Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4340716   autophagy-related protein 2 
 osa-r.5   4340716   autophagy-related protein 2 
 osa-m.8   4340716   autophagy-related protein 2 
 ath-u.4   ATG2   autophagy 2 
 gma-u.4   100805552   autophagy-related protein 2 
 gma-u.4   100802641   autophagy-related protein 2 
 sly-u.4   101260283   autophagy-related protein 2 
 ppo-u.4   18097793   autophagy-related protein 2 
 ppo-u.4   7490030   autophagy-related protein 2 
 mtr-u.4   11441425   autophagy-related protein 2 

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Top 50 coexpressed genes to 4340716 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4120   Ubiquitin mediated proteolysis  3 121 2.67
 osa4136   Autophagy - other  2 40 2.49
 osa71   Fatty acid degradation  1 53 -
 osa3040   Spliceosome  2 196 -
 osa4075   Plant hormone signal transduction  2 262 -

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osa:LOC4340716 (autophagy-related protein 2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4340716
osa-r.5
for
4340716
osa-m.8
for
4340716
ath-u.4
for
ATG2
gma-u.4
for
100805552
gma-u.4
for
100802641
sly-u.4
for
101260283
ppo-u.4
for
18097793
ppo-u.4
for
7490030
mtr-u.4
for
11441425
1 LOC4336323 F-box/LRR-repeat protein 14 4336323 Os04g0503500 6.5 7.2
 5.7
 3.9
 1.3
0.3
 1.5
1.2
 2.0
-0.0
 3.6
 3.0
 2.4
1.4
2 LOC4328044 uncharacterized LOC4328044 4328044 Os02g0110700 6.4 6.4
 6.3
 5.3
 5.6
4.7
 6.1
5.0
 6.7
-0.1
 4.3
1.9
 3.8
1.9
 4.4
1.6
3 LOC4344267 probable acyl-CoA dehydrogenase IBR3 4344267 Os07g0675000 6.0 7.1
 4.8
 1.7
 1.1
0.7
 1.0
0.3
 3.4
2.2
 2.6
1.5
 2.3
0.9
 2.8
4 LOC4346348 mediator of RNA polymerase II transcription subunit 15a 4346348 Os08g0564800 5.9 5.3
 6.6
 4.7
 7.3
5.9
 5.2
4.7
 6.0
 4.6
3.9
 4.7
3.4
 5.4
3.1
5 LOC4328058 ATP-dependent helicase BRM 4328058 Os02g0114033 5.9 5.6
 6.2
 4.9
 6.2
5.7
 5.6
5.2
 5.7
 5.2
4.3
 3.9
3.3
 7.7
6.8
6 LOC4333036 uncharacterized LOC4333036 4333036 Os03g0395600 5.8 6.5
 5.1
 4.0
 6.0
5.6
 6.4
6.4
 7.6
 5.2
3.7
 4.9
4.1
 5.1
7 LOC4330904 uncharacterized LOC4330904 4330904 Os02g0777100 5.7 7.2
 4.1
 3.2
 5.1
3.6
 4.8
3.4
 4.8
 5.0
 4.1
 3.8
8 LOC4346616 mediator of RNA polymerase II transcription subunit 14 4346616 Os09g0281900 5.6 5.8
 5.5
 5.6
 6.4
5.6
 7.4
6.6
 5.7
 4.6
4.4
 4.4
3.4
 6.6
9 LOC4349840 uncharacterized LOC4349840 4349840 Os11g0159000 5.6 6.1
 5.1
 7.0
 4.2
3.2
 3.9
3.7
 4.8
 5.5
3.4
 5.2
4.1
 6.8
10 LOC4331010 serine/threonine-protein kinase VPS15 4331010 Os02g0796700 5.5 6.5
 4.6
 6.3
 6.1
5.1
 6.2
5.8
 7.3
 4.7
 4.5
 5.4
11 LOC4340270 uncharacterized WD repeat-containing protein C2A9.03 4340270 Os06g0171900 5.5 5.1
 5.9
1.1
0.4
 0.3
-0.2
 1.0
0.9
 2.2
0.9
 1.6
0.6
 0.6
12 LOC4339037 E3 ubiquitin-protein ligase UPL4 4339037 Os05g0464001 5.5 6.5
 4.4
 6.3
 6.1
5.0
 5.3
5.0
 4.6
 7.1
3.7
 5.1
4.4
 6.2
13 LOC112938316 dentin sialophosphoprotein-like 112938316 Os03g0187100 5.3 6.8
3.8
 6.0
4.7
 5.3
5.2
 3.9
 3.3
 3.3
 3.7
1.6
14 LOC4325212 E3 ubiquitin-protein ligase PRT6 4325212 Os01g0148050 5.3 5.0
 5.5
 8.7
 7.4
5.3
 7.7
6.0
 7.8
5.8
 8.2
 5.6
 9.1
15 LOC4343336 transcription factor GTE11 4343336 Os07g0507700 5.3 4.9
 5.6
 -1.3
 0.3
-0.0
 0.1
-0.6
 1.2
 1.5
1.3
 0.9
0.7
 2.0
16 LOC4342674 splicing factor 3B subunit 3 4342674 Os07g0203800 5.2 5.9
 4.5
 5.7
 7.8
5.0
 7.0
6.1
 5.2
 5.0
 4.7
 8.1
17 LOC4349486 dnaJ homolog subfamily C GRV2 4349486 Os10g0575200 5.2 5.8
 4.5
 6.4
 8.4
6.2
 8.0
6.1
 7.3
 4.7
 4.3
 7.8
18 LOC4348996 KH domain-containing protein HEN4 4348996 Os10g0495000 5.2 5.9
 4.5


3.8
 1.7
 0.1
19 LOC9268973 CHD3-type chromatin-remodeling factor PICKLE 9268973 Os06g0183800 5.2 6.0
 4.3
 2.2
 4.8
4.7
 4.2
3.9
 3.8
3.1
 4.2
3.4
 4.6
2.4
 3.9
20 LOC4328503 autophagy-related protein 11 4328503 Os02g0179800 5.1 5.5
 4.8
 7.4
 6.3
5.4
 7.5
5.7
 4.8
 4.3
4.1
 3.4
2.4
 6.4
21 LOC4344116 mediator of RNA polymerase II transcription subunit 12 4344116 Os07g0648300 5.1 5.6
 4.6
 8.0
 10.3
9.7
 10.4
9.6
 6.6
 5.6
4.5
 6.3
2.5
 8.0
7.9
22 LOC4335431 uncharacterized LOC4335431 4335431 Os04g0306800 5.1 4.7
 5.4
 -0.3


0.3
 1.4
23 LOC4346059 pumilio homolog 5 4346059 Os08g0519800 5.0 6.7
 3.4
 3.9
3.4
 3.3
3.2
 3.4
3.2
 4.6
 5.7
4.2
 3.7
3.3
 5.4
24 LOC4351066 uncharacterized LOC4351066 4351066 Os11g0661400 5.0 5.6
 4.5
 5.2
5.1
 8.0
7.8
 6.8
6.2
 7.6
4.9
 3.5
3.1
 3.8
3.0
 5.4
5.0
25 LOC4340647 inactive poly [ADP-ribose] polymerase RCD1 4340647 Os06g0248400 5.0 5.8
 4.2






26 LOC4327594 uncharacterized LOC4327594 4327594 Os01g0814000 5.0 5.6
 4.4
 3.4
 4.6
3.9
 4.4
3.7
 1.8
 3.8
 3.4
 2.4
27 LOC4352108 E3 ubiquitin-protein ligase UPL2 4352108 Os12g0428600 4.9 5.5
 4.2
8.1
7.6
 8.6
7.6
 7.8
 7.5
 6.4
 10.7
9.9
28 LOC4327816 E3 ubiquitin-protein ligase listerin 4327816 Os01g0977600 4.9 3.7
 6.0
 5.0
 7.4
 6.8
 4.6
 4.8
 4.0
 5.6
29 LOC4339999 spastin 4339999 Os06g0130000 4.8 3.5
 6.2
 2.2
 2.4
0.6
 2.3
1.1
 4.0
 1.1
 1.9
 1.4
30 LOC9271913 probable histidine kinase 3 9271913 OSNPB_010923700 4.8 4.6
 5.1
 5.3
 2.8
2.2
 4.1
3.6
 3.2
 5.3
3.6
 4.6
3.4
 5.3
3.4
31 LOC4350962 E3 ubiquitin-protein ligase At3g02290 4350962 Os11g0629300 4.8 5.5
 4.1
 3.4
2.6
 1.1
0.9
 2.2
1.5
 2.0
1.4
 2.0
1.3
 2.3
1.3
 1.2
0.3
32 LOC4352548 protein MODIFIER OF SNC1 1 4352548 Os12g0566200 4.8 5.0
 4.6
 4.4
 7.1
6.8
 6.1
5.6
 5.4
 3.9
3.8
 5.1
3.5
 6.3
3.1
33 LOC4331160 pumilio homolog 1 4331160 Os02g0819300 4.8 5.9
 3.6
 2.8
2.3
 5.4
4.7
 5.4
4.5
 4.1
2.6
 4.6
3.8
 3.1
3.0
 4.9
3.3
34 TPR3 protein TPR3-like 4332285 Os03g0254700 4.8 4.5
 5.0
 3.8
3.2
 5.0
4.6
 4.7
3.9
 4.4
2.4
 4.3
3.0
 3.7
3.3
 4.6
4.5
35 LOC4325176 uncharacterized LOC4325176 4325176 Os01g0273500 4.7 5.2
 4.2
 4.3
1.5
 4.5
3.8
 5.0
4.1
 5.5
4.8
 3.9
2.8
 3.8
3.5
 5.4
4.0
36 LOC4334354 cullin-4 4334354 Os03g0786800 4.7 5.2
 4.3
 2.7
 4.1
1.8
 3.1
1.5
 4.5
0.5
 2.7
2.4
 2.0
1.6
 4.1
37 LOC4339268 TNF receptor-associated factor homolog 1a 4339268 Os05g0508700 4.6 4.4
 4.9






38 LOC4337571 uncharacterized LOC4337571 4337571 Os05g0107300 4.6 5.7
 3.6
 5.6
 4.9
4.2
 4.1
3.8
 3.0
 5.6
4.9
 5.2
4.2
 4.0
3.1
39 LOC4343362 uncharacterized LOC4343362 4343362 Os07g0511900 4.5 4.5
 4.5






40 LOC4331696 serine/threonine-protein kinase EDR1 4331696 Os03g0160100 4.5 4.5
 4.6
 5.5
 2.9
1.9
 2.8
2.4
 4.9
 3.9
1.5
 4.1
1.6
 5.4
41 LOC4331008 two-component response regulator ORR23-like 4331008 OSNPB_020796500 4.5 5.2
 3.9
 0.4
0.1
 2.3
1.8
 2.2
2.0
 2.1
-0.3
 2.0
1.6
 1.8
1.1
 2.4
2.3
42 LOC9267891 structural maintenance of chromosomes protein 6B 9267891 Os09g0121050 4.5 6.1
 2.9
 1.2
0.1
 4.0
 3.5
 1.2
 1.0
 1.0
 2.7
1.6
43 LOC9272729 CCR4-NOT transcription complex subunit 1 9272729 Os10g0556700 4.5 5.3
 3.8
 6.2
 8.2
6.9
 7.0
6.5
 7.6
 5.6
5.5
 5.5
4.5
 6.8
44 LOC4340248 pre-mRNA-processing-splicing factor 8A 4340248 Os06g0167000 4.5 4.4
 4.6
 4.6
1.2
 6.4
5.6
 6.6
5.3
 4.1
 4.1
 2.7
 5.8
5.7
45 LOC4326524 probable feruloyl esterase A 4326524 Os01g0936200 4.5 4.9
 4.1
 2.5
2.3
 3.2
1.9
 1.7
1.3
 2.8
1.6
 -0.1
-0.2
 1.0
0.4
 1.9
46 LOC4332044 hornerin 4332044 Os03g0213300 4.5 4.4
 4.5
 4.3
3.9
 7.8
7.5
 9.9
9.4
 6.3
5.8
 6.7
6.1
 6.4
6.0
 8.5
7.0
47 CWZF7 Cysteine-tryptophan domain-containing zinc finger protein 7 4344236 Os07g0669800 4.5 5.6
 3.3
 6.1
 8.5
8.1
 9.8
8.5
 5.4
5.3
 5.8
4.8
 5.2
4.3
 8.4
4.7
48 LOC4337365 uncharacterized LOC4337365 4337365 Os04g0672200 4.4 4.9
 4.0






49 LOC4326133 paired amphipathic helix protein Sin3-like 3 4326133 Os01g0109700 4.4 4.2
 4.6
 6.3
5.2
 8.8
7.3
 7.4
7.1
 6.0
5.0
 5.5
5.3
 4.5
3.7
 8.5
8.2
50 LOC4343292 regulator of nonsense transcripts 1 homolog 4343292 Os07g0495900 4.4 4.5
 4.3
 2.9
 8.0
6.9
 6.7
5.2
 3.7
3.5
 4.5
4.0
 3.7
3.1
 4.8
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