Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.4   PURD   phosphoribosylamine--glycine ligase 
 gma-r.6   PURD   phosphoribosylamine--glycine ligase 
 gma-m.5   PURD   phosphoribosylamine--glycine ligase 
 ppo-u.4   18098330   phosphoribosylamine--glycine ligase 
 ppo-u.4   112327301   phosphoribosylamine--glycine ligase-like 
 ath-u.4   PUR2   Glycinamide ribonucleotide (GAR) synthetase 
 sly-u.4   101265372   phosphoribosylamine--glycine ligase 
 osa-u.4   4344854   phosphoribosylamine--glycine ligase 
 osa-u.4   4351721   phosphoribosylamine--glycine ligase 

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Top 50 coexpressed genes to PURD (gma-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gmx1230   Biosynthesis of amino acids  8 369 7.37
 gmx230   Purine metabolism  7 150 8.78
 gmx3010   Ribosome  6 563 3.89
 gmx1210   2-Oxocarboxylic acid metabolism  4 83 5.25
 gmx270   Cysteine and methionine metabolism  4 178 3.95

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gma:PURD (phosphoribosylamine--glycine ligase) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.4
for
PURD
gma-r.6
for
PURD
gma-m.5
for
PURD
ppo-u.4
for
18098330
ppo-u.4
for
112327301
ath-u.4
for
PUR2
sly-u.4
for
101265372
osa-u.4
for
4344854
osa-u.4
for
4351721
1 LOC100801209 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic 100801209 GLYMA_14G178900 8.6 7.4
 5.0
 2.5
 1.7
 4.8
 3.4
 4.6
 1.8
2 LOC100805437 thioredoxin-like fold domain-containing protein MRL7, chloroplastic 100805437 GLYMA_05G157700 8.0 6.0
 5.7
 2.0
 2.7
 1.2
 1.9
 2.1
 0.5
3 LOC100794589 probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 100794589 GLYMA_18G036300v4 7.6 7.9
3.2
1.3
 3.2
0.9
 4.4
 4.5
 7.1
3.2
 0.3
-0.7
4 LOC100779947 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 100779947 GLYMA_13G028400 7.6 7.8
0.9
0.7
 0.5
0.5
 3.5
2.3
 4.8
0.2
 1.1
0.1
 -0.2
-0.4
5 LOC100808892 enoyl-CoA hydratase-like 100808892 GLYMA_17G222800 7.5 5.6
 5.3
 4.5
2.4
 3.9
3.0
 1.5
0.2
 2.8
-0.5
 3.1
 0.2
6 LOC100812763 ketol-acid reductoisomerase, chloroplastic-like 100812763 GLYMA_13G291300 7.5 7.8
2.3
0.2
 1.8
0.2
 4.2
 2.2
1.7
 4.6
0.2
 -0.0
-0.3
7 LOC100805369 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic 100805369 GLYMA_02G211300 7.4 7.6
2.5
 1.7
 4.8
 3.4
 4.6
 1.8
8 AK-HSDH aspartokinase-homoserine dehydrogenase 548017 GLYMA_08G107800 7.1 5.3
 5.1
 3.0
-0.3
 2.4
-0.7
 3.7
1.4
 4.3
0.0
 4.0
1.4
 1.2
-1.2
9 LOC100800927 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 100800927 GLYMA_02G190600 7.1 5.2
 5.1
 2.7
 2.6
 -0.6
 1.5
 0.3
0.1
 -0.6
-0.9
10 LOC547631 cysteine synthase 547631 GLYMA_11G005800 7.0 4.9
 5.3
 1.9
1.9
 2.3
2.1
 1.0
0.7
 0.8
0.4
 0.7
0.6
 2.2
-0.0
11 LOC100798293 acetylornithine aminotransferase, mitochondrial 100798293 GLYMA_10G255400 6.7 5.5
 4.3
 3.5
1.8
 2.9
1.4
 3.6
 2.4
 2.1
1.2
 -0.3
-0.7
12 LOC100796918 28S ribosomal protein S9, mitochondrial-like 100796918 GLYMA_12G020800 6.6 6.1
 3.6
 3.2
 2.5
 3.4
 2.6
 2.3
 -0.0
13 LOC100818533 adenylosuccinate lyase 100818533 GLYMA_02G254000 6.6 6.6
2.0
 1.7
 3.0
1.9
 5.9
 4.3
 -0.2
14 LOC100813273 40S ribosomal protein S3a 100813273 GLYMA_20G149400 6.6 5.9
 3.7
 2.2
2.1
 2.0
2.0
 3.0
0.6
 3.7
2.6
 4.2
2.5
 0.7
0.4
15 LOC100801303 hydroquinone glucosyltransferase 100801303 GLYMA_03G091200 6.5 6.2
 3.3
 3.8
-0.2
 4.1
-0.3
 1.7
0.9
 0.4
-1.7
 0.2
 -1.6
16 LOC106794272 putative ribonuclease H protein At1g65750 106794272 GLYMA_01G140000 6.5 6.7




-0.2
 0.5
17 LOC100809943 T-complex protein 1 subunit zeta 1 100809943 GLYMA_08G364000 6.5 6.6
2.6
2.4
 2.0
1.7
 2.9
2.9
 3.8
3.7
 2.7
 0.2
18 LOC100780260 bifunctional purine biosynthesis protein PurH 100780260 GLYMA_04G133100 6.4 6.3
 3.1
 3.1
 2.4
 6.2
 6.6
 7.4
 0.1
19 LOC100500532 bS6_MRPS6 domain-containing protein 100500532 GLYMA_01G008800 6.4 5.6
 3.7
 1.7
 1.2
 1.7
 2.4
1.1
 2.3
 0.4
20 LOC100776891 elongation factor Tu, mitochondrial-like 100776891 GLYMA_19G153200 6.3 5.2
 4.0
 4.0
3.0
 3.4
2.5
 3.7
 5.1
3.9
 2.9
 0.5
21 LOC100776541 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 100776541 GLYMA_20G055900 6.3 4.9
 4.3
 0.9
0.7
 0.5
0.5
 3.5
2.3
 4.8
0.2
 1.1
0.1
 -0.2
-0.4
22 ACCA-1 alpha-carboxyltransferase aCT-1 precursor 547859 GLYMA_18G195700 6.3 5.4
 3.7
 1.0
0.7
 0.9
0.7
 0.7
 3.2
-0.4

23 LOC100806689 putative dihydroxy-acid dehydratase, mitochondrial-like 100806689 GLYMA_13G207900 6.3 4.4
 4.7
 1.9
1.9
 2.0
1.9
 3.7
 2.5
2.1
 4.5
 0.5
24 LOC100802143 T-complex protein 1 subunit gamma 100802143 GLYMA_16G208700 6.2 5.4
 3.5
 2.9
2.6
 3.0
2.4
 1.1
 4.9
 2.4
1.7
 0.8
-0.3
25 LOC100818572 probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 100818572 GLYMA_11G221100 6.1 6.3
3.2
1.3
 3.2
0.9
 4.4
 4.5
 7.1
3.2
 0.3
-0.7
26 LOC100818638 probable dual-specificity RNA methyltransferase RlmN 100818638 GLYMA_14G068600 6.1 5.3
 3.5
 2.2
 1.9
 3.0
 3.9
 2.6
 0.7
27 LOC100305827 uncharacterized LOC100305827 100305827 GLYMA_14G191200 6.1 5.9
1.8
1.2
 1.5
1.4
 -0.9
 1.5
 -1.4
 0.3
28 LOC100805249 phenylalanine--tRNA ligase beta subunit, cytoplasmic 100805249 GLYMA_05G016400 6.0 5.0
 3.8
 1.6
0.6
 1.6
1.1
 1.3
 0.9
 1.9
 0.5
29 LOC100799921 ketol-acid reductoisomerase, chloroplastic 100799921 GLYMA_12G210000 6.0 4.6
 4.2
 2.3
0.2
 1.8
0.2
 4.2
 2.2
1.7
 4.6
0.2
 -0.0
-0.3
30 LOC100782808 glycine-rich RNA-binding protein blt801 100782808 GLYMA_05G020900 6.0 5.6
 3.1
 3.5
3.4
 3.6
3.0
 5.1
3.3
 3.9
3.7
 3.8
3.0
 0.7
0.3
31 LOC100785668 60S ribosomal protein L5 100785668 GLYMA_13G280200 6.0 5.8
2.5
2.2
 2.0
1.9
 1.4
1.1
 3.8
3.5
 2.7
1.8
 0.4
0.4
32 LOC100813370 T-complex protein 1 subunit gamma 100813370 GLYMA_09G158200 5.9 6.0
2.9
2.6
 3.0
2.4
 1.1
 4.9
 2.4
1.7
 0.8
-0.3
33 LOC100818408 ADP,ATP carrier protein 3, mitochondrial 100818408 GLYMA_12G116300 5.9 5.7
1.9
1.2
 1.8
1.5
 1.6
1.5
 3.1
2.5
 3.4
1.1
 -0.4
-0.7
34 LOC100819132 60S ribosomal protein L3 100819132 GLYMA_20G168100 5.9 5.8
 2.9
 2.8
2.2
 2.4
2.1
 3.9
2.5
 4.6
1.0
 3.1
1.4
 0.1
-0.0
35 LOC100790263 phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial 100790263 GLYMA_05G192900 5.9 6.2
 2.4
 2.6
1.3
 1.8
1.0
 6.6
 5.0
 4.7
 0.4
36 LOC100787558 sulfite oxidase 100787558 GLYMA_19G071800 5.9 4.2
 4.5
 1.0
 0.8
 2.1
 -0.5
 1.1
0.3
 3.4
-1.6
37 LOC100819739 T-complex protein 1 subunit theta 100819739 GLYMA_16G153200 5.9 5.8
 2.8
 2.5
2.1
 2.4
1.3
 2.7
 4.0
 2.5
 -0.6
38 LOC100777660 nuclear pore complex protein NUP93A 100777660 GLYMA_15G010000 5.9 5.2
 3.4
 1.4
0.7
 1.5
0.4
 1.6
-0.5
 3.2
 2.3
 -0.3
39 LOC100777616 nuclear pore complex protein NUP205 100777616 GLYMA_06G222100 5.9 5.1
 3.5
 0.7
 0.4
 1.2
 1.6
 1.0
 -0.3
40 LOC100800404 uncharacterized LOC100800404 100800404 GLYMA_18G017100 5.9 6.1
 2.5
 3.6
 3.8
 2.3
 1.4
 4.8
 0.8
41 LOC100794780 T-complex protein 1 subunit beta 100794780 GLYMA_11G185500 5.9 5.8
4.5
3.4
 3.9
3.2
 1.4
 4.1
 4.2
2.0
 0.4
-0.1
42 LOC100820559 methyltransferase-like protein 17, mitochondrial 100820559 GLYMA_13G191700 5.9 6.0
2.5
 2.2
 2.1
 1.2
 3.6
 -0.7
43 LOC100807195 multiple organellar RNA editing factor 1, mitochondrial 100807195 GLYMA_12G169200 5.8 5.9
3.7
3.6
 3.8
2.6
 3.1
3.0
 3.8
 1.7
 0.2
44 EF1BGAMMA3 EF1Bgamma class glutathione S-transferase 100787125 GLYMA_16G001900 5.8 5.7
3.7
2.8
 3.1
2.8
 2.3
1.7
 4.0
2.4
 3.8
2.4
 0.4
0.3
45 LOC100793494 T-complex protein 1 subunit theta 100793494 GLYMA_02G071900 5.8 5.7
2.5
2.1
 2.4
1.3
 2.7
 4.0
 2.5
 -0.6
46 LOC100817986 fumarylacetoacetase 100817986 GLYMA_09G010000 5.8 5.2
 3.2
 1.5
 1.8
 2.3
 1.2
-0.6
 0.8
 -0.5
47 LOC100804251 elongation factor 2 100804251 GLYMA_08G170000 5.7 5.8
 2.5
 3.0
2.5
 3.1
2.3
 2.5
0.5
 4.5
 3.2
1.7
 1.6
0.9
48 LOC100797805 T-complex protein 1 subunit beta 100797805 GLYMA_12G087300 5.7 6.2
 2.1
 4.5
3.4
 3.9
3.2
 1.4
 4.1
 4.2
2.0
 0.4
-0.1
49 LOC100786762 transcription factor bHLH140 100786762 GLYMA_01G117800 5.7 5.2
 3.1
 1.5
 1.1
 -0.2
 4.0
 -1.0
 0.3
50 LOC100526952 ribosomal L18/L5e 100526952 GLYMA_02G307100 5.7 4.1
 4.1
 2.6
 2.3
 -0.9
 2.5
 0.6
0.4
 0.8
-0.5
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