.3
4.1
-0.0
1.2
0.9
-0.7
-0.8
1.1
-0.2
43 AT2G40480 WEB family protein (DUF827) 818643 At2g40480 3.8 3.8
2.8
80.5
1.7
3.5
1.1
-0.1
1.2
1.2
1.4
1.3
0.7
0.6
1.9
1.6
1.3
1.1
0.9
0.8
2.9
2.8
1.5
1.2
3.6
3.2
0.8
0.4
3.8
2.1
1.8
1.4
0.7
0.3
-0.6
-1.0
0.8
0.5
1.6
1.4
44 ROPGEF5 ROP guanine nucleotide exchange factor 5 830479 At5g05940 3.8 3.8
2.8
403.7
0.2
3.1
0.9
-0.4
-0.4
2.6
2.0
1.5
0.4
-1.0
1.2
1.1
2.7
2.2
2.0
1.5
1.6
1.0
1.3
1.0
1.5
1.5
1.4
1.0
3.9
3.6
2.4
0.6
3.3
1.0
0.2
-0.0
1.4
1.0
1.7
1.0
45 AT2G47010 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase 819315 At2g47010 3.8 3.2
3.4
2511.9
-0.0
2.2
0.6
1.2
1.6
2.1
1.8
1.5
0.5
0.2
1.4
1.2
0.7
0.3
0.4
0.0
0.0
-0.8
2.3
0.9
1.0
0.4
2.5
2.8
0.5
2.0
0.5
0.6
0.4
1.0
0.8
1.4
-0.6
46 AT1G67750 Pectate lyase family protein 843100 At1g67750 3.8 3.6
3.0
1690.6
1.0
1.9
1.6
0.2
-0.4
2.4
4.8
3.3
1.9
1.2
10.2
3.0
2.2
2.2
4.7
2.4
2.6
2.6
14.4
7.3
7.2
5.9
1.8
1.4
6.0
4.9
2.8
2.8
7.5
3.7
0.7
0.4
1.7
1.7
47 ANT Integrase-type DNA-binding superfamily protein 829931 At4g37750 3.8 4.0
2.5
65.0
0.2
3.7
1.6
0.0
1.8
1.6
1.3
-1.2
2.8
2.5
2.9
2.6
1.6
0.9
2.1
1.5
0.1
-0.0
1.9
1.7
0.9
0.7
3.9
2.6
4.3
2.0
0.6
0.1
1.2
-1.1
1.2
0.9
1.2
0.9
48 AT5G11410 Protein kinase superfamily protein 831012 At5g11410 3.7 3.3
3.2
5732.1
1.9
1.5
0.2
0.1
0.5
0.8
-0.3
0.5













49 AT3G61920 UvrABC system protein C 825365 At3g61920 3.7 3.3
3.1
2767.4
3.0
0.9
-0.7
-0.8
0.6
0.8
0.1
-0.0
3.6
1.6
0.8
1.2
-0.7
4.2
1.3
1.9
1.0
0.5
0.2
3.1
1.7
2.1
0.2
0.5


50 AT1G25570 Di-glucose binding protein with Leucine-rich repeat domain-containing protein 839144 At1g25570 3.7 3.6
2.8
137.8
1.5
2.3
-0.6
2.4
1.0
2.1
1.2
0.4
2.7
-0.3
0.5
0.5
3.3
1.1
0.8
-1.2
2.3
0.4
-0.4
-0.5
2.0
1.4
1.0
0.9
-0.3
4.3
-0.7
2.0
1.6
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