Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-r.6  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.9  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.notissue  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.tis  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.str  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.hor  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.bio  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-m.4.lig  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 ath-e.1  NRS/ER  nucleotide-rhamnose synthase/epimerase-reductase 
 gma-u.4  100787499  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like 
 gma-u.4  100781643  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 
 ppo-u.4  7478085  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 
 ppo-u.4  7465830  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 
 mtr-u.4  25493641  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 
 sly-u.4  101249670  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 
 osa-u.4  9267465  bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 

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Top 50 coexpressed genes to NRS/ER (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath520   Amino sugar and nucleotide sugar metabolism  8 111 9.47
 ath1240   Biosynthesis of cofactors  8 220 7.13
 ath1250   Biosynthesis of nucleotide sugars  7 86 8.71
 ath190   Oxidative phosphorylation  4 165 3.10
 ath1200   Carbon metabolism  4 258 2.39

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ath:NRS/ER (nucleotide-rhamnose synthase/epimerase-reductase) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-u.4
for
NRS/ER


ath-r.6
for
NRS/ER


ath-m.9
for
NRS/ER


ath-m.4.notissue
for
NRS/ER


ath-m.4.tis
for
NRS/ER


ath-m.4.str
for
NRS/ER


ath-m.4.hor
for
NRS/ER


ath-m.4.bio
for
NRS/ER


ath-m.4.lig
for
NRS/ER


ath-e.1
for
NRS/ER


gma-u.4
for
100787499


gma-u.4
for
100781643


ppo-u.4
for
7478085


ppo-u.4
for
7465830


mtr-u.4
for
25493641


sly-u.4
for
101249670


osa-u.4
for
9267465

1 UDG4 UDP-glucose 6-dehydrogenase family protein 833928 At5g39320 6.3 5.9
5.0
20.8
2.5
4.5
4.2
1.7
-1.1
3.1
4.5
4.3
3.7
3.1
9.0
6.3
7.9
6.9
6.6
3.3
4.4
3.3
3.2
2.2
2 MSR1 O-fucosyltransferase family protein 821672 At3g21190 6.2 5.3
5.4
35.7
0.8
3.0
4.2
3.6
1.1
2.9
1.5
1.5
3.4
2.3
2.9
2.1
3.2
3.0
0.8
0.0
5.7
1.4
3 CAP1 cyclase associated protein 1 829600 At4g34490 6.1 5.0
5.5
4.0
2.9
5.5
2.3
1.8
0.4
4.1
1.2
1.0
1.1
0.3
2.1
0.4
1.9
0.6
2.2
3.3
0.8
1.6
4 UGP1 UDP-GLUCOSE PYROPHOSPHORYLASE 1 821313 At3g03250 5.9 4.8
5.5
116.5
2.2
3.1
1.3
5.2
0.7
3.1
2.1
1.8
5.1
3.5
2.4
1.1
3.1
1.2
2.9
-0.3
2.4
2.2
1.8
5 MAT3 methionine adenosyltransferase 3 818260 At2g36880 5.7 4.8
5.0
90.6
3.2
3.7
2.0
-0.2
1.8
6.2
3.2
2.4
3.9
3.6
7.5
7.2
7.0
6.1
5.5
3.2
5.8
3.0
1.5
0.4
6 UGD2 UDP-glucose 6-dehydrogenase family protein 822594 At3g29360 5.6 5.0
4.7
42.7
1.7
3.7
1.8
0.6
-0.3
3.0
4.5
4.3
3.7
3.1
9.0
6.3
7.9
6.9
6.6
3.3
4.4
3.3
3.2
2.2
7 AT1G20950 Phosphofructokinase family protein 838689 At1g20950 5.6 5.6
4.1
165.7
0.7
2.7
1.1
1.3
-1.1
3.7
1.3
0.4
1.0
0.8
4.0
-1.2
5.4
-1.8
2.0
3.2
0.1
0.5
-0.3
8 SHM2 serine hydroxymethyltransferase 2 832736 At5g26780 5.4 5.4
4.0
632.6
0.9
1.9
1.7
2.0
0.4
2.5
1.3
0.9
3.6
1.1
2.5
-0.6
3.3
-0.3
4.1
-0.1
1.3
1.0
1.4
9 HXK1 hexokinase 1 829034 At4g29130 5.3 6.2
3.0
597.7
1.3
1.6
1.3
1.4
0.1
4.4
0.7
-0.1
0.6
0.0
5.5
1.4
6.4
0.0
2.0
1.2
1.9
1.8
2.8
1.2
10 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 827528 At4g18030 5.3 4.5
4.6
53.2
-0.1
4.5
2.2
2.4
-0.2
2.7
2.0
1.7
4.5
4.0
3.2
3.0
2.4
2.1
5.1
2.1
3.8
2.9
2.0
0.6
11 TUB1 tubulin beta-1 chain 843911 At1g75780 5.3 5.0
4.1
120.8
3.6
2.3
2.9
0.8
-1.1
2.4
4.4
3.5
4.7
4.7
4.3
4.2
4.6
4.2
4.3
4.0
5.3
4.7
1.7
1.2
12 MUM4 NAD-dependent epimerase/dehydratase family protein 841785 At1g53500 5.3 3.4
5.7
71.8
3.2
2.9
2.7
2.1
1.6
2.1
2.4
1.7
3.3
2.1
6.5
6.4
5.4
4.9
2.6
0.4
3.8
2.7
3.2
13 GAMMA CA2 gamma carbonic anhydrase 2 841129 At1g47260 5.2 5.3
3.6
1263.1
0.4
1.4
2.0
0.8
0.5
3.6
0.3
0.3
2.0
1.3
5.6
3.0
4.3
2.2
3.1
2.2
2.0
0.3
2.1
1.8
14 XT2 UDP-xylosyltransferase 2 827940 At4g02500 5.0 5.1
3.6
261.2
0.6
1.7
1.6
3.9
0.1
2.7
1.4
0.8
2.3
1.9
4.7
4.2
5.2
4.2
3.3
0.3
1.3
1.0
15 SHM4 serine hydroxymethyltransferase 4 827027 At4g13930 5.0 5.2







5.3
3.3
2.8
7.6
5.4
6.6
3.5
6.6
3.3
5.2
3.4
5.4
3.0
2.6
0.1
16 PPa5 pyrophosphorylase 5 827962 At4g01480 4.9 4.5
4.0
28.3
1.8
3.0
3.3
1.8
1.7
1.6
2.7
2.2
2.6
1.5
2.7
2.4
3.0
2.4
1.8
1.3
3.0
2.6
1.3
1.2
17 CGR3 uncharacterized protein 836710 At5g65810 4.9 4.0
4.5
243.4
2.1
2.3
2.8
2.0
-0.9
1.4
2.8
2.8
3.9
3.1
6.4
4.1
6.1
4.8
3.3
2.8
5.2
3.8
1.6
18 RGP1 reversibly glycosylated polypeptide 1 821233 At3g02230 4.9 5.1







4.0
3.3
1.9
4.3
2.5
6.4
3.3
4.3
3.1
5.6
4.0
4.1
3.4
4.1
3.3
19 SIP2;1 small and basic intrinsic protein 2;1 824862 At3g56950 4.9 4.8
3.6
1304.2
3.0
1.8
0.6
0.4
1.7
3.3
-0.9
-0.9
1.0
0.8
1.7
0.4
1.4
-0.5
-1.0
-0.4
0.2
20 AT1G64650 Major facilitator superfamily protein 842773 At1g64650 4.9 5.0
3.4
44.4
0.9
3.2
2.5
2.7
-1.9
2.8
2.8
2.7
3.8
3.1
6.3
5.2
5.7
4.9
3.5
4.5
3.6
2.3
2.1
21 AT5G66420 TIM-barrel signal transduction protein 836774 At5g66420 4.9 4.4
4.0
54.7
0.7
2.1
2.3
4.7
1.2
2.7
0.4
1.5
1.1
2.7
-0.1
1.9
2.7
22 ATMS1 Cobalamin-independent synthase family protein 831660 At5g17920 4.8 4.9







3.7
3.4
2.4
7.5
5.0
4.9
4.3
6.0
3.6
3.4
0.8
3.6
-0.0
2.5
2.1
23 AT3G04830 Protein prenylyltransferase superfamily protein 819643 At3g04830 4.8 5.0
3.3
1306.9
-0.4
1.8
1.9
0.5
0.3
2.9
0.3
-0.4
0.6
0.5
3.7
-0.2
2.9
-0.2
2.0
0.6
2.4
24 ATMPK8 Protein kinase superfamily protein 838394 At1g18150 4.8 4.8
3.5
110.2
1.6
2.3
3.4
1.5
2.4
1.3
1.6
-0.0
1.3
-1.2
2.1
0.7
2.3
0.6
1.1
0.8
1.1
0.6
1.7
1.2
25 GlcNAc1pUT1 N-acetylglucosamine-1-phosphate uridylyltransferase 1 839993 At1g31070 4.7 3.9
4.2
43.6
2.9
2.8
1.7
4.2
2.2
1.4
0.9
0.5
0.8
-0.6
4.3
1.8
3.3
3.0
3.2
3.4
2.1
-0.9
26 AT3G06035 Glycoprotein membrane precursor GPI-anchored 819776 At3g06035 4.7 4.3
3.8
44.0
1.4
2.6
3.7
3.7
0.2
2.2
2.5
1.9
2.8
2.6
3.3
2.7
5.0
2.5
3.5
1.3
0.6
0.9
27 AT1G51980 Insulinase (Peptidase family M16) protein 841627 At1g51980 4.6 4.8
3.2
784.2
0.9
3.1
1.8
-0.3
0.6
4.5
1.0
0.5
2.6
1.1
5.2
2.8
3.7
2.2
3.6
1.7
1.6
1.1
0.2
28 DET3 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) 837840 At1g12840 4.6 4.6
3.3
235.8
1.2
2.5
2.1
0.3
0.8
5.5
2.2
1.4
2.6
2.4
2.3
2.2
3.0
2.9
2.8
3.2
2.0
29 NDPK3 nucleoside diphosphate kinase 3 826702 At4g11010 4.6 3.9
4.1
1212.9
1.1
1.8
0.8
0.8
-0.3
2.6
0.7
0.2
0.1
-0.8
0.7
1.0
2.6
4.8
1.3
0.9
30 ENODL19 early nodulin-like protein 19 826900 At4g12880 4.6 4.2
3.7
173.1
0.8
2.0
3.2
2.2
1.3
0.8
2.1
0.7
5.3
-1.6
1.5
0.3
2.0
0.3
2.1
0.6
0.3

31 AT5G05820 Nucleotide-sugar transporter family protein 830467 At5g05820 4.5 3.9
4.0
270.2
4.1
2.8
1.5
2.2
0.3
1.6
2.4
1.5
2.2
1.3
3.3
2.5
3.1
2.3
3.1
2.6
1.8
3.8
32 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 817557 At2g30060 4.5 4.4
3.5
873.8
0.5
3.0
-0.1
0.6
1.1
2.3
0.4
0.2
2.1
1.4
4.4
1.0
3.0
1.5
2.9
1.6
1.1
0.6
2.2
1.9
33 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit 814736 At2g02050 4.5 4.2
3.7
76.3
1.1
3.7
0.9
-0.2
0.9
3.4
0.8
1.1
2.1
1.3
2.0
1.1
1.4
1.6
0.9
34 AT4G30010 ATP-dependent RNA helicase 829124 At4g30010 4.5 4.4
3.4
2791.1
2.1
1.1
0.6
-0.9
1.5
1.4
0.8
0.7
2.5
0.7
4.5
3.3
4.4
3.3
2.2
0.8
2.1
35 PYR6 P-loop containing nucleoside triphosphate hydrolases superfamily protein 832710 At5g26667 4.5 4.1







2.0
0.6
0.2
3.5
1.8
4.7
3.6
5.9
4.4
3.1
5.9
-1.0
3.8
2.6
36 AT1G77610 EamA-like transporter family protein 844096 At1g77610 4.5 4.4
3.3
238.8
0.5
4.0
2.4
0.2
-0.9
2.6
2.0
0.7
2.1
1.0
1.7
0.9
2.4
2.3
1.6
1.5
2.3
1.1
0.7
-0.6
37 CDI Nucleotide-diphospho-sugar transferases superfamily protein 842806 At1g64980 4.5 3.5
4.2
123.8
1.0
3.6
0.2
1.3
1.2
2.7
1.7
1.0
1.8
1.0
4.1
3.1
5.3
3.3
4.1
2.6
2.1
1.7
2.4
0.2
38 GAUT9 galacturonosyltransferase 9 820474 At3g02350 4.5 4.4
3.3
309.5
1.2
1.8
1.5
2.0
0.4
2.7
1.4
1.1
3.3
2.6
4.0
3.4
3.7
3.0
1.9
1.7
4.2
3.5
2.2
39 RFNR2 root FNR 2 839930 At1g30510 4.4 4.6
3.1
477.6
2.9
2.2
1.7
-0.3
1.8
1.8
-0.0
-1.0
0.4
-1.1
-0.7
-1.2
0.1
2.0
0.9
-0.1
40 AT2G35120 Single hybrid motif superfamily protein 818078 At2g35120 4.4 3.8
3.9
380.8
1.7
1.9
2.4
0.9
0.7
1.6
0.4
0.3
1.2
1.0
3.7
3.6
4.9
3.5
3.3
3.3
0.5
0.3
41 AT5G42860 late embryogenesis abundant protein, group 2 834297 At5g42860 4.4 4.0
3.7
103.5
1.5
2.0
4.7
1.4
0.7
2.3
2.5
2.1
2.7
2.5
2.1
-0.1
2.3
1.2
3.1
1.9
1.7
0.5
2.0
42 CAM5 calmodulin 5 817245 At2g27030 4.4 4.5
3.1
1223.5
1.4
1.3
2.0
0.9
1.1
0.9
0.8
0.8
2.0
2.0
5.5
4.6
5.1
4.1
3.3
3.0
4.8
3.5
2.4
2.3
43 VDAC2 voltage dependent anion channel 2 836886 At5g67500 4.4 3.4
4.2
89.4
1.0
4.2
2.3
-0.0
1.4
2.5
1.4
0.7
2.9
1.9
6.6
2.2
4.9
2.3
3.4
1.5
0.3
2.2
44 CAM6 calmodulin 6 832245 At5g21274 4.4 4.7







1.5
0.8
0.8
2.0
2.0
5.5
4.6
5.1
4.1
3.3
3.0
4.8
3.5
2.4
2.3
45 TUB9 tubulin beta-9 chain 827837 At4g20890 4.4 4.4
3.2
3145.5
2.9
0.7
1.1
0.9
-0.5
1.5
4.4
3.5
4.7
4.7
4.3
4.2
4.6
4.2
4.3
4.0
5.3
4.7
1.7
1.2
46 PHT3;1 phosphate transporter 3;1 831252 At5g14040 4.3 3.9
3.6
416.8
1.4
4.1
1.9
-0.1
-0.4
3.5
1.1
0.7
3.4
2.9
6.4
2.5
4.9
2.3
3.3
-0.5
2.6
1.1
3.1
2.0
47 TUF vacuolar ATP synthase subunit E1 826716 At4g11150 4.3 4.4
3.2
2521.5
0.4
1.0
0.4
-0.4
1.1
3.1
2.2
1.5
4.7
3.2
4.2
3.3
3.6
3.5
4.0
3.6
4.5
2.9
2.3
1.1
48 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family protein 842627 At1g63220 4.3 4.3
3.2
57.2
5.4
3.0
2.6
0.3
-0.5
2.0
1.9
1.3
1.5
1.3
1.8
1.6
2.0
0.6
1.3
1.7
1.0
49 AT2G22900 Galactosyl transferase GMA12/MNN10 family protein 816821 At2g22900 4.3 4.7
2.8
140.9
1.3
2.3
2.4
2.6
1.7
1.0
1.9
1.5
2.5
1.4
0.4
-0.0
-0.4
-0.4
-0.5
0.7
-0.0
0.2
50 emb1187 Protein kinase superfamily protein 817224 At2g26830 4.3 3.4
4.1
920.2
1.0
1.4
1.8
0.6
1.1
1.3
0.5
0.0
1.2
1.0
1.6
0.7
-0.9
1.6
0.4
The preparation time of this page was 2.1 [sec].