Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4347391   nuclear transcription factor Y subunit C-6-like 
 osa-r.5   4347391   nuclear transcription factor Y subunit C-6-like 
 osa-m.8   4347391   nuclear transcription factor Y subunit C-6-like 
 osa-u.4   4341785   nuclear transcription factor Y subunit C-4-like 
 osa-u.4   4345928   nuclear transcription factor Y subunit C-6-like 
 osa-u.4   4328444   nuclear transcription factor Y subunit C-4-like 
 ath-u.4   NF-YC1   nuclear factor Y, subunit C1 
 ath-u.4   NF-YC4   nuclear factor Y, subunit C4 
 gma-u.4   NF-YC02   nuclear factor Y transcription factor family protein 
 gma-u.4   NF-YC13   nuclear factor Y transcription factor 
 sly-u.4   CIP2a   CONSTANS interacting protein 2a 
 sly-u.4   101247122   nuclear transcription factor Y subunit C-1 
 sly-u.4   CIP2b   CONSTANS interacting protein 2b 
 ppo-u.4   18098802   nuclear transcription factor Y subunit C-3 
 ppo-u.4   112327494   nuclear transcription factor Y subunit C-3-like 
 ppo-u.4   7454560   nuclear transcription factor Y subunit C-4 
 mtr-u.4   120578221   nuclear transcription factor Y subunit C-2-like 
 mtr-u.4   11429780   nuclear transcription factor Y subunit C-3 
 mtr-u.4   11410747   nuclear transcription factor Y subunit C-3 

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Top 50 coexpressed genes to 4347391 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  3 177 2.21
 osa3060   Protein export  2 49 2.32
 osa4145   Phagosome  2 82 -
 osa190   Oxidative phosphorylation  2 156 -
 osa4141   Protein processing in endoplasmic reticulum  2 224 -

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osa:LOC4347391 (nuclear transcription factor Y subunit C-6-like) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4347391
osa-r.5
for
4347391
osa-m.8
for
4347391
osa-u.4
for
4341785
osa-u.4
for
4345928
osa-u.4
for
4328444
ath-u.4
for
NF-YC1
ath-u.4
for
NF-YC4
gma-u.4
for
NF-YC02
gma-u.4
for
NF-YC13
sly-u.4
for
CIP2a
sly-u.4
for
101247122
sly-u.4
for
CIP2b
ppo-u.4
for
18098802
ppo-u.4
for
112327494
ppo-u.4
for
7454560
mtr-u.4
for
120578221
mtr-u.4
for
11429780
mtr-u.4
for
11410747
1 LOC4345928 nuclear transcription factor Y subunit C-6-like 4345928 Os08g0496500 7.1 5.9
 8.3
 2.2
1.0
 7.1
1.0
 2.2
0.7
 11.6
2.0
 11.6
1.5
 17.6
1.2
 10.0
1.2
 3.0
-0.9
 3.0
-0.3
 -0.3
-0.9
 8.5
2.9
 8.5
2.8
 3.0
1.2
 2.4
1.9
 3.0
2.4
 3.0
1.9
2 LOC4328667 uncharacterized LOC4328667 4328667 Os02g0204000 6.2 5.1
 7.3
 -0.5
 4.3
 1.3
 1.9
 0.8
 3.3
1.9
 0.6
0.1
 1.0
0.8
 0.1
-0.2
 1.6
1.0
 1.1
 1.0
 0.7
 -0.2
 0.8
 0.3
3 LOC4326359 uncharacterized protein At4g28440 4326359 Os01g0238600 6.1 4.9
 7.3
 2.0
1.0
 5.0
2.6
 2.0
1.5
 0.3
0.2
 1.4
0.2
 3.2
3.0
 0.7
0.6
 4.4
2.9
 2.2
1.3
 5.2
1.5
 2.3
1.9
 2.2
2.0
 1.2
1.0
 0.3
-0.3
 3.7
2.0
 2.1
1.7
4 LOC4343788 MFP1 attachment factor 1 4343788 Os07g0593332 6.0 8.2
 3.8
 -0.1
 3.7
 0.4












5 LOC4348933 uncharacterized LOC4348933 4348933 Os10g0483900 4.7 2.8
 6.5
 0.5
0.4
 5.1
4.2
 1.8
1.3
 1.3
 -0.0
 1.0
0.0
 0.3
-0.3
 1.6
 0.5
 1.8
 0.4
0.3
 0.9
0.5
 -0.8
-0.8
 1.2
 3.6
 2.3
6 LOC4343952 multifunctional methyltransferase subunit TRM112 homolog A 4343952 Os07g0623000 4.6 4.5
 4.6
 1.1
 1.8
 1.1
 -0.3
-0.3
 -0.5
-0.9
 1.4
0.6
 0.7
0.2
 -1.3
 -1.2
 0.9
 1.7
0.1
 1.8
-0.3
 1.2
-1.1
 -0.0
 0.6
 2.0
7 LOC4349135 mitochondrial import inner membrane translocase subunit TIM23-2 4349135 Os10g0519700 4.6 5.3
 3.9
 -0.1
-0.8
 2.7
2.5
 0.5
-0.9
 1.6
-0.5
 0.2
-0.7
 0.8
0.3
 0.4
-0.1
 0.5
0.2
 0.6
0.5
 1.9
0.7
 1.6
1.1
 2.1
0.6
 1.9
0.6
 1.0
-0.5
 2.7
1.7
 2.9
2.7
8 LOC4347003 HMG-Y-related protein A 4347003 Os09g0402100 4.5 4.0
 5.0
 1.2
0.8
 3.9
1.7
 1.7
1.5
 1.4
 0.9
 0.8
0.8
 2.0
1.7
 2.3
1.8
 3.3
2.2
 1.1
0.0
 1.8
1.3
 1.9
1.9
 1.7
1.6
 -0.5
-1.2
 3.1
2.0
 0.1
-0.5
9 LOC4340875 atherin 4340875 Os06g0316100 4.5 2.0
 6.9
 1.8
 5.9
 1.0












10 LOC4337307 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 4337307 Os04g0663800 4.4 4.3
 4.5















11 LOC4342743 acyl carrier protein 1, mitochondrial 4342743 Os07g0222800 4.3 5.9
 2.7
 0.3
 3.3
 -0.3
 0.1
 1.2
 0.6
0.0
 0.4
0.2
 -0.5
 0.6
 -0.1
 0.9
0.5
 0.7
0.7
 0.9
0.1
 -0.7
 0.2
 1.0
12 LOC4347726 mediator of RNA polymerase II transcription subunit 4 4347726 Os09g0540500 4.1 3.4
 4.9
 0.2
 4.6
 0.1
 2.4
 0.3
 0.6
-0.0
 1.2
0.6
 0.9
-1.0
 1.2
-0.8
 2.5
-0.3
 0.8
 0.7
 1.2
 2.5
0.8
 1.4
0.8
 1.8
1.3
13 LOC4335405 protein phosphatase 1 regulatory subunit INH3 4335405 Os04g0295000 4.1 3.2
 5.0















14 LOC4339711 probable DNA-3-methyladenine glycosylase 2 4339711 Os05g0579100 4.1 1.6
 6.6
 0.9
 7.4
 1.1
 2.8
0.5
 1.3
0.2
 2.7
0.5
 -0.0
-0.4
 1.2
0.1
 2.2
1.6
 0.2
-0.1
 -1.1
-1.1
 -0.4
-0.9
 -0.0
-0.1
 1.2
-1.3
 0.5
-0.3
 1.1
0.2
15 LOC4325239 probable gamma-secretase subunit PEN-2 4325239 Os01g0960000 4.0 3.5
 4.5
 1.0
 2.6
 1.2
 2.3
 1.9
 2.3
2.0
 1.0
0.2
 -1.1
 2.2
 1.2
 0.5
 1.3
 -0.4
 0.8
 4.3
 1.8
16 LOC4345122 nuclear pore complex protein NUP43 4345122 Os08g0266600 4.0 3.0
 5.1
 0.6
 2.7
 -1.5
 -0.7
 -0.9
 1.3
0.1
 0.5
-0.0
 0.0
 0.4
 0.1
 1.4
 0.1
 0.3
 -0.9
 1.5
 0.8
17 LOC4340324 protein RTF2 homolog 4340324 Os06g0183900 4.0 3.6
 4.4
 2.9
 2.1
 3.4
 0.9
 -0.3
 3.6
3.2
 -1.4
-1.7
 -0.1
 0.0
 3.0
 2.5
0.3
 1.8
-0.5
 0.9
0.6
 0.3
 1.6
 3.9
18 LOC4333625 uncharacterized LOC4333625 4333625 Os03g0659300 4.0 4.8
 3.1
 -1.5
 0.9
 -0.9
 2.0
 1.2

-0.1
 -0.3
 4.2
 -1.5
 -1.3
 0.3
 1.1
0.0
 2.2
-0.5
 0.9
0.7
19 LOC4329303 vegetative cell wall protein gp1 4329303 Os02g0461900 3.9 3.9
 4.0
 -0.0
 2.4
 1.4
 1.9
 0.8
 -0.0
-0.7
 -1.3
-1.7
 3.0
 -0.3
 -1.4
 -0.4
-1.2
 -0.4
-0.8
 1.3
0.6
 -0.7
 0.4
 -1.2
20 LOC4340496 mediator of RNA polymerase II transcription subunit 6 4340496 Os06g0217500 3.9 2.9
 4.9
 2.3
 3.4
 2.6
 2.1
 2.4
 2.4
 0.6
 1.7
0.4
 0.8
-0.3
 4.5
1.3
 -1.0
 -1.6
 -0.3
 1.0
 2.2
 1.5
21 LOC4325217 uncharacterized LOC4325217 4325217 Os01g0148700 3.9 2.3
 5.5
 0.3
 2.9
 -0.6












22 LOC4342807 uncharacterized LOC4342807 4342807 Os07g0240400 3.8 5.1
 2.5
 -0.7
 1.9
 0.1
 2.3
 0.3
 -0.8
 1.0
 0.0
 1.1
 -0.1
 -0.8
-0.9
 -0.2
-0.5
 -0.2
-0.9
 0.2
-1.2
 0.8
0.4
 0.2
-0.0
23 LOC9271333 protein transport protein Sec61 subunit beta 9271333 Os11g0104050 3.8 5.7
-0.2
-0.4
 3.6
3.4
 1.3
0.2
 0.7
 -0.1
 1.8
1.5
 1.2
0.8
 1.4
0.2
 1.2
-0.4
 1.5
0.9
 0.2
 0.0
 0.7
 0.7
 2.4
 1.0
24 LOC9269540 protein transport protein Sec61 subunit beta 9269540 Os12g0103300 3.8 5.4
-0.2
-0.4
 3.6
3.4
 1.3
0.2
 0.7
 -0.1
 1.8
1.5
 1.2
0.8
 1.4
0.2
 1.2
-0.4
 1.5
0.9
 0.2
 0.0
 0.7
 0.7
 2.4
 1.0
25 LOC4327718 dynein light chain 1, cytoplasmic 4327718 Os01g0256400 3.8 4.7
 2.9
 0.1
 2.2
 0.5
 0.9
 1.3
 1.4
0.7
 0.5
-0.0
 5.0
 2.6
 -1.0
 -1.5
 -1.8
 0.3
 0.8
 4.4
 1.2
26 LOC4335638 SWI/SNF complex component SNF12 homolog 4335638 Os04g0382100 3.8 1.6
 5.9
 0.8
 4.2
 0.4
 1.6
0.8
 1.2
0.5
 1.4
1.0
 0.7
0.7
 -0.5
-0.6
 -0.2
-1.3
 4.9
2.4
 1.7
0.7
 1.7
1.0
 2.1
0.2
 0.4
-0.8
 0.4
-1.1
 2.8
0.4
27 LOC4327262 gametogenetin 4327262 Os01g0316500 3.8 3.8
 3.7
 -0.3
 3.1
 0.2
 0.8
 0.2
 2.3
1.9
 -0.4
-1.1
 -0.0
 1.2
 1.7
 0.5
 0.7
 1.2
 -0.7
 2.2
 2.0
28 LOC4330260 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 4330260 Os02g0668100 3.7 4.6
 2.9
 -0.4
 2.3
 -2.0
 2.7
 1.7
 -0.4
 0.2
 0.4
 1.8
 0.2
 -0.2
 -0.2
 0.5
 0.7
 0.9
 1.2
29 LOC4342588 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 4342588 Os07g0185300 3.7 3.9
 3.6
 -0.5
 3.9
 -1.8
 2.0
0.9
 0.5
-0.3
 1.5
1.2
 -0.9
-1.0
 -0.7
 -0.7
 -0.2
 -0.5
 -0.0
 1.9
 1.2
 1.8
 3.4
30 LOC4332334 splicing factor 3A subunit 2 4332334 Os03g0263500 3.7 3.3
 4.1
 0.2
 2.7
 1.1
 1.6
 -0.0
 2.7
 0.5
 -0.0
 0.5
 1.3
 0.9
-0.0
 0.8
0.6
 2.9
0.5
 0.8
 2.3
 3.1
31 LOC4332015 MFP1 attachment factor 1 4332015 Os03g0209000 3.7 5.5
 1.9
 0.9
0.4
 2.5
2.2
 0.3
0.2
 1.9
0.5
 0.9
-1.0
 0.4
-0.0
 1.0
0.9
 1.3
 1.8
 0.2
 0.8
-0.6
 1.0
-0.3
 1.0
0.3
 1.1
-0.2
 3.3
3.2
 2.3
1.1
32 LOC4347432 glucosamine 6-phosphate N-acetyltransferase 1-like 4347432 OSNPB_090488000 3.7 3.8
 3.6
 0.1
-0.6
 2.7
2.5
 -0.3
-0.5

0.6
-0.7
 0.8
-0.3
 -0.4
 -0.9
 -1.0
 0.5
0.2
 0.3
-0.3
 0.1
-0.7
 -0.3
 -1.3
 -0.0
33 LOC4351910 uncharacterized LOC4351910 4351910 Os12g0257500 3.6 4.3
 3.0
 0.6
 2.9
 1.7
 2.1
0.2
 1.5
-0.3
 0.7
0.6
 0.7
0.2
 1.6
-0.5
 1.0
-1.0
 0.5
-0.1
 -0.3
-0.9
 -1.0
-1.0
 0.9
0.1
 1.7
0.4
 0.0
-0.7
 -0.7
-0.8
34 LOC4326463 chaperone protein dnaJ 20, chloroplastic 4326463 Os01g0101700 3.6 2.1
 5.2
 0.3
 1.7
 0.4
 2.9
 2.4
 0.1
 -1.1
 -0.1
-2.3
 1.0
0.2
 1.4
0.3
 -0.8
-1.4
 -1.0
-1.6
 -0.7
-1.2
 1.4
 3.1
 1.4
35 MAGO2 protein mago nashi homolog 2-like 4351998 OSNPB_120287200 3.6 2.1
 5.1
 1.2
0.5
 4.5
1.1
 0.8
0.7
 -0.2
 -0.3
 2.2
1.6
 2.5
-0.2
 1.4
 1.2
 0.3
 1.8
0.0
 1.5
0.5
 1.9
-0.2
 -0.2
 1.7
 2.2
36 LOC4333027 uncharacterized LOC4333027 4333027 Os03g0392400 3.6 2.0
 5.1
 1.0
0.5
 3.9
3.2
 2.0
0.2
 1.6
1.4
 2.1
0.2
 2.7
2.0
 0.6
0.5
 0.5
0.1
 2.1
1.0
 2.1
2.0
 1.1
1.1
 1.4
1.4
 2.2
1.0
 1.5
0.6
 3.0
2.4
 1.7
1.5
37 LOC4339977 RNA-binding protein 1 4339977 Os06g0127500 3.5 4.0
 3.1
 -0.1
-0.3
 1.8
1.2
 1.2
-1.2
 1.7
 2.2
 2.8
2.4
 2.1
1.2
 2.7
0.3
 2.1
1.3
 3.8
3.5
 1.4
0.5
 1.6
0.8
 1.3
0.3
 1.1
1.0
 2.4
2.0
 4.6
4.3
38 LOC4349322 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial 4349322 Os10g0551600 3.5 5.1
 1.9
 -0.5
 2.1
 -0.6
 0.8
 1.6
 0.2
-0.2
 0.2
-0.6
 0.5
 0.7
 0.3
 0.6
 1.3
 0.8
 -0.4
 1.8
 1.2
39 LOC4326906 leucine-rich repeat protein 1-like 4326906 Os01g0279800 3.5 3.3
 3.7
 1.0
0.9
 2.3
-0.1
 3.3
0.7
 0.1
-0.4
 0.1
-0.7
 3.3
2.0
 0.5
-0.1
 1.5
 -1.2
 3.9
 -0.6
-0.6
 -0.4
-1.1
 -0.8
-2.6
 0.4
 2.5
 2.1
40 LOC4344005 transmembrane emp24 domain-containing protein p24delta9 4344005 Os07g0632700 3.5 3.3
 3.7
 0.1
-0.4
 2.2
1.3
 3.2
-1.0
 1.1
0.8
 1.0
0.5
 1.7
1.7
 -0.3
-0.6
 -0.3
-0.3
 1.2
0.1
 0.3
0.1
 1.0
-0.3
 0.3
0.1
 0.9
0.1
 0.0
-0.4
 -0.1
-0.9
 0.2
-1.3
41 LOC4329443 gamma carbonic anhydrase-like 1, mitochondrial 4329443 Os02g0508000 3.5 4.3
 2.6
 -0.1
 3.0
 -0.3
 0.8
0.6
 0.6
-0.2
 1.9
0.9
 1.2
-0.4
 0.5
 2.9
 0.8
 0.8
-0.3
 0.9
0.3
 0.9
0.4
 0.7
 1.5
 2.4
42 LOC4345702 uncharacterized protein At4g14342 4345702 Os08g0444100 3.5 2.4
 4.5
 0.1
 2.8
 1.3
 0.2
 0.1
 0.7
0.1
 0.8
0.4
 1.9
-0.8
 0.6
-0.8
 0.4
0.0
 -0.1
-0.9
 -0.0
-0.1
 -0.7
-1.4
 0.3
 0.6
 1.7
43 LOC4340205 splicing factor 1 4340205 Os06g0160400 3.5 3.6
 3.3
 0.7
 3.8
 2.0
 2.6
 0.6
 2.4
2.1
 1.3
-0.1
 2.1
 1.6
 3.1
 0.2
-0.1
 1.0
0.4
 1.2
0.6
 1.6
 1.9
 2.4
44 LOC4343288 ATP synthase subunit delta', mitochondrial 4343288 Os07g0495200 3.5 5.1
 1.8
 -1.0
 3.9
 -0.4
 0.3
 0.2
 2.8
2.4
 0.5
0.4
 1.2
0.9
 0.6
0.2
 -0.0
-0.9
 1.2
-0.2
 2.0
1.0
 1.4
0.7
 1.0
 2.3
 2.1
45 LOC9271668 uncharacterized LOC9271668 9271668 Os09g0491676 3.4 4.3
 2.5
 0.9
-0.1
 5.2
3.1
 -0.3
-0.8
 4.3
 1.4
 0.0
-0.0
 0.3
0.0
 0.8
 0.7
 0.5
 0.0
-0.1
 -0.3
-0.7
 0.9
0.1
 0.2
 0.5
 2.2
46 LOC4327681 glycylpeptide N-tetradecanoyltransferase 1 4327681 Os01g0708100 3.4 1.8
 5.0
 0.3
 5.8
 -0.4
 0.7
 1.4
 3.0
1.5
 0.7
0.3
 -0.8
-1.6
 -0.1
-0.7
 3.2
1.0
 2.0
0.8
 1.8
1.5
 0.7
-1.0
 0.7
-1.9
 -0.3
-1.2
 2.5
-0.2
47 LOC4326510 early nodulin-20 4326510 Os01g0939400 3.4 0.8
 5.9
 0.7
 3.5
 0.7
 0.3
 0.8
 -1.1
 0.7
 0.1
 -0.0
 1.9
 0.6
-0.7
 0.6
-1.1
 1.0
0.7
 0.5
 0.1
 1.8
48 LOC4346392 DNA-directed RNA polymerases II, IV and V subunit 3 4346392 Os09g0110400 3.4 1.2
 5.5
 2.1
 2.6
 1.6
 -0.1
-0.5
 -0.3
-0.4
 2.7
2.7
 0.3
-0.0
 -0.7
 0.2
 1.9
 1.9
 1.4
 0.8
 0.5
 3.6
 2.9
49 LOC4331216 uncharacterized LOC4331216 4331216 Os02g0826400 3.3 3.0
 3.7
 2.6
0.5
 3.6
1.8
 3.4
-0.1
 2.7
0.5
 1.4
0.7
 2.8
2.5
 0.3
-0.0


-0.1
 -0.4
 -1.4


50 LOC4342023 protein METHYLENE BLUE SENSITIVITY 1 4342023 Os06g0708600

0.1
 1.2
 3.1
 1.3
 0.1
 1.8
1.6
 0.9
0.1
 0.5
 -0.6
 1.1
 2.3
-1.0
 2.6
-0.9
 0.6
0.0
 -0.5
 1.5
 2.1
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