Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4345884   serine/arginine-rich splicing factor SC35 
 osa-r.5   4345884   serine/arginine-rich splicing factor SC35 
 osa-m.8   4345884   serine/arginine-rich splicing factor SC35 
 osa-u.4   4343955   serine/arginine-rich splicing factor SC35 
 ath-u.4   SC35   serine/arginine-rich splicing factor-like protein, putative 
 gma-u.4   100778928   serine/arginine-rich splicing factor SC35 
 gma-u.4   100804370   serine/arginine-rich splicing factor SC35-like protein 
 sly-u.4   101257217   serine/arginine-rich splicing factor SC35 
 sly-u.4   101251771   serine/arginine-rich splicing factor SC35 
 ppo-u.4   112323213   serine/arginine-rich splicing factor SC35-like 
 ppo-u.4   18096633   serine/arginine-rich splicing factor SC35 
 ppo-u.4   7486602   serine/arginine-rich splicing factor SC35 
 mtr-u.4   25493273   serine/arginine-rich splicing factor SC35 
 mtr-u.4   11409922   serine/arginine-rich splicing factor SC35 

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Top 50 coexpressed genes to 4345884 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  5 176 4.47
 osa3008   Ribosome biogenesis in eukaryotes  2 90 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa3015   mRNA surveillance pathway  2 115 -
 osa3010   Ribosome  3 353 -

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osa:LOC4345884 (serine/arginine-rich splicing factor SC35) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4345884
osa-r.5
for
4345884
osa-m.8
for
4345884
osa-u.4
for
4343955
ath-u.4
for
SC35
gma-u.4
for
100778928
gma-u.4
for
100804370
sly-u.4
for
101257217
sly-u.4
for
101251771
ppo-u.4
for
112323213
ppo-u.4
for
18096633
ppo-u.4
for
7486602
mtr-u.4
for
25493273
mtr-u.4
for
11409922
1 LOC4338253 uncharacterized LOC4338253 4338253 Os05g0269100 8.0 7.8
 8.1
 0.1
 4.4
 -0.8
 0.5

2.0
 1.6
 1.5
 2.7
 2.4
2 LOC4327117 importin subunit alpha-1a-like 4327117 OSNPB_010253300 7.1 7.8
 6.3
 1.1
0.7
 2.8
1.9
 2.6
1.9
 4.2
3.2
 2.7
1.6
 5.2
2.6
 4.8
1.4
 4.5
2.0
 2.3
1.3
 2.1
1.7
 3.0
1.2
3 LOC9269121 la-related protein 6B 9269121 Os12g0225100 7.0 7.1
 6.8
 0.9
0.2
 -1.1
 1.4
-0.3
 2.1
0.9
 3.0
2.0
 2.0
1.5
 1.0
0.5
 0.6
0.1
 2.4
1.7
 3.1
 1.0
4 LOC4323991 probable ribosome biogenesis protein RLP24 4323991 Os01g0514000 6.9 5.4
 8.4
 0.4
-0.7
 1.3
 1.3
0.6
 2.2
2.2
 2.3
 1.5
 2.2
 2.3
 1.3
 3.2
 3.4
5 LOC4337821 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 4337821 Os05g0149800 6.8 6.5
 7.1
 0.5
 2.2
 0.7
-0.3
 1.0
-0.2
 1.9
 1.3
 1.2
-0.3
 1.7
-0.2
 -0.6
-1.2
 4.2
 2.0
6 LOC4332852 nuclear/nucleolar GTPase 2-like 4332852 OSNPB_030352400 6.6 7.4
 5.8
 0.3
 1.5
 2.7
1.9
 4.8
3.5
 1.6
 4.3
 1.5
 2.0
 2.4
 2.0
-0.3
 1.5
0.5
7 LOC4343336 transcription factor GTE11 4343336 Os07g0507700 6.5 7.7
 5.3
 0.3
 0.6
 0.6
0.5
 -0.3
-0.7
 1.5
 2.0
 2.4
0.9
 2.7
0.3
 2.0
0.8
 0.8
 1.5
8 LOC4342038 pre-mRNA-splicing factor syf2 4342038 Os06g0711600 6.4 6.9
 6.0
 0.8
 0.8
 1.2
0.0
 1.1
0.2
 2.6
 2.5
 0.3
 0.5
 -0.8
 2.0
 0.9
9 LOC4345558 MKI67 FHA domain-interacting nucleolar phosphoprotein 4345558 Os08g0412200 6.4 5.7
 7.0
 0.5
 3.3
 3.0
2.9
 4.8
3.8
 2.3
0.4
 2.3
0.5
 2.4
 1.7
 1.8
 3.5
2.0
 2.5
1.7
10 LOC4340090 probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic 4340090 Os06g0142900 6.1 5.4
 6.9
 1.6
 1.0
 0.8
0.7
 0.4
-0.5
 0.3
 -0.9
 0.6
-0.2
 0.5
-0.2
 0.5
-1.4
 0.8
 -1.0
11 LOC4333580 dnaJ protein homolog 4333580 Os03g0648400 6.0 8.1
 3.8
 0.4
0.1
 5.2
3.3
 2.4
2.0
 4.0
3.0
 5.6
4.9
 4.0
3.8
 1.2
0.7
 1.4
1.2
 1.3
0.9
 1.4
1.2
 4.0
3.0
12 LOC4329423 60S ribosomal protein L35 4329423 Os02g0503400 6.0 6.2
 5.8
 -0.1
-0.9
 0.8
0.2
 1.8
1.0
 4.5
4.0
 1.9
0.3
 2.8
1.7
 2.9
2.5
 3.5
1.8
 2.8
2.7
 1.3
1.0
 2.3
1.8
13 LOC4331393 RNA-binding protein pno1 4331393 Os03g0115200 5.9 5.5
 6.3
 -0.1
-0.2
 1.6
 3.9
1.0
 5.6
2.3
 1.1
 3.3
 2.3
0.3
 1.8
0.5
 1.0
0.5
 1.5
 5.4
14 LOC4326337 piRNA biogenesis protein EXD1 4326337 Os01g0566900 5.9 6.9
 5.0
 0.3
 2.7
 1.5
1.0
 0.9
-0.7
 2.3
1.9
 1.0
0.5
 1.4
1.3
 1.5
0.8
 2.8
2.7
 2.6
 1.3
15 LOC4340389 nucleolar GTP-binding protein 1 4340389 Os06g0195900 5.9 7.1
 4.7
 0.3
-1.0
 2.2
0.0
 0.7
0.1
 3.0
1.5
 1.9
0.2
 1.7
0.5
 2.8
1.9
 2.8
1.5
 4.4
2.8
 0.8
0.2
 2.3
1.7
16 LOC4336956 uncharacterized LOC4336956 4336956 Os04g0611300 5.8 6.0
 5.6
 0.1
 2.2
 1.1
0.3
 2.1
1.3
 -0.0
 0.6
 0.5
 1.1
 2.5
 1.4
 1.5
17 LOC4333814 pescadillo homolog 4333814 Os03g0699200 5.6 5.6
 5.6
 0.4
 2.7
 1.9
0.4
 3.5
3.1
 0.6
 1.0
 2.1
1.2
 1.7
1.4
 2.2
2.0
 1.7
 1.2
18 LOC4339555 uncharacterized LOC4339555 4339555 Os05g0554500 5.5 5.4
 5.7
 0.8
 1.6
 1.4
0.3
 -0.2
-0.5
 1.5
 0.6
 2.3
 2.7
 -0.9
 2.5
 1.7
19 LOC4344644 lysine-specific histone demethylase 1 homolog 2-like 4344644 OSNPB_080143400 5.5 5.7
 5.3
 0.3
 -0.6
 2.4
 2.4
 0.8
0.7
 0.3
0.1
 -0.3
 -0.4
 0.9
 0.1
 0.7
20 LOC4343920 vacuolar protein sorting-associated protein 27 4343920 Os07g0618600 5.5 6.5
 4.4
 -0.2
 1.2
 -0.9
-1.5
 -0.5
-1.3
 1.1
 0.5
 -0.1
-0.4
 -0.2
-0.3
 -0.7
-0.8
 -0.4
 1.0
21 LOC4352533 rhodanese-like domain-containing protein 6 4352533 Os12g0563400 5.4 5.1
 5.8
 1.4
 0.6
 1.0
0.2
 2.4
2.0
 1.8
 1.9
 -0.3
-0.3
 0.6
-0.5
 1.3
1.1
 1.3
 1.3
22 LOC4345880 uncharacterized LOC4345880 4345880 Os08g0485700 5.4 7.4
 3.3
 0.5
0.5
 1.1
 2.8
 0.1
 1.9
1.0
 1.7
-0.5
 -0.3
-0.6
 -0.4
-0.5
 2.5
1.4
 1.1
 -0.1
23 LOC4326622 protein SEH1 4326622 Os01g0620100 5.4 4.1
 6.6
 1.2
 3.5
 0.7
0.5
 1.9
1.6
 0.7
 0.7
 1.9
 2.7
 3.2
 2.7
 3.5
24 LOC4344088 pre-mRNA-splicing factor SYF1 4344088 Os07g0644300 5.4 7.2
 3.6
 1.1
 2.2
 0.9
0.7
 1.9
1.0
 2.1
 1.4
 2.7
 2.4
 2.4
 0.5
 0.1
25 LOC4339608 protein DEHYDRATION-INDUCED 19-like 4339608 OSNPB_050562200 5.4 6.2
 4.6
 1.3
-0.1
1.6
0.6
 1.0
0.7
 0.5
 1.9
 -0.0
 0.1
 -0.9
 1.1
 -0.3
26 LOC4324896 PHD finger protein ALFIN-LIKE 6-like 4324896 OSNPB_010887700 5.3 5.1
 5.5
 1.0
0.7
 2.9
2.4
 4.6
3.8
 4.1
3.8
 3.8
2.6
 4.7
3.9
 1.9
1.4
 1.9
1.6
 2.0
1.3
 5.4
4.5
 2.8
2.6
27 LOC4325652 FACT complex subunit SSRP1-A-like 4325652 OSNPB_010184900 5.2 4.5
 5.9
 1.3
-0.7
 4.7
 3.2
1.6
 4.4
3.2
 2.5
 0.9
 1.0
0.9
 1.1
0.4
 1.9
1.1
 2.6
0.8
 2.6
2.5
28 LOC4325375 ketol-acid reductoisomerase, chloroplastic-like 4325375 Os01g0652600 5.2 7.2
1.5
1.1
 1.7
 2.5
-0.1
 2.4
1.9
 1.6
-0.5
 3.1
1.3
 1.8
0.9
 1.7
1.3
 2.5
2.3
 2.8
 4.5
29 LOC4346041 EEF1A lysine methyltransferase 4 4346041 Os08g0517600 5.2 5.3
 5.1
 0.6
 -0.1
 -1.1
-1.1
 -0.6
-0.8

-0.3
 -0.1
 0.5
 1.1
 1.5
30 LOC4337716 DUF724 domain-containing protein 3 4337716 Os05g0132400 5.2 5.0
 5.3
 0.5
 2.7
0.9
 -1.3
 0.2
 1.3
-0.1
 0.3
-0.0
 0.5
0.4
 0.7
0.4
 1.4
0.6
 0.7
 0.9
31 LOC4331683 uncharacterized LOC4331683 4331683 Os03g0158500 5.2 7.3
 3.0
 1.1
0.4
 1.8
0.5
 2.0
1.5
 2.6
1.4
 1.9
 4.4
 -0.4
-1.6
 -0.5
-1.2
 1.8
0.2
 1.3
 3.0
32 LOC4350201 la-related protein 6B 4350201 Os11g0248200 5.2 5.3
 5.0
 0.9
0.2
 -1.1
 1.4
-0.3
 2.1
0.9
 3.0
2.0
 2.0
1.5
 1.0
0.5
 0.6
0.1
 2.4
1.7
 3.1
 1.0
33 LOC4328385 zinc finger CCCH domain-containing protein 13-like 4328385 OSNPB_020161200 5.1 3.9
 6.4
 3.0
2.4
 1.2
 4.5
2.9
 1.8
1.7
 4.6
 4.1
 0.0
 -0.4
 1.4
 1.8
 0.3
34 LOC4351292 RNA-directed DNA methylation 4 4351292 Os12g0110300 5.1 6.1
 4.1
 0.8
0.3
 1.3
 3.2
 0.9
 1.6
 3.2
 1.7
 1.5
 0.3
 3.0
2.4
 1.8
1.7
35 LOC4342587 uncharacterized LOC4342587 4342587 Os07g0185200 5.1 5.5
 4.7
 1.3
 -0.1
-0.7
 1.6
0.3
 2.1
0.4
 1.5
 2.2
 0.8
-0.8
 0.9
-0.4
 1.9
-0.7
 0.8
 0.5
36 LOC4352229 cyclin-T1-4-like 4352229 OSNPB_120485400 5.0 6.7
 3.4
 1.9
0.9
 1.8
1.8
 3.8
3.2
 1.7
1.2
 4.4
 2.7
 1.9
-0.5
 1.1
-0.4
 2.0
1.9
 4.1
1.9
 0.7
0.6
37 LOC4341897 RNA polymerase I-specific transcription initiation factor RRN3 4341897 Os06g0688100 5.0 5.6
 4.4
 0.4
 2.1
1.9
 4.2
2.2
 1.5
1.4
 2.2
 2.8
 1.9
 1.7
 2.8
 1.4
 3.0
38 LOC4348127 heterogeneous nuclear ribonucleoprotein Q 4348127 Os10g0151800 5.0 4.3
 5.7
 1.5
0.1
 3.5
2.2
 4.2
2.3
 5.6
3.2
 1.4
0.5
 2.9
0.9
 3.4
2.8
 3.3
2.1
 2.3
1.7
 3.4
2.5
 1.5
-0.1
39 LOC4331462 PIN2/TERF1-interacting telomerase inhibitor 1 4331462 Os03g0125300 4.9 5.5
 4.4
 -0.3
 -1.8
 2.9
2.2
 2.9
0.9
 1.3
 0.6
 1.6
 1.1
 3.4
 2.1
 1.5
40 LOC4339810 sm-like protein LSM8 4339810 Os05g0594900 4.9 4.9
 5.0
 -0.7
 0.2
 0.6
-0.7
 0.1
-0.0
 1.3
 1.0
 1.3
 1.4
 -0.2
 1.6
 2.1
41 LOC4329951 serine/arginine-rich splicing factor RSZ23-like 4329951 OSNPB_020610600 4.9 4.6
 5.3
 0.8
-0.3
 6.4
5.6
 5.4
4.6
 8.3
6.6
 3.7
 5.5
 4.1
4.1
 4.3
3.8
 1.4
1.3
 4.5
4.4
 3.8
1.7
42 LOC4344253 ribosome biogenesis protein NSA2 homolog 4344253 Os07g0673100 4.9 4.7
 5.0
 0.3
 4.1
 1.8
1.2
 4.7
4.0
 3.6
 5.0
 3.9
1.9
 3.2
1.8
 3.4
0.9
 1.6
 1.4
43 LOC4327454 uncharacterized LOC4327454 4327454 Os01g0835600 4.8 4.9
 4.7
 0.2
 -0.2
 1.4
1.3
 2.3
1.5
 3.4
 3.2
 2.0
 1.6
 -0.1
 0.7
 0.8
44 LOC4333772 tetratricopeptide repeat protein 38 4333772 Os03g0689900 4.8 4.5
 5.0
 0.5
 -1.2
 0.4
-0.8
 -0.4
-0.9
 0.5
 0.3
 0.9
 0.7
 2.8
 0.6
 1.0
45 LOC4335547 40S ribosomal protein S8-like 4335547 Os04g0349500 4.8 5.3
 4.3
 -0.3
-0.5
 1.7
0.5
 3.4
1.2
 3.6
3.5
 3.3
2.9
 4.4
3.3
 2.3
1.6
 2.1
1.6
 3.6
2.7
 2.1
1.6
 2.1
1.9
46 LOC4350940 oligouridylate-binding protein 1B 4350940 Os11g0620100 4.7 6.1
 3.4
 0.7
0.4
 4.2
1.2
 3.2
3.2
 2.5
2.3
 5.3
2.2
 5.7
3.4
 3.1
1.8
 2.9
2.3
 1.7
1.2
 4.8
2.1
 3.8
2.2
47 LOC4350617 probable alpha-mannosidase At5g13980 4350617 Os11g0525600 4.7 4.7
 4.8
 0.3
 0.0
-0.9
 1.5
1.4
 0.3
0.0
 -0.6
 -0.2
 0.7
0.5
 0.5
0.1
 2.6
1.8
 1.4
0.7
 -0.9
-1.4
48 LOC4351215 serine/arginine-rich SC35-like splicing factor SCL30A 4351215 Os11g0704700 4.7 4.8
 4.6










49 LOC4336943 uncharacterized LOC4336943 4336943 Os04g0610000 4.7 4.4
 5.0
 1.6
1.2









50 LOC4328127 histone deacetylase complex subunit SAP18 4328127 Os02g0122000 4.7 3.8
 5.5
 0.3
 1.4
 2.2
 4.8
 2.7
 1.7
 2.9
1.0
 3.4
1.1
 1.0
1.0
 2.1
 1.6
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