Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   PDR2   phosphate deficiency response 2 
 ath-r.6   PDR2   phosphate deficiency response 2 
 ath-m.9   PDR2   phosphate deficiency response 2 
 ath-m.4.notissue   PDR2   phosphate deficiency response 2 
 ath-m.4.tis   PDR2   phosphate deficiency response 2 
 ath-m.4.str   PDR2   phosphate deficiency response 2 
 ath-m.4.hor   PDR2   phosphate deficiency response 2 
 ath-m.4.bio   PDR2   phosphate deficiency response 2 
 ath-m.4.lig   PDR2   phosphate deficiency response 2 
 ath-e.1   PDR2   phosphate deficiency response 2 
 gma-u.4   100807022   probable manganese-transporting ATPase PDR2 
 gma-u.4   100789385   probable manganese-transporting ATPase PDR2 
 ppo-u.4   18097753   probable manganese-transporting ATPase PDR2 
 ppo-u.4   7465895   probable manganese-transporting ATPase PDR2 
 mtr-u.4   25489896   probable manganese-transporting ATPase PDR2 
 sly-u.4   101249766   probable manganese-transporting ATPase PDR2 
 osa-u.4   4338738   probable manganese-transporting ATPase PDR2 

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Top 50 coexpressed genes to PDR2 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4144   Endocytosis  5 146 4.48
 ath4141   Protein processing in endoplasmic reticulum  5 187 3.97
 ath510   N-Glycan biosynthesis  1 46 -
 ath3018   RNA degradation  2 113 -
 ath3015   mRNA surveillance pathway  2 119 -

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ath:PDR2 (phosphate deficiency response 2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
PDR2
ath-r.6
for
PDR2
ath-m.9
for
PDR2
ath-m.4.notissue
for
PDR2
ath-m.4.tis
for
PDR2
ath-m.4.str
for
PDR2
ath-m.4.hor
for
PDR2
ath-m.4.bio
for
PDR2
ath-m.4.lig
for
PDR2
ath-e.1
for
PDR2
gma-u.4
for
100807022
gma-u.4
for
100789385
ppo-u.4
for
18097753
ppo-u.4
for
7465895
mtr-u.4
for
25489896
sly-u.4
for
101249766
osa-u.4
for
4338738
1 AT3G51050 FG-GAP repeat-containing protein 824269 At3g51050 8.8 9.2
 6.1
 7.5
 0.7
 5.4
 3.2
 3.7
 0.4
 6.0
 4.3
3.0
 2.8
1.8
 2.1
1.0
 3.9
0.0
 3.2
 3.9
 2.2
2 NUP1 nuclear pore complex protein 820234 At3g10650 8.8 7.7
 7.5
 14.4
 2.0
 2.5
 4.5
 2.8
 2.1
 7.1
 7.2
5.4
 7.3
6.4
 4.0
3.8
 3.5
2.2
 5.2
2.0
 4.0
2.6
 3.6
3 AT5G47480 RGPR-like protein 834798 At5g47480 8.5 8.6
 6.0
 1898.6
 0.8
 2.1
 1.2
 0.7
 1.9
 5.8
 3.4
3.1
 3.2
3.1
 5.2
4.3
 3.8
3.2
 3.1
2.8
 4.7
4.3
 3.5
2.2
4 AT3G63460 transducin family protein / WD-40 repeat family protein 825521 At3g63460 8.3 10.2
 4.2
 1955.2
 0.3
 0.1
 2.9
 1.9
 0.3
 9.3
 7.0
6.9
 6.8
6.6
 5.7
3.5
 4.0
2.6
 3.5
 5.6
 5.4
5 AT1G05520 Sec23/Sec24 protein transport family protein 837054 At1g05520 8.1 7.5
 6.5
 1.4
 0.2
 4.6
 3.7
 2.9
 0.6
 6.2
 5.5
4.2
 4.7
4.5
 5.7
4.3
 4.8
4.3
 4.4
 6.8
4.2
 3.6
6 DEX1 defective in exine formation protein (DEX1) 820063 At3g09090 8.0 7.7
 6.1
 152.0
 -0.0
 1.6
 3.3
 2.6
 0.5
 6.9
 8.3
6.7
 5.5
5.2
 1.9
1.6
 2.2
2.0
 3.5
 3.4
2.0
 4.1
7 UBP25 ubiquitin-specific protease 25 820662 At3g14400 7.6 7.3
 5.9
 36.7
 3.6
 3.2
 1.0
 1.7
 1.0
 4.3
 7.1
4.7
 5.6
4.4
 3.3
2.0
 2.7
1.4
 1.8
 1.9
 1.4
8 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 831488 At5g16280 7.6 7.7
 5.5
 1353.6
 1.5
 0.8
 2.1
 0.2
 1.2
 4.3
 3.0
1.8
 2.9
1.7
 3.3
 2.9
 1.8
 3.6
 3.1
9 AT5G15680 ARM repeat superfamily protein 831422 At5g15680 7.5 6.3
 6.6
 1209.1
 2.3
 1.6
 1.4
 1.6
 -0.0
 5.1
 3.3
3.0
 3.1
2.4
 2.4
 0.5
 1.5
 4.8
2.6
 2.5
10 AT1G02080 transcription regulator 839244 At1g02080 7.4 6.1
 6.7
 109.2
 0.6
 3.6
 2.2
 2.0
 1.2
 3.5
 4.8
4.2
 4.6
4.3
 4.0
3.3
 3.4
1.4
 2.7
 4.9
 2.6
1.1
11 NRB4 mediator of RNA polymerase II transcription subunit 15a-like protein 838147 At1g15780 7.3 6.0
 6.7
 70.0
 1.6
 2.6
 2.7
 1.5
 4.0
 3.7
 1.7
1.6
 2.2
2.1
 1.9
1.8
 0.7
0.7
 2.8
1.4
 3.1
 2.2
12 CCC1 cation-chloride co-transporter 1 839924 At1g30450 7.3 7.9






5.5
 4.4
3.9
 3.3
3.0
 4.1
3.6
 4.0
3.0
 4.9
 4.8
3.3
 4.0
0.5
13 AT4G38200 SEC7-like guanine nucleotide exchange family protein 829976 At4g38200 7.3 6.8
 5.9
 352.8
 0.8
 2.5
 2.3
 0.4
 0.1
 7.4
 4.7
4.6
 3.7
3.5
 5.6
4.9
 3.3
3.2
 3.6
 6.5
 4.6
2.6
14 AT2G01970 Endomembrane protein 70 protein family 814728 At2g01970 7.3 8.0
 4.6
 83.4
 0.1
 2.8
 3.8
 2.3
 2.8
 8.2
 4.9
3.5
 3.9
3.1
 2.6
2.1
 3.4
2.3
 3.2
2.5
 2.7
1.3
 2.9
2.8
15 GMII golgi alpha-mannosidase II 831347 At5g14950 7.3 6.9
 5.7
 30.9
 0.3
 3.3
 3.0
 1.7
 -0.4
 4.7
 5.4
2.0
 4.1
2.1
 2.9
1.5
 1.5
1.0
 2.3
 2.8
 1.2
16 UBP16 ubiquitin-specific protease 16 828558 At4g24560 7.3 6.2
 6.3
 341.3
 2.2
 2.0
 3.6
 1.0
 1.0
 6.1
 4.4
3.9
 4.0
3.5
 4.0
3.9
 4.1
2.9
 2.0
2.0
 4.0
 2.4
1.3
17 AT2G41960 uncharacterized protein 818796 At2g41960 7.2 5.2
 7.4
 219.1
 1.5
 2.6
 1.4
 0.8
 2.3
 5.5
 3.6
2.9
 3.2
3.0
 3.4
2.0
 3.4
2.5
 3.6
2.7
 4.4
 4.0
2.3
18 AT3G50370 uncharacterized protein 824199 At3g50370 7.1 5.5
 6.8
 226.1
 3.6
 2.6
 2.8
 0.9
 0.1
 5.3
 4.1
3.3
 4.7
3.7
 5.7
3.5
 3.9
3.6
 1.9
 7.1
 2.6
19 AT1G21630 Calcium-binding EF hand family protein 838765 At1g21630 7.1 7.2
 5.1
 1383.1
 1.4
 1.0
 1.8
 0.0
 0.9
 6.1
 5.7
4.7
 5.6
4.5
 4.2
4.1
 5.5
4.5
 3.3
2.8
 5.7
4.9
 6.9
3.7
20 ALA2 aminophospholipid ATPase 2 834447 At5g44240 7.1 6.5
 5.7
 302.7
 1.7
 2.2
 1.5
 1.7
 2.3
 6.3
 4.1
2.4
 3.9
2.9
 2.1
 1.4
 2.4
 3.7
 2.6
1.1
21 ERMO2 Sec23/Sec24 protein transport family protein 819896 At3g07100 7.0 7.5
 4.6
 337.9
 -0.6
 1.8
 2.5
 2.4
 -0.1
 5.1
 8.8
7.1
 8.3
7.4
 4.9
4.2
 4.6
3.1
 4.1
 8.3
 3.0
22 AT3G50590 Transducin/WD40 repeat-like superfamily protein 824223 At3g50590 7.0 6.9
 5.3
 182.2
 0.3
 2.2
 1.6
 2.4
 -0.3
 6.3
 6.0
4.5
 5.3
3.5
 5.0
 4.3
 2.8
-0.7
 6.9
 4.2
23 ESP4 HEAT repeat-containing protein 831597 At5g01400 7.0 8.1
 4.0
 226.4
 0.1
 1.4
 1.4
 3.6
 0.6
 5.6
 5.7
4.2
 5.2
3.7
 3.4
 2.2
 2.4
 3.3
 2.1
24 NEF1 no exine formation 1 831180 At5g13390 7.0 5.5
 6.5
 65.6
 0.7
 2.4
 2.5
 1.4
 -0.2
 7.3
 7.0
4.6
 6.3
5.2
 4.4
3.0
 4.2
2.3
 3.8
 4.3
 1.9
25 DL3 dynamin-like 3 842251 At1g59610 6.9 6.5
 5.5
 157.9
 0.2
 3.0
 0.8
 1.4
 1.8
 4.8
 5.7
5.3
 5.1
4.6
 2.8
2.4
 2.6
2.6
 3.6
1.8
 5.8
0.5
 2.7
2.3
26 CEF uncharacterized protein 823559 At3g44340 6.9 6.7
 5.2
 22.3
 0.5
 4.4
 1.8
 3.6
 1.7
 5.5
 6.1
3.5
 5.2
3.3
 4.9
4.7
 4.4
4.3
 4.2
 5.3
0.4
 4.0
2.9
27 GSL10 glucan synthase-like 10 819903 At3g07160 6.9 5.8
 6.0
 114.1
 0.4
 1.9
 3.5
 1.1
 -0.1
 5.9
 4.4
3.8
 3.8
3.0
 4.6
 3.5
 3.3
 5.2
 3.7
28 ECA1 ER-type Ca2+-ATPase 1 837296 At1g07810 6.8 7.4






7.5
 4.0
3.8
 4.4
4.3
 1.9
1.0
 4.0
4.0
 4.6
 5.4
 3.8
1.5
29 AT3G58050 uncharacterized protein 824974 At3g58050 6.8 5.6
 6.2
 93.3
 2.2
 0.8
 2.9
 1.7
 2.6
 5.0
 3.6
2.9
 3.2
3.0
 3.4
2.0
 3.4
2.5
 3.6
2.7
 4.4
 4.0
2.3
30 AT3G08530 Clathrin, heavy chain 820001 At3g08530 6.8 7.1






6.8
 7.0
6.3
 5.6
5.1
 5.4
4.8
 6.5
5.8
 4.4
3.1
 7.1
6.9
 4.2
3.4
31 GSL8 glucan synthase-like 8 818258 At2g36850 6.8 6.3
 5.5
 1844.9
 0.0
 1.0
 3.0
 0.2
 -0.2
 5.2
 3.2
2.0
 2.8
2.2
 3.4
 3.0
 2.8
 4.2
 3.7
32 VCS Transducin/WD40 repeat-like superfamily protein 820530 At3g13300 6.8 7.0






9.1
 5.0
4.6
 5.2
5.2
 3.7
3.2
 2.8
2.5
 2.6
2.2
 5.2
2.6
 4.2
2.0
33 AT3G11130 Clathrin, heavy chain 820284 At3g11130 6.8 7.1






4.8
 7.0
6.3
 5.6
5.1
 5.4
4.8
 6.5
5.8
 4.4
3.1
 7.1
6.9
 4.2
3.4
34 DRP3A dynamin-related protein 3A 829506 At4g33650 6.7 7.6
 4.0
 62.8
 0.2
 1.1
 2.2
 3.0
 1.7
 5.2
 7.6
5.7
 8.7
5.3
 2.6
2.5
 3.6
3.2
 3.2
2.5
 4.5
2.8
 2.2
35 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 6.7 5.1
 6.5
 104.2
 2.1
 1.8
 3.2
 1.3
 2.7
 4.6
 5.3
4.2
 5.8
4.7
 4.4
4.1
 3.7
3.6
 2.8
 5.0
4.0
 0.6
36 TRS120 TRS120 830971 At5g11040 6.7 5.8
 5.8
 71.2
 0.2
 3.0
 1.9
 2.5
 -0.2
 6.7
 5.0
4.2
 4.4
3.3
 3.0
2.5
 3.5
2.8
 2.0
 7.8
 4.0
37 BSL3 BRI1 suppressor 1 (BSU1)-like 3 817263 At2g27210 6.7 7.2






6.6
 6.0
4.9
 5.8
5.8
 4.4
1.9
 4.1
2.8
 2.7
2.2
 6.8
5.4
 2.2
1.2
38 AT5G16300 Vps51/Vps67 family (components of vesicular transport) protein 831491 At5g16300 6.6 6.6
 4.9
 163.5
 0.6
 4.1
 2.4
 0.9
 0.9
 4.1
 4.3
3.0
 5.1
3.3
 3.9
3.6
 3.6
2.6
 2.7
 2.9
 3.5
39 AT2G21390 Coatomer, alpha subunit 816678 At2g21390 6.6 6.2
 5.3
 106.0
 -0.4
 2.6
 3.6
 2.4
 -0.5
 4.0
 5.8
5.2
 4.3
4.1
 3.9
3.4
 5.4
4.6
 3.6
2.7
 7.3
6.4
 4.7
3.7
40 AT1G72390 nuclear receptor coactivator 843571 At1g72390 6.6 6.8
 4.7
 189.1
 2.7
 1.8
 1.7
 1.6
 1.3
 5.5
 2.6
1.0
 2.4
1.1
 5.0
3.1
 3.4
1.2
 2.1
 3.5
 3.4
41 CCT RNA polymerase II transcription mediator 827954 At4g00450 6.6 5.4
 6.0
 525.8
 1.2
 2.0
 2.0
 1.1
 0.7
 5.6
 4.9
4.1
 4.8
4.6
 4.0
2.3
 2.4
1.5
 2.3
2.2
 4.6
 2.9
1.3
42 AT1G04140 Transducin family protein / WD-40 repeat family protein 839272 At1g04140 6.6 6.7
 4.6
 669.1
 0.1
 1.8
 1.7
 0.8
 2.4
 3.3
 3.6
1.8
 3.2
3.0
 4.6
3.5
 3.7
2.1
 1.9
1.1
 3.5
1.7
 3.5
-0.2
43 SMG7 Telomerase activating protein Est1 832060 At5g19400 6.5 6.2
 5.1
 396.2
 0.9
 2.2
 2.1
 0.7
 2.5
 6.2
 4.0
3.2
 4.6
4.3
 2.4
0.2
 1.7
1.4
 2.1
1.5
 3.1
2.3
 2.2
44 TRH1 Potassium transporter family protein 828464 At4g23640 6.5 6.8
 4.5
 402.1
 1.5
 1.3
 2.0
 2.4
 -0.3
 7.2
 3.0
2.6
 2.6
2.1
 1.6
0.8
 0.3
-0.1
 0.9
0.1
 1.3
1.2
 1.3
1.1
45 AT2G07360 SH3 domain-containing protein 815305 At2g07360 6.5 6.5
 4.7
 1078.2
 0.1
 2.0
 1.8
 1.5
 -0.4
 7.1
 3.9
3.3
 4.0
3.2
 5.3
 4.4
 3.7
 4.1
 3.9
46 AT5G11560 catalytics 831028 At5g11560 6.5 6.5
 4.7
 138.1
 -0.7
 3.0
 2.1
 3.0
 1.5
 5.8
 5.7
5.2
 4.0
3.7
 4.9
4.3
 4.2
3.7
 3.8
 4.9
 3.9
47 GAMMA-ADAPTIN 1 gamma-adaptin 1 839001 At1g23900 6.5 7.1






3.5
 5.5
4.5
 3.9
3.8
 4.5
3.3
 3.9
3.3
 4.1
2.2
 4.6
3.2
 3.6
1.6
48 AT4G32640 Sec23/Sec24 protein transport family protein 829399 At4g32640 6.4 7.3
 3.8
 628.9
 -0.4
 1.0
 3.0
 2.7
 0.1
 5.3
 6.1
3.5
 5.2
3.3
 4.9
4.7
 4.4
4.3
 4.2
 5.3
0.4
 4.0
2.9
49 MOS14 ARM repeat superfamily protein 836381 At5g62600 6.4 6.5
 4.6
 1151.9
 1.0
 1.1
 1.6
 0.6
 1.2
 4.2
 6.2
4.8
 4.9
4.2
 2.4
2.0
 2.8
2.7
 1.8
 4.0
 1.6
50 ELF7 hydroxyproline-rich glycoprotein family protein 844312 At1g79730 6.4 6.3
 4.7
 5.9
 0.4
 3.7
 2.1
 2.0
 2.6
 3.3
 2.7
1.2
 3.0
2.6
 3.0
2.6
 1.9
0.6
 1.1
 3.3
 1.8
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