Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.4   25492469   pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 mtr-r.4   25492469   pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 gma-u.4   100776556   pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 ppo-u.4   7462764   pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 ath-u.4   AT1G07740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.4   109118966   pentatricopeptide repeat-containing protein At1g07740, mitochondrial 

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Top 50 coexpressed genes to 25492469 (mtr-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mtr3040   Spliceosome  8 182 8.26
 mtr3250   Viral life cycle - HIV-1  1 36 -
 mtr770   Pantothenate and CoA biosynthesis  1 48 -
 mtr3015   mRNA surveillance pathway  2 124 -
 mtr1240   Biosynthesis of cofactors  1 267 -

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mtr:LOC25492469 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.4
for
25492469
mtr-r.4
for
25492469
gma-u.4
for
100776556
ppo-u.4
for
7462764
ath-u.4
for
AT1G07740
sly-u.4
for
109118966
1 LOC11405951 RNA-binding protein 25 11405951 MTR_5g034430 8.4 9.7
 -0.4
-0.9
 -0.8
-1.2
 -0.0
 -0.9
2 LOC11441947 pentatricopeptide repeat-containing protein At5g14080 11441947 MTR_7g027940 7.6 8.7
 3.6
 2.1
 0.4
 2.2
3 LOC25493883 DNAJ protein JJJ1 homolog 25493883 MTR_4g109510 6.8 7.6
 1.0
0.1
 -0.2
 0.7
 1.0
-0.5
4 LOC11441810 dephospho-CoA kinase 11441810 MTR_2g014120 6.7 7.3
 0.1
-1.4
 2.5
 -0.6
 0.7
5 LOC25501438 FHA domain-containing protein At4g14490 25501438 MTR_8g069135 6.6 7.2
 0.7
0.6
 0.9
 1.5
 0.7
6 LOC11421150 zinc finger CCCH domain-containing protein 5 11421150 MTR_2g005450 6.5 7.8
 -0.5
-0.7
 -0.4
 1.1
 -0.1
7 LOC25493839 pentatricopeptide repeat-containing protein At5g61370, mitochondrial 25493839 MTR_4g108900 6.5 7.2
 4.3
4.9
8 LOC11426900 trihelix transcription factor ASIL2 11426900 MTR_7g081190 6.4 7.2
 0.4
-0.2
 0.5
0.2
 1.6
1.4
 2.4
-0.1
9 LOC25495151 uncharacterized LOC25495151 25495151 MTR_6g005960 6.3 6.9
 0.1
-0.0
 0.8
 -0.2
 -0.2
10 LOC25492693 pentatricopeptide repeat-containing protein At2g15980 25492693 MTR_4g068800 6.3 6.8
 1.1
 2.2
 2.3
 1.3
11 LOC11405190 U1 small nuclear ribonucleoprotein 70 kDa 11405190 MTR_8g077840 6.3 7.0
 -0.2
 -0.0
-1.5
 0.1
 -0.1
12 LOC112418622 CAX-interacting protein 4 112418622 6.2 6.9
 1.0
0.7
 -0.9
 -0.5
 -1.0
13 LOC25488116 chaperone protein dnaJ 49 25488116 MTR_2g436560 6.2 6.7
 0.0
-0.6
 1.0
 0.6
 0.4
0.4
14 LOC25489277 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 25489277 MTR_3g067670 6.0 6.5
 1.0
0.7
 1.2

15 LOC11414324 protein LAZ1 11414324 MTR_3g118470 5.9 6.3
 -0.8
-1.6
 0.7
0.1
 1.8
 -0.2
-0.3
16 LOC11411325 nucleolin 11411325 MTR_8g076100 5.9 6.9
 -0.4
-0.9
 0.4
-0.9
0.8
17 LOC11421625 cytochrome P450 71D11 11421625 MTR_1g035130 5.8 7.1
 2.0
1.6
 -0.0
0.4
0.3
18 LOC25497372 trihelix transcription factor ASIL2 25497372 MTR_6g486270 5.8 6.4
 1.7
0.7
 1.6
1.1
 1.3
 2.8
1.4
19 LOC25500227 septin and tuftelin-interacting protein 1 homolog 1 25500227 MTR_8g010350 5.8 6.3
 -0.5
-0.6
 0.9
-0.4
 0.0
-0.1
 0.1
20 LOC120577635 RNA polymerase I termination factor-like 120577635 5.7 6.3
 -0.1
 1.4
0.7
 -0.1
 1.4
1.3
21 LOC25481896 protein starmaker 25481896 MTR_1g010090 5.7 6.3
 0.4
0.2
 -0.2
 -0.2
 1.2
22 LOC25485827 uncharacterized LOC25485827 25485827 MTR_1g492940 5.7 6.2
 -0.4
-0.6
 0.4
0.0
0.5
-0.1
23 LOC120575720 pentatricopeptide repeat-containing protein At2g36240 120575720 5.7 6.2
 2.1
 -0.8
 1.1
 1.3
24 LOC25482653 pentatricopeptide repeat-containing protein At5g39710 25482653 MTR_1g033960 5.6 6.1
 0.5
 1.8
 1.4
 -0.1
25 LOC25493092 homeobox-DDT domain protein RLT1 25493092 MTR_4g088375 5.6 6.1
 -0.8
-1.0
 0.4
-0.1
 0.5
-0.5
 -0.5
-1.1
26 LOC25482189 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 25482189 MTR_1g023985 5.5 6.0
 0.6
0.0
 -0.1
-0.1
 0.3
 0.6
-0.7
27 LOC25489146 eukaryotic translation initiation factor 5B 25489146 MTR_3g058970 5.5 6.0
 -0.7
-0.8
 -0.0
 0.5
0.2
 0.9
-0.2
28 LOC11416314 SOSS complex subunit B homolog 11416314 MTR_3g010210 5.5 5.8
 1.3
0.5
 -0.3
 2.5
 0.4
29 LOC11428338 protein RDM16 11428338 MTR_1g115920 5.4 5.8
 -0.3
-0.4
 -0.3
-1.6
 0.9
 1.0
-1.3
30 LOC11444480 pentatricopeptide repeat-containing protein At4g20740 11444480 MTR_3g023180 5.4 6.2
 0.9
0.2
 0.7
 4.8
 2.2
31 LOC11425876 protein suppressor of white apricot 11425876 MTR_5g093560 5.4 5.7
 -0.7
-1.4
 -0.7
 0.0
 -0.9
32 LOC11434036 nuclear poly(A) polymerase 4-like 11434036 5.3 5.7
 0.1
-0.4
 -0.8
-1.8
 -1.1
-1.2
 -0.8
-0.9
33 LOC11418819 DEAD-box ATP-dependent RNA helicase 42 11418819 MTR_2g007000 5.3 5.8
 -0.7
-1.0
 -1.3
-1.5
 1.0
 -0.1
34 LOC11445374 YLP motif-containing protein 1 11445374 MTR_4g107890 5.3 5.7
 0.1
-0.2
 -1.3
 2.3
 0.3
35 LOC25494333 DEAD-box ATP-dependent RNA helicase 21 25494333 MTR_4g134170 5.3 5.7
 0.1
-0.2
 1.8
0.1
 0.7
 -0.0
-0.2
36 LOC25500833 NKAP-like protein 25500833 MTR_8g028640 5.3 5.8
 0.0
-0.3
 0.7
-0.0
0.5
37 LOC11421963 SART-1 family protein DOT2 11421963 MTR_1g083910 5.2 5.8
 0.7
0.0
 -0.3
 -0.8
 -0.4
38 LOC11441271 homeobox-DDT domain protein RLT1 11441271 MTR_2g014490 5.2 5.9
 -0.8
-1.0
 0.4
-0.1
 0.5
-0.5
 -0.5
-1.1
39 LOC11420479 N6-adenosine-methyltransferase non-catalytic subunit MTB 11420479 MTR_1g100210 5.2 5.8
 1.4
0.5
 1.0
0.4
 4.4
 0.0
-0.2
40 LOC112419799 myb-like protein X 112419799 5.2 5.6
 0.1
-0.4
 -0.2
-0.8
 -0.2
 -0.0
41 LOC120579462 uncharacterized LOC120579462 120579462 5.2 5.6
 0.9
0.2
 1.4
0.6
 2.3
1.5
 0.4
0.2
42 LOC11418639 uncharacterized LOC11418639 11418639 MTR_1g116330 5.2 5.7
 0.1
 0.6
-0.3
 -0.6
 0.5
0.2
43 LOC11429943 pentatricopeptide repeat-containing protein At5g01110 11429943 MTR_5g090210 5.2 5.6
 -0.5
 -0.2
 2.0
 0.6
44 LOC11428554 protein MOS2 11428554 5.2 5.5
 1.5
0.7
 1.7
0.7
 1.6
0.6
 0.3
45 LOC11429051 serine/threonine-protein kinase WNK8-like 11429051 5.2 6.0
 0.3
-0.7
 0.1
-0.9
 0.8
0.2
 0.3
0.2
46 LOC25489149 uncharacterized PE-PGRS family protein PE_PGRS54 25489149 MTR_3g059000 5.2 5.6
 0.3
0.1
 1.4
-0.3
 2.3
1.5
 -0.6
-0.8
47 LOC25493794 DDT domain-containing protein DDR4 25493794 MTR_4g107390 5.1 5.6
 -0.5
-0.8
 0.9
0.8
 1.4
 0.7
48 LOC25495490 E3 ubiquitin-protein ligase CIP8 25495490 MTR_6g016350 5.1 5.5
 0.3
0.1
 1.6
0.2
 -0.2
-0.3
 -0.4
-0.8
49 LOC25501569 uncharacterized LOC25501569 25501569 MTR_8g071270 5.1 5.4
 0.5
 0.4
 -0.0
 0.4
50 LOC11415940 SNW/SKI-interacting protein 11415940 MTR_2g030450 5.1 5.4
 0.8
0.2
 1.1
-0.0
 0.1
 -0.2
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