Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4346604   rhodanese-like domain-containing protein 9, chloroplastic 
 osa-r.5   4346604   rhodanese-like domain-containing protein 9, chloroplastic 
 osa-m.8   4346604   rhodanese-like domain-containing protein 9, chloroplastic 
 ath-u.4   AT2G42220   Rhodanese/Cell cycle control phosphatase superfamily protein 
 gma-u.4   100801860   rhodanese-like domain-containing protein 9, chloroplastic-like 
 gma-u.4   100500055   rhodanese-like domain-containing protein 9, chloroplastic 
 sly-u.4   101266002   rhodanese-like domain-containing protein 9, chloroplastic 
 ppo-u.4   18099874   rhodanese-like domain-containing protein 9, chloroplastic 
 mtr-u.4   11440441   rhodanese-like domain-containing protein 9, chloroplastic 

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Top 50 coexpressed genes to 4346604 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa195   Photosynthesis  14 76 23.55
 osa196   Photosynthesis - antenna proteins  11 15 26.83
 osa860   Porphyrin metabolism  2 42 2.45
 osa710   Carbon fixation in photosynthetic organisms  2 77 -
 osa1200   Carbon metabolism  2 273 -

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osa:LOC4346604 (rhodanese-like domain-containing protein 9, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4346604
osa-r.5
for
4346604
osa-m.8
for
4346604
ath-u.4
for
AT2G42220
gma-u.4
for
100801860
gma-u.4
for
100500055
sly-u.4
for
101266002
ppo-u.4
for
18099874
mtr-u.4
for
11440441
1 LOC4340892 chlorophyll a-b binding protein 1B-21, chloroplastic 4340892 Os06g0320500 8.1 7.7
 8.6
 10.8
 4.7
4.0
 11.2
5.2
 5.7
4.1
 2.1
0.6
 2.9
2 LOC4330625 protein CURVATURE THYLAKOID 1A, chloroplastic 4330625 Os02g0731600 7.6 6.2
 9.0
 5.6
 5.2
4.7
 9.1
5.5
 4.4
2.6
 1.7
1.6
 5.0
3 LOC4343583 chlorophyll a-b binding protein CP29.1, chloroplastic 4343583 Os07g0558400 7.0 5.3
 8.7
 9.4
8.0
 5.9
4.9
 8.7
5.6
 5.4
 3.8
2.4
 5.8
3.3
4 LOC4334300 photosystem I reaction center subunit III, chloroplastic 4334300 Os03g0778100 7.0 7.1
 6.8
 7.8
 4.9
 7.7
 7.7
6.8
 2.4
 5.9
5 LOC4345663 chlorophyll a-b binding protein P4, chloroplastic 4345663 Os08g0435900 6.9 5.6
 8.2
 9.2
 6.0
5.2
 7.8
6.6
 4.9
3.2
 2.0
 5.1
6 LOC4351694 photosystem I reaction center subunit N, chloroplastic 4351694 Os12g0189400 6.8 5.9
 7.8
 7.9
 4.6
3.8
 5.5
4.3
 5.4
 2.0
1.9
 5.1
7 LOC4348209 uncharacterized LOC4348209 4348209 Os10g0181600 6.7 6.0
 7.4
5.4
2.5
 5.9
4.3
 3.6
 1.3
 5.3
8 LOC4328623 chlorophyll a-b binding protein 8, chloroplastic 4328623 Os02g0197600 6.7 7.0
 6.4
 8.4
 4.6
3.6
 6.7
4.5
 5.8
3.6
 2.5
 5.2
9 LOC4333359 chlorophyll a-b binding protein, chloroplastic-like 4333359 OSNPB_030592500 6.6 5.2
 8.0
 10.4
10.3
 5.0
4.9
 9.5
7.3
 5.8
4.2
 3.7
2.6
 4.5
3.9
10 LOC4349004 protochlorophyllide reductase B, chloroplastic-like 4349004 OSNPB_100496900 6.5 4.5
 8.5
 6.2
5.5
 5.9
3.1
 9.2
5.0
 5.3
5.0
 3.0
1.8
 5.5
11 LOC4342404 photosystem I reaction center subunit psaK, chloroplastic 4342404 Os07g0148900 6.4 6.0
 6.8
 8.0
 4.5
3.9
 5.8
4.6
 5.9
 2.0
1.2
 4.6
12 LOC4350176 chlorophyll a-b binding protein CP26, chloroplastic 4350176 Os11g0242800 6.2 6.7
 5.8
 11.2
 6.1
5.2
 9.3
7.2
 5.1
 1.8
1.3
 3.4
13 LOC4335799 photosystem I subunit O 4335799 Os04g0414700 6.2 5.7
 6.8
 9.4
 6.0
5.6
 9.4
6.5
 6.8
 2.0
1.1
 5.0
14 LOC4339270 photosystem II reaction center W protein, chloroplastic-like 4339270 Os05g0508900 6.1 4.3
 7.9
 9.0
 5.1
4.8
 6.7
5.9
 7.0
6.2
 2.8
2.1
 4.7
1.5
15 LOC4340704 protein CURVATURE THYLAKOID 1A, chloroplastic 4340704 Os06g0264800 6.0 4.2
 7.8
 5.6
 5.2
4.7
 9.1
5.5
 4.4
2.6
 1.7
1.6
 5.0
16 LOC4343070 photosystem I reaction center subunit IV, chloroplastic 4343070 Os07g0435300 5.9 4.9
 6.9
 10.2
8.2
 5.2
4.5
 7.2
5.6
 6.4
6.1
 3.4
 6.5
4.8
17 LOC4342370 oxygen-evolving enhancer protein 2, chloroplastic 4342370 Os07g0141400 5.7 5.3
 6.0
 7.8
 5.6
5.6
 6.8
5.2
 5.3
 2.3
2.1
 5.0
3.9
18 LOC4339833 plastocyanin, chloroplastic-like 4339833 OSNPB_060101600 5.6 6.9
 4.3
 8.9
5.4
 3.5
3.2
 5.0
3.7
 4.1
 2.2
2.0
 7.3
19 LOC4343709 photosystem I chlorophyll a/b-binding protein 2, chloroplastic 4343709 Os07g0577600 5.6 5.7
 5.5
 8.2
 5.8
5.7
 7.8
6.2
 7.7
 3.2
3.1
 4.3
20 LOC4346326 photosystem I reaction center subunit II, chloroplastic 4346326 Os08g0560900 5.6 8.1
9.5
7.8
 4.4
3.7
 6.5
4.2
 8.8
 3.6
2.9
 6.3
21 LOC4331129 uncharacterized LOC4331129 4331129 Os02g0815400 5.6 4.6
 6.5
 2.1
 1.6
 1.4
 2.8
 1.3
 1.6
22 LOC4343604 chlorophyll a-b binding protein of LHCII type III, chloroplastic 4343604 Os07g0562700 5.5 6.0
 5.0
 12.5
 5.7
5.6
 9.7
5.8
 4.1
3.6
 2.4
 4.5
23 LOC4339593 photosystem I reaction center subunit VI, chloroplastic-like 4339593 OSNPB_050560000 5.5 4.7
 6.3
 13.7
7.8
 5.4
5.4
 8.0
5.7
 8.2
6.9
 3.0
 9.4
24 LOC4342001 thylakoid lumenal 16.5 kDa protein, chloroplastic 4342001 Os06g0705100 5.5 5.9
 5.0
 2.2
 3.4
2.7
 6.6
3.0
 7.2
 1.7
0.9
 4.0
25 LOC4324599 chlorophyll a-b binding protein 2, chloroplastic-like 4324599 OSNPB_010600900 5.3 4.9
 5.7
 10.4
10.3
 5.0
4.9
 9.5
7.3
 5.8
4.2
 3.7
2.6
 4.5
3.9
26 LOC4329783 photosystem II 5 kDa protein, chloroplastic 4329783 Os02g0581100 5.3 3.6
 7.0
 8.5
 5.0
3.6
 7.7
6.7
 0.7
 2.9
0.8
 6.0
4.5
27 LOC4332745 photosystem II repair protein PSB27-H1, chloroplastic 4332745 Os03g0333400 5.3 5.6
 4.9
 5.9
 3.2
2.1
 6.4
4.0
 3.4
 1.8
1.6
 4.5
28 LOC4332805 uncharacterized LOC4332805 4332805 Os03g0343900 5.2 3.0
 7.3





29 LOC4336028 chlorophyll a-b binding protein CP24, chloroplastic 4336028 Os04g0457000 5.1 5.4
 4.9
 11.4
 5.9
5.6
 10.2
7.2
 4.1
3.7
 3.8
3.0
 4.9
30 LOC4324705 chlorophyll a-b binding protein of LHCII type 1 4324705 Os01g0720500 5.1 5.9
 4.3
 10.4
10.3
 5.0
4.9
 9.5
7.3
 5.8
4.2
 3.7
2.6
 4.5
3.9
31 LOC4324479 oxygen-evolving enhancer protein 1, chloroplastic 4324479 Os01g0501800 5.1 5.1
 5.0
 6.5
6.0
 5.6
5.4
 7.1
5.5
 4.6
 3.1
3.0
 6.7
6.1
32 LOC4344539 photosystem II core complex proteins psbY, chloroplastic 4344539 Os08g0119800 4.9 3.3
 6.5
 6.5
 4.6
2.8
 6.9
4.5
 4.8
 3.3
2.7
 6.9
3.3
33 LOC9266204 nuclear transcription factor Y subunit C-2-like 9266204 OSNPB_030251350 4.9 4.8
 5.0
 -0.4
-0.7
 0.5
0.3
 1.4
0.1
 3.7
0.6
 1.5
1.1
 4.0
-0.3
34 LOC4352085 photosystem I reaction center subunit XI, chloroplastic 4352085 Os12g0420400 4.9 4.8
 5.0
 7.8
 5.1
4.2
 7.2
3.6
 7.6
5.1
 1.7
0.9
 7.0
35 LOC4329862 rhodanese-like domain-containing protein 11, chloroplastic 4329862 Os02g0596000 4.9 4.9
 4.9
 2.7
 1.4
 0.8
 0.9
 0.8
 1.2
36 LOC4336044 glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 4336044 Os04g0459500 4.8 5.2
 4.5
 8.6
3.5
 2.1
1.9
 4.4
3.7
 4.6
2.7
 -0.5
 4.4
37 LOC4338729 UPF0603 protein Os05g0401100, chloroplastic-like 4338729 OSNPB_050401100 4.8 4.0
 5.6
 5.4
 4.2
3.7
 7.0
4.4
 5.0
 1.6
-0.2
 4.3
38 LOC4336886 thylakoid lumenal 29 kDa protein, chloroplastic 4336886 Os04g0602100 4.7 3.1
 6.3
 14.2
 4.1
2.2
 5.7
4.9
 2.3
 1.7
 5.6
39 LOC4338302 protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 4338302 Os05g0291700 4.7 6.1
 3.3
 8.4
 5.3
4.5
 7.8
5.2
 7.4
 3.3
1.7
 3.2
40 LOC4326901 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 4326901 Os01g0279100 4.7 4.6
 4.8
 9.1
 5.0
4.6
 7.0
6.5
 5.2
 2.4
 5.4
41 LOC4347659 rhodanese-like domain-containing protein 14, chloroplastic 4347659 Os09g0530000 4.7 4.1
 5.3
 6.4
 3.7
1.9
 5.7
2.7
 4.4
 2.6
1.2
42 LOC4330608 calcium sensing receptor, chloroplastic 4330608 Os02g0729400 4.6 4.0
 5.1
 7.4
 2.6
0.5
 3.2
1.3
 3.0
 1.4
 3.1
1.0
43 LOC4330413 phosphoribulokinase, chloroplastic 4330413 Os02g0698000 4.5 4.1
 4.8
 2.8
 2.6
1.3
 5.1
2.4
 4.3
 1.8
-0.0
 4.4
44 LOC4333882 zinc finger protein CONSTANS-LIKE 16 4333882 Os03g0711100 4.5 4.9
 4.0





45 LOC4328925 protein THYLAKOID RHODANESE-LIKE, chloroplastic-like 4328925 Os02g0257300 4.4 5.0
 3.9
 8.8
 5.5
5.3
 5.8
5.2
 4.4
3.4
 2.1
2.1
 3.3
46 LOC4334845 PGR5-like protein 1A, chloroplastic 4334845 Os03g0857400 4.4 4.1
 4.6
 2.5
0.5
 3.5
3.3
 5.4
4.7
 2.9
2.5
 2.5
0.0
 2.4
0.3
47 LOC4349652 uncharacterized LOC4349652 4349652 Os11g0127800 4.3 3.9
 4.7
 3.3
 2.5
 3.7
 3.1
 1.7
0.9
 3.8
48 LOC4331128 uncharacterized LOC4331128 4331128 Os02g0815300 4.3 3.4
 5.1
0.7
-0.5
 1.7
1.1
 2.0
 1.9
 0.2
49 LOC4352606 uncharacterized LOC4352606 4352606 Os12g0575000







50 LOC4325486 probable zinc metalloprotease EGY2, chloroplastic 4325486 OSNPB_010142100 4.2 4.5
 4.0
 1.8
 3.3
1.5
 4.3
3.1
 4.1
 3.2
 2.4
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