Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.4   100527058   uncharacterized LOC100527058 
 gma-r.6   100527058   uncharacterized LOC100527058 
 gma-m.5   100527058   uncharacterized LOC100527058 
 gma-u.4   100784752   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.4   100815376   superoxide dismutase [Cu-Zn], chloroplastic 
 mtr-u.4   11406426   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-u.4   18098251   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-u.4   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 ath-u.4   CSD2   copper/zinc superoxide dismutase 2 
 osa-u.4   4346329   superoxide dismutase [Cu-Zn], chloroplastic-like 

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Top 50 coexpressed genes to 100527058 (gma-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gmx4146   Peroxisome  3 139 3.01
 gmx260   Glycine, serine and threonine metabolism  2 104 2.03
 gmx630   Glyoxylate and dicarboxylate metabolism  2 125 -
 gmx1240   Biosynthesis of cofactors  3 466 -
 gmx3010   Ribosome  3 582 -

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gma:LOC100527058 (uncharacterized LOC100527058) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.4
for
100527058
gma-r.6
for
100527058
gma-m.5
for
100527058
gma-u.4
for
100784752
gma-u.4
for
100815376
mtr-u.4
for
11406426
ppo-u.4
for
18098251
ppo-u.4
for
7491174
ath-u.4
for
CSD2
osa-u.4
for
4346329
1 HMA8 chloroplast copper-translocating HMA8 P-ATPase 100127402 GLYMA_06G056300 5.3 2.3
 5.4
 3.4
 4.7
 3.4
 3.0
-1.7
 2.2
-0.1
 1.2
 0.4
2 LOC100500547 photosynthetic NDH subunit of lumenal location 4-like 100500547 GLYMA_08G139100 4.9 3.1
 4.1
 0.0
 0.2
 1.2
 0.4
 1.2
 0.8
 2.1
3 LOC100305732 superoxide dismutase [Cu-Zn] 100305732 GLYMA_03G242900 4.9 2.9
 4.2
 6.8
4.2
 7.8
4.6
 7.4
 7.7
7.6
 7.2
4.9
 20.6
 5.0
3.3
4 LOC100815376 superoxide dismutase [Cu-Zn], chloroplastic 100815376 GLYMA_11G192700 4.8 4.9
17.4
4.0
 17.4
4.8
9.2
 9.2

5 CCS Cu/Zn-superoxide dismutase copper chaperone 547617 GLYMA_05G055000 4.6 3.0
 3.8
 5.2
 6.5
 8.3
 7.0
6.6
 5.4
4.3
 23.5
 7.8
6 LOC100810816 NADPH-dependent alkenal/one oxidoreductase, chloroplastic 100810816 GLYMA_08G286800 4.5 1.8
 4.8
 0.7
-0.1
 2.2
1.5
 1.5
1.4
 -0.0
-0.7
 0.7
-0.1
 0.4
 1.7
7 LOC100305918 psbP-like protein 1, chloroplastic 100305918 GLYMA_18G286500 4.5 3.1
 3.5
 0.5
-0.0
 0.3
-0.3
 1.6
 -0.0
 1.1
 1.4
 2.6
1.9
8 LOC100780886 cytochrome c oxidase subunit 5b-2, mitochondrial-like 100780886 GLYMA_08G209700 4.5 3.3
 3.3
 4.7
2.6
 6.5
3.6
 10.5
5.1
 1.4
-3.5
 0.9
-2.9
 11.6
1.3
 4.5
0.4
9 LOC100781928 glyoxylate/succinic semialdehyde reductase 2, chloroplastic 100781928 GLYMA_13G349100 4.5 2.8
 3.7
 2.2
 2.9
 4.2
 0.2
 1.5
 1.3
 2.7
10 LOC100783058 30S ribosomal protein S31, chloroplastic 100783058 GLYMA_01G114800 4.4 2.7
 3.7
 2.6
2.3
 4.0
3.2
 4.0
 2.5
 3.4
 3.6
 6.1
11 LOC100785365 probable polyamine aminopropyl transferase 100785365 GLYMA_08G161400 4.3 4.2
1.8
 0.6
 2.8
 -0.4
 1.9
 -0.6
 2.5
12 LOC100787350 phosphomethylpyrimidine synthase, chloroplastic 100787350 GLYMA_18G065700 4.3 3.1
 3.1
 0.2
-1.0
 -0.4
-1.3
 0.1
 0.8
0.7
 0.9
0.6
 0.0
 -1.1
13 LOC100500099 uncharacterized LOC100500099 100500099 GLYMA_18G049200 4.2 3.2
 2.8
 2.5
1.8
 3.9
3.4
 3.4
 1.8
1.0
 1.5
0.7
 3.4
 5.1
14 LOC100305469 uncharacterized LOC100305469 100305469 GLYMA_19G012900 4.2 2.7
 3.4
 1.9
1.7
 3.5
2.8
 2.3
 1.6
 2.9
 2.1
 3.0
15 LOC100778569 50S ribosomal protein L18, chloroplastic 100778569 GLYMA_15G185000 4.0 2.2
 3.6
 2.1
 2.9
 3.9
 1.6
1.0
 1.2
1.1
 2.6
 4.0
16 LOC100799825 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial 100799825 GLYMA_08G143100 4.0 2.7
 3.2
 1.7
0.8
 2.4
1.3
 2.2
-0.2
 1.0
1.0
 1.5
1.2
 0.9
-0.1
 3.4
-0.9
17 LOC100784752 superoxide dismutase [Cu-Zn], chloroplastic 100784752 GLYMA_12G081300 4.0 4.9
 0.9
 17.4
4.0
 17.4
4.8
9.2
 9.2

18 LOC100803204 aspartokinase 1, chloroplastic 100803204 GLYMA_16G049300 3.9 2.2
 3.5
 1.0
0.3
 0.6
0.6
 0.3
-0.8
 -0.1
-0.6
 1.2
0.4
 1.2
0.8
 1.3
-0.3
19 LOC100798628 uncharacterized LOC100798628 100798628 GLYMA_02G292400 3.9 4.0
-0.0
-1.4
 0.8
-0.0
 2.7
 0.5
 1.1
 0.3
 -0.0
20 LOC100812488 uncharacterized LOC100812488 100812488 GLYMA_10G157000 3.8 2.6
 3.0
 2.3
 0.7
 2.8
 1.0
 2.0
 1.4
 1.7
21 LOC100782032 cyclase-like protein 2 100782032 GLYMA_10G263400v4 3.8 2.8
 2.8
 0.8
0.7
 1.1
0.9
 2.3
0.8
 0.2
0.0
 -0.0
-0.4
 1.0
0.5
 1.8
0.9
22 ICS1 isochorismate synthase, chloroplastic 100799025 GLYMA_03G070600 3.8 2.9
 2.6
 0.7
-0.7
 0.6
0.3
 1.5
 -1.1
 0.7
 0.1
-0.9
 1.0
23 LOC732576 lectin 732576 GLYMA_02G156800 3.8 2.0
 3.5
 0.1
-0.4
 0.3
0.1
 1.2



24 LOC100305588 putative plantacyanin 100305588 GLYMA_06G121100 3.8 2.4
 3.1
 3.5
3.1
 3.1
1.9
 3.1
1.2
 2.6
1.5
 2.3
0.4
 7.6
 1.7
1.6
25 LOC100798877 photosynthetic NDH subunit of lumenal location 1, chloroplastic 100798877 GLYMA_20G239700 3.8 3.6
1.1
0.6
 1.9
1.5
 0.5
 -1.5
 0.4
 0.7
 0.2
26 LOC100784188 protein LOW PSII ACCUMULATION 1, chloroplastic 100784188 GLYMA_03G212900 3.8 2.6
 2.9
 0.7
0.3
 1.5
0.6
 2.6
 1.3
 3.3
 0.7
 2.1
27 LOC100305797 uncharacterized LOC100305797 100305797 GLYMA_04G147800 3.8 3.4
1.8
1.6
 2.6
2.5
 4.3
 1.5
0.5
 2.5
-0.2
 2.2
 4.2
28 LOC100812066 photosystem I chlorophyll a/b-binding protein 6, chloroplastic 100812066 GLYMA_15G179400 3.8 2.5
 3.0
 1.3
-1.2
 -0.4
-0.9
 2.1
 0.3
 1.4
 1.1
 1.8
29 LOC100817380 thylakoid lumenal 17.9 kDa protein, chloroplastic 100817380 GLYMA_06G169300 3.8 2.7
 2.8
 0.7
0.3
 1.7
0.9
 1.6
 0.7
 2.4
 2.1
 0.4
30 LOC100803176 dihydrolipoyl dehydrogenase 2, chloroplastic 100803176 GLYMA_15G143100 3.8 3.6
 1.9
 1.5
0.4
 1.4
0.9
 2.2
1.1
 1.8
1.2
 2.2
0.9
 2.2
0.7
 2.9
-0.5
31 LOC100306139 uncharacterized LOC100306139 100306139 GLYMA_08G285100 3.8 2.8
 2.6
 -0.6
-0.9
 0.2
0.0
0.0
-0.6
 0.8
-0.8
 0.4
32 LOC100786063 7-deoxyloganetin glucosyltransferase-like 100786063 GLYMA_08G178200v4 3.8 2.7
 2.8
 0.2
0.1
 0.4
-0.3
 1.4
1.2



33 LOC100782581 signal recognition particle 54 kDa protein, chloroplastic 100782581 GLYMA_03G196900 3.8 2.7
 2.8
 1.8
0.9
 2.9
1.2
 4.2
 0.7
-0.4
 1.4
1.0
 0.5
 3.7
2.1
34 LOC100777588 GTPase Der 100777588 GLYMA_12G057600 3.7 3.0
 2.4
 0.6
 2.7
 0.6
 0.8
 1.0
 0.5
 2.6
35 LOC100306534 uncharacterized LOC100306534 100306534 GLYMA_04G202500 3.7 2.1
 3.4
 1.2
-0.3
 1.2
0.6
 2.4
1.9
 1.7
1.4
 1.7
1.6
 1.4
1.0
 2.5
1.3
36 LOC100778234 uncharacterized LOC100778234 100778234 GLYMA_17G071000 3.7 2.3
 3.2
 1.4
 0.9
 -0.7
 0.9
0.2
 2.2
1.4
 0.3
 1.8
37 LOC100782083 dihydrodipicolinate reductase-like protein CRR1, chloroplastic 100782083 GLYMA_20G155600 3.7 3.4
0.4
-0.6
 0.7
0.0
 1.2
 0.5
 1.1

38 LOC100804040 protease Do-like 8, chloroplastic 100804040 GLYMA_13G063400 3.7 3.5
1.2
 2.4
 1.5
 0.5
 1.7
 1.3
 1.6
39 LOC100500055 rhodanese-like domain-containing protein 9, chloroplastic 100500055 GLYMA_03G142800 3.7 2.3
 3.1
 1.6
0.4
 0.8
0.3
 2.2
 -0.4
 0.4
 0.6
 1.2
40 LOC100809934 uncharacterized protein ycf23 100809934 GLYMA_08G083700 3.7 3.7
1.9
-0.7
 1.9
0.6
 1.2
 0.3
 1.5
2.5
41 LOC100790943 uncharacterized LOC100790943 100790943 GLYMA_05G129100 3.7 3.3
 2.1
 1.9
-0.7
 1.9
0.6
 1.2
 0.3
 1.5
2.5
42 LOC100800098 (S)-ureidoglycine aminohydrolase 100800098 GLYMA_05G066500 3.7 2.1
 3.2
 1.6
1.0
 0.8
0.2
 1.9
 0.8
 0.9
 1.0
 0.6
43 LOC100783567 RNA recognition motif (RRM) domain-containing protein 100783567 GLYMA_15G271200 3.7 2.6
 2.7
 1.7
0.9
 3.3
2.5
 2.4
 1.1
 1.9
 2.6
 3.4
44 LOC100803191 uncharacterized LOC100803191 100803191 GLYMA_08G219100 3.7 3.7
 1.7
 1.8
1.0
 2.9
2.0
 3.5
1.9
 0.9
-0.1
 1.6
1.2
 1.2
 1.8
45 LOC100818389 (S)-coclaurine N-methyltransferase 100818389 GLYMA_04G054100 3.7 3.6
1.2
 -0.2
 3.0
 0.3
 1.2
 0.5
0.3
 1.6
46 LOC100776365 psbP domain-containing protein 5, chloroplastic-like 100776365 GLYMA_04G072300 3.7 2.1
 3.2
 1.9
0.6
 1.8
1.0
 3.5
 1.9
 2.5
 0.9
 1.7
47 LOC100775556 short-chain dehydrogenase TIC 32, chloroplastic 100775556 GLYMA_09G135200 3.6 1.9
 3.4
 2.0
1.2
 1.5
1.3
 1.7
1.4
 1.3
1.1
 1.8
1.1
 1.5
1.1
 1.5
0.6
48 LOC100786990 2-cys peroxiredoxin 100786990 GLYMA_10G078400 3.6 2.7
 2.6
 2.9
2.7
 4.3
4.2
 7.2
5.5
 2.7
2.3
 3.8
3.4
 4.0
2.1
 7.3
49 LOC100813729 pentatricopeptide repeat-containing protein At3g06430, chloroplastic 100813729 GLYMA_17G034600 3.6 3.7
 1.6
 1.6
1.1
 3.6
2.7
 2.2
1.9
 1.3
0.9
 1.7
1.5
 0.4
 1.4
50 LOC100500072 uncharacterized LOC100500072 100500072 GLYMA_05G218800 3.6 2.4
 2.9
 2.2
1.6
 3.1
3.1
 2.5
 0.8
 1.5
 2.8
 4.4
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