Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4344874   nuclear transcription factor Y subunit A-4 
 osa-r.5   4344874   nuclear transcription factor Y subunit A-4 
 osa-m.8   4344874   nuclear transcription factor Y subunit A-4 
 osa-u.4   4352778   nuclear transcription factor Y subunit A-7 
 osa-u.4   4333806   nuclear transcription factor Y subunit A-9 
 ath-u.4   NF-YA4   nuclear factor Y, subunit A4 
 ath-u.4   NF-YA7   nuclear factor Y, subunit A7 
 gma-u.4   NF-YA08   nuclear transcription factor Y subunit A-8 
 gma-u.4   NF-YA11   nuclear transcription factor Y subunit A-11 
 gma-u.4   NF-YA04   nuclear transcription factor Y subunit A-4 
 sly-u.4   101260988   nuclear transcription factor Y subunit A-7 
 sly-u.4   101247462   nuclear transcription factor Y subunit A-9 
 ppo-u.4   18103293   nuclear transcription factor Y subunit A-7 
 ppo-u.4   7467333   nuclear transcription factor Y subunit A-7 
 mtr-u.4   25501058   nuclear transcription factor Y subunit A-4 
 mtr-u.4   11413865   nuclear transcription factor Y subunit A-7 

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Top 50 coexpressed genes to 4344874 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4141   Protein processing in endoplasmic reticulum  9 191 9.66
 osa3040   Spliceosome  5 177 4.46
 osa3018   RNA degradation  2 112 -
 osa480   Glutathione metabolism  2 114 -
 osa4144   Endocytosis  2 163 -

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osa:LOC4344874 (nuclear transcription factor Y subunit A-4) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4344874
osa-r.5
for
4344874
osa-m.8
for
4344874
osa-u.4
for
4352778
osa-u.4
for
4333806
ath-u.4
for
NF-YA4
ath-u.4
for
NF-YA7
gma-u.4
for
NF-YA08
gma-u.4
for
NF-YA11
gma-u.4
for
NF-YA04
sly-u.4
for
101260988
sly-u.4
for
101247462
ppo-u.4
for
18103293
ppo-u.4
for
7467333
mtr-u.4
for
25501058
mtr-u.4
for
11413865
1 LOC4345952 uncharacterized LOC4345952 4345952 Os08g0500800 12.8 12.7
 12.9
 0.3
 0.4
 -0.8
 -0.5
 0.5
 -1.1
 1.3
 1.3
 0.2
 1.3
 2.0
 1.0
 2.1
2 LOC4347637 heat stress transcription factor B-2c-like 4347637 OSNPB_090526600 11.3 10.4
 12.1
 0.7
0.4
 0.4
-0.3
 0.3
0.1
 1.1
0.8
 1.3
0.8
 1.7
1.6
 2.1
1.9
 -0.1
-0.2
 1.4
1.2
 1.2
0.5
 2.4
0.9
 1.8
0.6
 0.4
0.1
3 LOC4326364 dnaJ homolog subfamily B member 1 4326364 Os01g0239100 11.0 9.8
 12.2
 0.9
0.9
 0.1
-0.0
 1.1
0.1
 2.0
1.1
 0.5
0.5
 1.4
1.2
 2.1
1.6
 0.7
0.2
 0.0
-0.1
 1.4
0.9
 1.4
0.8
 0.3
0.2
 2.2
1.3
4 LOC4330134 hsp70-Hsp90 organizing protein 4330134 Os02g0644100 10.9 10.2
 11.5
 1.4
0.3
 0.5
0.1
 -0.5
-1.1
 0.7
-0.3
 0.6
-0.6
 1.5
1.5
 1.0
0.7
 -1.1
 0.0
 -0.1
-0.7
 -0.0
-1.1
 -1.3
 0.6
5 LOC4332350 serine/arginine-rich splicing factor SR45a 4332350 Os03g0265600 10.2 9.6
 10.8
 1.6
1.3
 2.8
1.9
 1.7
0.6
 0.6
-0.5
 3.5
1.8
 0.8
0.7
 2.9
2.2
 0.6
0.5
 1.8
1.5
 1.8
1.7
 1.5
1.5
 0.8
0.2
 1.9
1.3
6 LOC4328515 chaperone protein ClpB3, mitochondrial-like 4328515 OSNPB_020181900 10.1 8.5
 11.7
 1.3
0.5
 0.9
-0.5
 2.4
-0.2
 1.3
1.3
 1.8
1.7
 0.4
-0.1
 0.8
0.5
 -1.0
 1.1
 2.9
1.8
 1.9
0.6
 -0.7
-0.7
 3.1
2.0
7 LOC4339609 dnaJ homolog subfamily B member 4 4339609 Os05g0562300 9.9 9.7
 10.2
 0.9
0.9
 0.1
-0.0
 1.1
0.1
 2.0
1.1
 0.5
0.5
 1.4
1.2
 2.1
1.6
 0.7
0.2
 0.0
-0.1
 1.4
0.9
 1.4
0.8
 0.3
0.2
 2.2
1.3
8 LOC4325302 calcyclin-binding protein 4325302 Os01g0757500 9.8 8.4
 11.2
 -0.1
 0.0
 -0.4
 0.6
 0.1
-0.6
 -0.0
-0.4
 1.5
0.1
 -0.2
 -1.1
 0.9
 -1.0
 -0.7
 2.6
9 LOC4328250 uncharacterized LOC4328250 4328250 Os02g0139100 9.7 9.0
 10.4
 -0.0
-0.3
 -0.4
-0.5
 1.1
 0.8
 2.2
0.7
 0.9
-0.2
 3.8
0.2

0.2
-0.1
 0.9
-0.9
 0.0
 0.3
10 LOC4345951 heat shock protein 81-1 4345951 OSNPB_080500700 9.7 10.0
 9.4
 0.3
0.2
 0.9
0.3
 -0.3
-0.3
 1.0
0.0
 -0.4
-0.5
 1.3
1.1
 0.3
0.1
 0.2
-0.5
 0.1
0.1
 1.5
0.5
 0.4
-0.5
 0.1
-2.1
 0.4
-0.0
11 LOC4327388 probable mediator of RNA polymerase II transcription subunit 37c 4327388 Os01g0840100 9.7 9.4
 9.9
 1.5
0.8
 1.3
1.1
 0.7
0.7
 1.4
0.2
 0.3
0.2
 1.4
1.3
 0.5
0.3
 0.6
-0.5
 0.2
-0.2
 1.4
1.1
 1.5
0.9
 0.9
0.8
 1.3
0.5
12 LOC4329388 70 kDa peptidyl-prolyl isomerase 4329388 Os02g0491400 9.5 10.3
 8.7
 0.8
0.3
 0.9
-0.3
 -0.6
-1.2
 0.4
-0.6
 0.9
-0.1
 1.3
1.0
 0.8
0.6
 -0.7
-0.8
 0.6
-0.6
 1.1
0.0
 -0.2
-1.4
 -0.0
-0.6
 1.1
0.7
13 LOC9268567 splicing factor U2af small subunit A-like 9268567 OSNPB_090491756 9.5 9.3
 9.7
 1.4
0.6
 1.6
1.1
 -0.1
-0.3
 0.9
0.4
 0.5
-0.0
 0.3
0.2
 1.1
1.0
 0.5
0.4
 -0.0
-0.8
 1.6
0.8
 0.3
-0.7
 0.2
-0.2
 1.1
0.9
14 LOC4339195 zinc finger protein 830 4339195 Os05g0495100 9.3 8.4
 10.1
 0.5
 0.3
 1.2
 1.0
 1.1
0.8
 -0.5
-0.9
 2.0
1.1
 1.1
 -0.1
 0.1
 -0.3
 0.7
 2.3
15 LOC4332515 dnaJ protein ERDJ3A-like 4332515 OSNPB_030293000 9.2 9.5
 8.8
 1.5
 0.1
 -0.7
 0.4
 -0.4
-1.7
 0.2
0.0
 1.8
1.3
 -0.7
 0.1
 1.0
 -0.6
 0.0
 -0.5
16 LOC4332979 co-chaperone protein p23-1 4332979 Os03g0381300 9.0 9.0
 9.1
 1.5
0.0
 -0.1
-0.4
 -0.2
 -0.7
 0.7
0.3
 1.3
1.0
 -0.5
-0.7
 0.9
-0.7
 0.7
-0.1
 1.0
-0.6
 -0.8
-1.6
 0.6
0.4
 1.0
0.2
17 LOC4330786 24.1 kDa heat shock protein, mitochondrial-like 4330786 OSNPB_020758000 9.0 7.9
 10.1
 0.3
 -0.5
 -0.9
-1.0
 0.3
-0.1


-0.4
 -0.8
 0.4
-0.1
 -0.3
-0.8
 -0.4
 1.1
18 LOC4346090 70 kDa peptidyl-prolyl isomerase 4346090 Os08g0525600 8.9 9.7
 8.2
 0.8
0.3
 0.9
-0.3
 -0.6
-1.2
 0.4
-0.6
 0.9
-0.1
 1.3
1.0
 0.8
0.6
 -0.7
-0.8
 0.6
-0.6
 1.1
0.0
 -0.2
-1.4
 -0.0
-0.6
 1.1
0.7
19 LOC4343980 developmentally-regulated G-protein 3 4343980 Os07g0627800 8.5 7.7
 9.3
 0.5
 0.5
 -0.1
 0.9
 0.4
0.2
 0.8
0.4
 2.7
2.6
 0.5
 -0.5
 0.7
 -0.6
 -0.6
 2.1
20 LOC4325355 heat shock 70 kDa protein 15 4325355 Os01g0180800 8.1 8.0
 8.2
 -0.9
-1.8
 -0.6
-0.7
 -0.9
 -1.9
 0.6
-0.4
 0.9
0.6
 0.1
-0.4
 -0.2
-0.5
 -0.5
-1.0
 0.4
-0.6
 -0.3
-0.5
 -1.6
-1.7
 0.2
-0.3
21 LOC4326682 protein SGT1 homolog 4326682 OSNPB_010624500 8.1 9.7
 6.4
 0.2
 0.3
 1.1
0.2
 1.7
-0.7
 0.4
0.2
 1.0
0.6
 1.7
1.3
 -0.8
 0.4
 1.5
-0.5
 1.3
1.0
 0.2
-0.3
 1.9
1.8
22 LOC4330022 RNA-binding protein 42 4330022 Os02g0622500 8.1 6.8
 9.4
 2.2
0.8
 1.7
0.7
 0.6
 -0.3
 0.9
0.4
 0.8
0.3
 2.8
2.6
 1.5
1.2
 1.1
0.5
 1.2
-0.9
 0.2
-0.3
 0.0
 2.7
23 LOC4331379 heat shock 70 kDa protein, mitochondrial 4331379 Os03g0113700 8.0 8.5
 7.5
 -0.6
-0.6
 0.2
-0.9
 0.1
-0.6
 0.9
-0.8
 -1.2
-1.3
 0.8
0.5
 0.5
0.5
 0.6
-0.2
 -0.9
-1.2
 0.1
-1.7
 -1.1
-2.2
 -1.4
-2.3
 -0.7
-1.3
24 LOC4345780 activator of 90 kDa heat shock protein ATPase homolog 1 4345780 Os08g0464000 8.0 6.6
 9.4
 0.6
 -0.3
 -0.4
 0.4
 -0.5
-0.7
 0.7
0.2
 0.4
0.2
 -0.4
 -1.2
 -0.5
-1.3
 -0.7
-1.9
 -1.3
-1.9
 0.4
-0.4
25 LOC4339012 probable mediator of RNA polymerase II transcription subunit 37c 4339012 Os05g0460000 8.0 7.7
 8.2
 1.5
0.8
 1.3
1.1
 0.7
0.7
 1.4
0.2
 0.3
0.2
 1.4
1.3
 0.5
0.3
 0.6
-0.5
 0.2
-0.2
 1.4
1.1
 1.5
0.9
 0.9
0.8
 1.3
0.5
26 LOC4336701 heat stress transcription factor B-2a-like 4336701 OSNPB_040568700 7.7 5.3
 10.2
 0.7
0.4
 0.4
-0.3
 0.3
0.1
 1.1
0.8
 1.3
0.8
 1.7
1.6
 2.1
1.9
 -0.1
-0.2
 1.4
1.2
 1.2
0.5
 2.4
0.9
 1.8
0.6
 0.4
0.1
27 LOC4339933 chaperone protein dnaJ GFA2, mitochondrial 4339933 Os06g0116800 7.7 7.2
 8.3
 1.0
0.8
 1.5
-0.2
 0.7
 1.6
 2.6
2.5
 0.4
0.2
 3.1
2.0
 0.3
 -0.2
 0.7
0.0
 -0.3
-0.9
 0.1
-0.2
 1.4
0.1
28 LOC4336279 splicing factor U2AF-associated protein 2 4336279 Os04g0496400 7.7 6.0
 9.4
 1.2
 1.3
 -0.1
 1.2
 0.6
0.6
 0.7
-0.3
 1.2
-0.3
 0.7
 0.7
 0.2
-0.7
 0.4
-0.6
 0.5
 1.9
29 LOC4351575 calcineurin B-like protein 6 4351575 OSNPB_120162400 7.7 6.8
 8.6
 2.1
1.0
 0.8
0.7
 0.4
-0.2
 0.1
-0.9
 1.1
0.7
 1.4
0.8
 1.2
1.0
 2.4
0.7
 1.1
0.5
 0.7
0.5
 0.7
0.5
 0.6
-0.4
 2.0
0.9
30 LOC4327708 GTP-binding protein SAR1A 4327708 Os01g0254000 7.6 7.5
 7.8
 1.8
0.4
 0.4
0.2
 2.7
0.8
 2.4
0.4
 2.2
1.3
 1.7
1.2
 0.5
0.5
 2.5
1.5
 0.8
-0.1
 1.5
1.4
 1.9
1.4
 -0.0
-0.4
 2.1
1.1
31 LOC4340007 protein DECREASED SIZE EXCLUSION LIMIT 1 4340007 Os06g0131100 7.5 7.0
 8.0
 1.2
 1.4
 0.8
 1.3
 -0.4
 0.3
 1.3
 -1.1
 0.7
 0.3
 -1.7
 1.1
 0.7
32 LOC4336427 uncharacterized LOC4336427 4336427 Os04g0521700 7.5 5.6
 9.4
 0.1
 -0.2










33 LOC4341866 protein HEAT-STRESS-ASSOCIATED 32 4341866 Os06g0682900 7.5 8.0
 6.9
 1.0
 0.6
 -0.7
 1.2
 0.5
 0.9
 0.5
 -0.4
 1.4
 1.5
 -0.4
 -0.6
 0.1
34 LOC4340661 16.0 kDa heat shock protein, peroxisomal-like 4340661 OSNPB_060253100 7.4 6.2
 8.7
 0.8
 -0.1
 0.1
 2.3
 0.8
-0.1
 0.6
-0.1
 1.4
0.3
 0.3
 -0.3
 2.6
 0.4

35 LOC4338013 derlin-1-like 4338013 OSNPB_050187800 7.4 7.8
 7.0
 1.3
 0.7
 0.2
 0.8
 0.0
-0.7
 0.0
-0.5
 2.3
1.7
 -0.9
 -0.6
 -0.2
 -0.4
 -0.3
 0.4
36 LOC4331510 ubiquitin domain-containing protein DSK2a 4331510 Os03g0131300 7.3 7.6
 7.0
 0.7
0.3
 1.0
-0.4
 0.2
-0.4
 0.2
-0.7
 -0.8
-1.4
 -0.4
-0.6
 1.0
0.6
 -0.4
-0.5
 0.7
0.2
 0.4
-0.1
 1.8
0.3
 1.2
0.1
 1.3
0.5
37 LOC4351547 mRNA-decapping enzyme-like protein 4351547 Os12g0156400 7.2 8.1
 6.3
 0.6
0.5
 1.0
0.6
 0.3
 -0.3
 -0.0
-1.0
 -0.8
-1.3
 1.8
1.3
 0.5
0.4
 0.0
-0.8
 1.3
0.0
 2.3
1.4
 0.7
 2.0
38 LOC4334359 dnaJ protein homolog 4334359 Os03g0787300 7.1 6.4
 7.9
 1.0
0.6
 1.9
1.0
 0.8
0.5
 0.2
0.1
 2.1
1.3
 0.8
0.7
 3.3
3.0
 0.9
0.7
 1.9
1.8
 0.8
0.7
 0.5
0.1
 2.9
2.1
 1.6
1.3
39 LOC4344397 L-ascorbate peroxidase 2, cytosolic-like 4344397 OSNPB_070694700 7.1 6.8
 7.3
 1.0
-0.9
 0.7
0.1
 0.5
-0.9
 0.5
0.0
 0.0
-0.4
 0.7
0.3
 -0.4
-0.8
 0.0
-1.0
 0.9
0.6
 2.1
1.4
 0.9
0.3
 -0.7
 1.2
40 LOC4348629 histone acetyltransferase GCN5-like 4348629 OSNPB_100415900 7.0 5.7
 8.4
 0.7
 1.1
 -0.1
 1.3
 -0.7
-1.6
 0.1
0.0
 1.3
0.1
 0.4
 0.0
 0.5
-0.6
 1.4
0.4
 1.1
0.5
 2.4
1.4
41 LOC4338058 casein kinase 1-like protein HD16 4338058 Os05g0200500 7.0 6.6
 7.3
 1.5
0.9
 1.7
1.2
 0.3
-0.1
 -0.1
-0.9
 0.6
-0.4
 0.4
0.2
 2.0
1.9
 0.5
0.4
 1.7
1.3
 1.2
0.7
 0.9
0.8
 1.3
0.0
 3.0
1.8
42 LOC4336524 hsp70-Hsp90 organizing protein 4336524 Os04g0538000 7.0 5.9
 8.1
 1.4
0.3
 0.5
0.1
 -0.5
-1.1
 0.7
-0.3
 0.6
-0.6
 1.5
1.5
 1.0
0.7
 -1.1
 0.0
 -0.1
-0.7
 -0.0
-1.1
 -1.3
 0.6
43 LOC4328268 uncharacterized LOC4328268 4328268 Os02g0141500 6.9 5.0
 8.8
 1.9
 0.3
 -0.0
 0.2
 0.8
0.8
 1.9
1.3
 2.5
1.2
 1.2
 0.2
 2.2
2.0
 1.4
0.7
 1.4
 2.6
44 LOC4328940 ubiquitin-conjugating enzyme E2 5B-like 4328940 OSNPB_020261100 6.9 6.8
 6.9
 2.5
1.7
 1.2
0.8
 0.7
0.4
 1.8
1.2
 2.8
2.0
 1.9
1.4
 3.1
2.7
 2.6
1.3
 1.7
1.6
 2.7
1.4
 1.9
1.8
 2.5
2.0
 2.9
2.7
45 LOC4333870 microsomal glutathione S-transferase 3 4333870 Os03g0709000 6.9 6.7
 7.0
 -0.0
 -0.3
 -0.1
 0.9


-0.8
 1.8
 1.1
-0.8
 -0.2
-1.4
 0.1
 3.3
46 LOC4336740 polyprenol reductase 1-like 4336740 OSNPB_040576800 6.9 5.8
 7.9
 1.2
 1.4
 0.0
 0.1
 0.0
 0.1
 0.1
 0.2
 1.3
 0.1
 0.4
 0.1
 0.0
47 LOC4339434 protein MLN51 homolog 4339434 Os05g0534600 6.9 5.4
 8.3
 0.2
 -0.2










48 LOC4344009 serine/arginine-rich SC35-like splicing factor SCL33 4344009 Os07g0633200 6.7 8.5
 4.9
 1.6
0.8
 1.9
0.9
 2.2
0.8
 2.1
1.2
 1.2
1.1
 1.1
-0.7
 4.5
2.5
 0.8
 0.8
 2.2
2.0
 1.1
0.6
 0.8
0.4
 1.4
1.0
49 LOC4349997 B3 domain-containing protein Os11g0197600-like 4349997 OSNPB_110197600 6.7 6.0
 7.4
 -0.2
 0.7










50 LOC4338552 serine/arginine-rich-splicing factor SR34 4338552 Os05g0364600 6.7 5.9
 7.4
 1.4
1.1
 2.1
1.1
 1.8
0.9
 1.4
-0.1
 2.3
2.0
 0.8
0.5
 3.9
2.5
 -0.0
 3.0
 1.8
0.8
 0.7
0.0
 1.8
1.5
 0.9
0.4
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