Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.4   11435542   uncharacterized LOC11435542 
 mtr-r.4   11435542   uncharacterized LOC11435542 
 mtr-m.5   11435542   uncharacterized LOC11435542 
 gma-u.4   100305678   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ppo-u.4   7456189   uncharacterized LOC7456189 
 ath-u.4   AT3G01660   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 sly-u.4   101257418   uncharacterized LOC101257418 
 osa-u.4   4336185   uncharacterized LOC4336185 

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Top 50 coexpressed genes to 11435542 (mtr-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mtr195   Photosynthesis  3 66 3.39
 mtr130   Ubiquinone and other terpenoid-quinone biosynthesis  2 41 2.44
 mtr61   Fatty acid biosynthesis  1 52 -
 mtr30   Pentose phosphate pathway  1 56 -
 mtr1240   Biosynthesis of cofactors  2 267 -

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mtr:LOC11435542 (uncharacterized LOC11435542) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.4
for
11435542
mtr-r.4
for
11435542
mtr-m.5
for
11435542
gma-u.4
for
100305678
ppo-u.4
for
7456189
ath-u.4
for
AT3G01660
sly-u.4
for
101257418
osa-u.4
for
4336185
1 LOC11440145 peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic 11440145 MTR_3g060750 6.1 3.7
 6.0
 0.1
0.1
-0.4
 4.0
 0.5
2 LOC11443179 uncharacterized LOC11443179 11443179 MTR_3g061480 5.6 3.2
 5.8
 0.9
 1.6
 5.7
 3.3
3 LOC11425307 uncharacterized LOC11425307 11425307 MTR_5g091560 4.7 4.5
 3.1
 0.7
-0.2
 0.2
 1.1
 1.0
 -0.8
4 LOC11445197 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 11445197 MTR_8g032260 4.7 1.5
 6.1
 4.1
0.9
 0.9
0.8
 2.5
 2.3
 3.4
5 LOC11442672 photosynthetic NDH subunit of subcomplex B 2, chloroplastic 11442672 MTR_7g085490 4.7 3.1
 4.4
 2.6
1.7
 1.4
 4.1
 2.2
 5.9
6 LOC25493090 triose phosphate/phosphate translocator, chloroplastic 25493090 MTR_4g088350 4.6 4.8
1.7
1.0
 1.5
1.1
 0.3
 2.8
 1.2
1.0
7 LOC11417190 serotonin N-acetyltransferase 2, chloroplastic 11417190 MTR_1g018030 4.3 1.7
 5.2
 2.0
 3.3
1.9
 2.5
8 LOC11416110 photosystem II core complex proteins psbY, chloroplastic 11416110 MTR_3g086230 4.2 2.5
 4.3
 2.3
1.5
 2.2
1.1
 0.6
 1.9
 3.3
9 LOC11415133 transcription termination factor MTEF1, chloroplastic 11415133 MTR_2g049780 4.2 2.5
 4.3
 1.9
1.4
 3.3
1.5
 4.6
1.9
 2.1
1.6
 -0.4
10 LOC11432837 photosynthetic NDH subunit of subcomplex B 3, chloroplastic 11432837 MTR_1g011510 4.1 3.5
 3.2
 1.1
 1.4
 -0.1
1.0
11 LOC11410188 probable ribose-5-phosphate isomerase 4, chloroplastic 11410188 MTR_2g032540 4.1 1.5
 5.1
 1.3
 1.1
 2.8
 3.6
12 LOC11423197 uncharacterized LOC11423197 11423197 MTR_7g117970 4.0 1.8
 4.6
 2.0
1.5
 3.5
 0.1
 1.7
 2.0
13 LOC11433497 uncharacterized LOC11433497 11433497 MTR_3g105050 4.0 1.6
 4.8
 1.8
 2.2
 1.2
 4.0
 1.0
14 LOC11437066 uncharacterized LOC11437066 11437066 MTR_5g091960 4.0 2.1
 4.3
 0.3
0.2
 1.2
 1.9
 1.3
15 LOC11421286 probable alpha-mannosidase At5g13980 11421286 MTR_3g098650 4.0 1.9
 4.4
 -0.1
-0.8
 0.0
-0.4
 -0.6
-1.2
 0.5
 -1.1
16 LOC11445773 uncharacterized LOC11445773 11445773 MTR_3g026020 3.9 1.5
 4.8
 2.8
2.2
 2.1
 0.7
 1.2
 2.0
17 LOC25501722 lipoxygenase 6, chloroplastic 25501722 MTR_8g080230 3.9 4.4
0.5
 -0.6
-1.0
 -0.1
 -0.2
18 LOC11429745 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic 11429745 MTR_1g072260 3.9 2.2
 4.1
 3.8
3.2
 2.4
1.5
 1.5
 5.4
 4.5
19 LOC11429223 probable plastid-lipid-associated protein 4, chloroplastic 11429223 MTR_2g007300 3.8 4.2
 1.9
 2.5
2.2
 2.2
-0.2
 2.8
2.6
 4.1
 0.3
20 LOC11442409 uncharacterized LOC11442409 11442409 3.8 2.9
 3.2
 2.7
 1.5
1.4
 1.1
 1.1
0.6
 2.8
-0.1
21 LOC11408163 uncharacterized LOC11408163 11408163 MTR_8g075960 3.8 1.9
 4.2
 4.0
3.3
 1.1
2.8
 3.8
22 LOC11405827 oxygen-evolving enhancer protein 1, chloroplastic 11405827 MTR_5g018670 3.8 2.9
 3.2
 2.2
2.0
 1.8
1.4
 0.7
-0.0
 2.6
 2.4
23 LOC11425108 uncharacterized LOC11425108 11425108 MTR_1g100800 3.7 1.9
 4.1
 1.6
1.3
 0.7
 5.8
2.3
 1.3
24 LOC11440441 rhodanese-like domain-containing protein 9, chloroplastic 11440441 MTR_7g092820 3.7 2.6
 3.3
 2.3
2.2
 0.7
 -0.8
 3.4
 1.2
25 LOC11419625 photosystem II 5 kDa protein, chloroplastic 11419625 MTR_3g030860 3.7 2.0
 4.0
 2.8
2.4
 1.5
1.1
 0.9
 1.2
 2.0
26 LOC11434194 rubredoxin 11434194 MTR_7g114590 3.7 2.5
 3.5
 2.1
 1.8
0.9
 4.2
 2.6
 3.2
27 LOC11420975 uncharacterized LOC11420975 11420975 MTR_2g101420 3.7 2.6
 3.4
 3.0
2.5
 0.6
 0.6
1.1
28 LOC11420725 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic 11420725 MTR_3g096290 3.7 2.1
 3.8
 2.9
 2.2
 2.7
 5.5
 4.9
29 LOC11409239 long chain acyl-CoA synthetase 9, chloroplastic 11409239 MTR_1g030290 3.7 2.2
 3.7
 -0.4
-1.3
 0.5
-0.1
 -1.5
 -0.2
 0.3
-0.4
30 LOC11439196 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic 11439196 MTR_4g074590 3.7 2.6
 3.3
 4.4
 0.3
 4.8
 2.6
 3.2
31 LOC11405533 photosynthetic NDH subunit of lumenal location 3, chloroplastic 11405533 MTR_2g082580 3.6 1.0
 4.8
 3.2
2.5
 1.1
 8.0
 2.9
 4.2
32 LOC11427773 uncharacterized LOC11427773 11427773 MTR_2g097680 3.6 3.5
1.2
-0.0
 2.0
 3.4
 2.5
33 LOC11420491 photosynthetic NDH subunit of subcomplex B 1, chloroplastic 11420491 MTR_4g007080 3.6 2.5
 3.2
 3.4
3.2
 1.8
 2.5
 4.3
 3.8
34 LOC11434147 uncharacterized LOC11434147 11434147 MTR_1g071380 3.6 3.1
 2.6
 1.2
-0.0
 2.0
 3.4
 2.5
35 LOC25489423 phosphatidylinositol transfer protein 3 25489423 MTR_3g074050 3.6 4.3
0.8
0.7
 -1.5
-2.0
 -0.1
-1.1
 1.1
 -0.1
-1.3
36 LOC11410823 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic 11410823 MTR_4g094100 3.5 2.6
 3.1
 2.4
0.8
 1.0
 2.7
 3.2
 -0.4
37 LOC11434136 RNA polymerase sigma factor sigF, chloroplastic 11434136 MTR_1g063850 3.5 2.1
 3.5
 3.0
2.6
 0.5
 3.6
 2.0
 1.8
38 LOC25482643 pentatricopeptide repeat-containing protein At5g13770, chloroplastic 25482643 MTR_1g033840 3.5 3.2
2.6
2.0
 1.6
1.4
 0.7
 2.2
 -0.4
39 LOC25492359 cyclin-dependent protein kinase inhibitor SMR2 25492359 MTR_4g056580 3.5 3.7
-0.4
-0.4
1.0
 0.3
-0.6
40 LOC11420788 peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic 11420788 MTR_1g061850 3.5 2.2
 3.4
 2.9
1.5
 1.6
 1.9
 1.9
 1.3
41 LOC11428853 uncharacterized LOC11428853 11428853 MTR_5g093240 3.4 3.0
 2.6
 0.2
-0.4
 2.6
 3.2
2.1
42 LOC11408205 peroxidase P7 11408205 MTR_3g072210 3.4 3.5
 2.1
 0.4



43 LOC11416800 protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 11416800 MTR_4g064750 3.4 1.6
 4.0
 1.5
1.4
 2.9
2.0
 0.2
 3.2
 1.2
44 LOC11439713 isochorismate synthase 2, chloroplastic 11439713 MTR_4g076520 3.4 2.4
 3.2
 1.1
0.7
 1.6
 -0.7
-0.7
 1.1
 1.6
45 LOC11408903 photosynthetic NDH subunit of subcomplex B 5, chloroplastic 11408903 MTR_5g042420 3.4 1.4
 4.2
 4.4
 3.7
 0.7
 4.9
 2.6
46 LOC11409580 uncharacterized LOC11409580 11409580 MTR_5g073620 3.4 1.7
 3.8




47 LOC11441325 major pollen allergen Ole e 1 11441325 MTR_7g027020 3.4 2.6
 2.9
 1.0
0.8
 0.4
0.0
 4.0
1.7
 0.4
 1.2
48 LOC11434295 uncharacterized LOC11434295 11434295 MTR_3g014680 3.4 2.8
 2.7
 2.2
-0.7
 -0.3
-1.9
0.4
 0.3
49 LOC11412540 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 11412540 MTR_6g032880 3.4 1.8
 3.7
 1.7
 1.9
 3.4
 2.1
 2.7
50 LOC11434981 28 kDa ribonucleoprotein, chloroplastic 11434981 MTR_1g045510 3.4 1.4
 4.0
 3.9
3.5
 2.0
0.5
 3.1
 3.3
 2.6
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