Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4   7462259   putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 ppo-r.3   7462259   putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 ppo-m.4   7462259   putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 ppo-u.4   7484676   uncharacterized LOC7484676 
 ppo-u.4   7476653   putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 gma-u.4   100775337   pathogen-associated molecular patterns-induced protein A70 
 gma-u.4   102670321   pathogen-associated molecular patterns-induced protein A70 
 gma-u.4   102664184   pathogen-associated molecular patterns-induced protein A70 
 mtr-u.4   25494233   pathogen-associated molecular patterns-induced protein A70 
 mtr-u.4   25494230   pathogen-associated molecular patterns-induced protein A70 
 mtr-u.4   11411531   pathogen-associated molecular patterns-induced protein A70 
 ath-u.4   AT2G26110   bromodomain protein (DUF761) 
 ath-u.4   AT4G26130   cotton fiber protein 
 ath-u.4   AT5G56980   cotton fiber protein 
 sly-u.4   101258979   uncharacterized LOC101258979 
 sly-u.4   101244302   uncharacterized LOC101244302 
 osa-u.4   4327827   uncharacterized LOC4327827 
 osa-u.4   4341332   uncharacterized LOC4341332 
 osa-u.4   4339469   uncharacterized LOC4339469 

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Top 50 coexpressed genes to 7462259 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop4712   Circadian rhythm - plant  3 51 3.76
 pop860   Porphyrin metabolism  1 63 -
 pop53   Ascorbate and aldarate metabolism  1 73 -
 pop520   Amino sugar and nucleotide sugar metabolism  1 172 -
 pop500   Starch and sucrose metabolism  1 189 -

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ppo:LOC7462259 (putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.4
for
7462259
ppo-r.3
for
7462259
ppo-m.4
for
7462259
ppo-u.4
for
7484676
ppo-u.4
for
7476653
gma-u.4
for
100775337
gma-u.4
for
102670321
gma-u.4
for
102664184
mtr-u.4
for
25494233
mtr-u.4
for
25494230
mtr-u.4
for
11411531
ath-u.4
for
AT2G26110
ath-u.4
for
AT4G26130
ath-u.4
for
AT5G56980
sly-u.4
for
101258979
sly-u.4
for
101244302
osa-u.4
for
4327827
osa-u.4
for
4341332
osa-u.4
for
4339469
1 LOC7487745 two-component response regulator-like APRR5 7487745 POPTR_002G179800v3 5.5 3.4
 5.1
 -0.1
-0.1
 0.5
0.3
 0.8
0.7
 0.4
0.3
 0.3
0.1
 1.6
-0.9
 3.0
0.3
 4.3
-1.5
 -1.0
-1.0
 2.7
1.6
 1.6
1.6
 1.3
0.4
 1.2
0.3
 -0.1
 0.7
 1.3
2 LOC7468848 double-stranded RNA-binding protein 1 7468848 POPTR_005G153200v3 5.1 4.1
 3.7
 0.9
0.4
 0.8
0.1
 -0.1
-0.3
 -0.5
-1.1
 0.8
-0.2
 0.3
 -0.0
 2.2
 1.5
 1.2
 0.1
 0.0
 0.5
 -0.1
-0.5
 0.7
0.4
 1.0
0.1
3 LOC7471583 transcription factor HY5 7471583 POPTR_006G251800v3 4.9 3.3
 4.3
 0.2
-0.7
 -0.2
-0.7
 1.8
1.3
 -0.2
-0.6
 0.5
0.3
 -0.6
 -0.2
 0.6
 0.1
-0.3
 0.2
-0.1
 0.5
0.4
 -1.0
 1.0
 0.8
0.3
 1.2
-0.2
 -0.2
-0.6
4 LOC7469838 uncharacterized protein At1g51745 7469838 POPTR_019G048100v3 4.9 3.8
 3.8
 1.3
-0.7
 0.5
-0.9
 0.9
0.0
 1.0
0.5
 0.0
-0.1
 1.3
-0.9
 -0.5
-1.7
 0.6
-0.5
 -0.5
 0.0
 -0.1
 -0.5
-0.5
 -0.5
-1.8
 -0.6
-0.9
 -0.7
-0.7
 0.5
-0.0
5 LOC7468573 uncharacterized LOC7468573 7468573 POPTR_009G044200v3 4.8 2.7
 4.6
 -0.6
-1.1
 0.9
0.5
 1.5
1.3
 -0.5
-0.5
 0.5
0.4
 0.7
 0.6
 3.2
 -0.1
-0.2
 2.7
1.8
 1.2
-0.8
 2.1
 0.8
 0.2
-0.3
 1.8
1.1
 2.2
2.2
6 LOC7454968 uncharacterized LOC7454968 7454968 POPTR_006G093000v3 4.8 3.9
 3.4
 1.4
0.5
 1.8
1.2
 1.6
1.6
 0.7
0.6
 0.8
0.6
 0.4
0.1
 1.1
0.5
 1.0
0.2
 0.9
0.3
 1.1
0.3
 1.9
0.4
 1.4
1.1
 1.8
0.1
 0.2
-0.0
 0.6
0.5
 2.2
-1.1
7 LOC7465535 UDP-glucuronate 4-epimerase 5 7465535 POPTR_003G114600v3 4.6 3.7
 3.4
 0.0
-0.0
 2.6
0.9
 2.4
1.7
 1.2
1.2
 0.6
0.6
 0.9
-0.8
 0.0
-0.2
 2.8
0.7
 0.9
0.1
 0.8
0.5
 3.0
1.7
 2.8
1.8
 1.4
1.2
 1.1
0.5
 1.0
0.9
 1.7
0.6
8 LOC7473250 dnaJ homolog subfamily B member 4 7473250 POPTR_008G194000v3 4.4 3.0
 3.8
 -0.6
-0.8
 0.8
0.4
 2.3
2.1
 1.0
0.0
 1.6
0.7
 0.3
 -0.6
 0.2
 0.6
-0.5
 2.8
-0.6
 0.1
-0.5
 2.2
0.5
 -0.8
-1.0


9 LOC7492759 protein SUPPRESSOR OF PHYA-105 1 7492759 POPTR_014G095300v3 4.4 2.7
 4.0
 -0.3
-0.9
 -0.1
-0.1
 0.9
0.4
 -0.1
-0.4
 0.8
0.3
 0.3
0.2
 0.7
-1.7
 1.1
-0.4
 -0.8
-0.9
 0.8
0.0
 1.1
-0.5
 0.6
0.1
 -0.5
-1.1
 0.5
 -1.2
 -1.2
10 LOC7470411 pre-mRNA-splicing factor syf2 7470411 POPTR_004G176200v3 4.4 3.5
 3.2
 1.6
 -0.4
 0.1
-0.4
 0.3
0.3
 -0.3
-0.4
 -0.1
 -0.2
 1.3
 1.0
 0.8
 -1.0
 1.1
 -0.0
 -0.6
 0.9
 -0.5
11 LOC7469682 oligopeptide transporter 4 7469682 POPTR_009G079500v3 4.4 4.0
 2.7
 0.2
0.1
 1.6
-0.6
 0.4
0.1
 1.1
0.9
 1.7
0.0
 -1.2
 0.4
 0.3
 2.0
-0.9
 0.1
-1.0
 1.4
-0.8
 0.3
-0.2
 0.6
-0.4
 0.5
 0.1
 0.3
12 LOC7472689 serine/threonine-protein kinase tricorner 7472689 POPTR_002G125800v3 4.3 3.2
 3.5
 -1.7
 1.4
 -0.4
-0.4
 -0.2
-0.3
 -0.6
-0.8
 -2.1
 -1.0
 0.8
 -0.3
 -0.3
 0.7
 1.0
0.8
 -0.1
-1.2


13 LOC7474879 uncharacterized protein At5g50100, chloroplastic 7474879 POPTR_015G072000v3 4.3 2.1
 4.5
 -0.7
 0.4
 0.6
0.5
 0.0
-0.3
 1.7
0.1
 -0.2
 0.6
 0.5
 0.0
 1.0
 -0.1
 0.7
 1.8
 -0.2
 0.4
 -0.2
14 LOC7496574 probable methyltransferase At1g27930 7496574 POPTR_003G172300v3 4.2 3.5
 2.9
 -0.0
-1.3
 0.9
0.7
 2.2
1.5
 2.0
1.0
 0.1
-0.1
 0.3
-0.3
 0.4
0.1
 -0.1
-0.2
 -0.3
 6.8
 1.1

0.4
 0.1
 -1.0
15 LOC7496037 uncharacterized LOC7496037 7496037 POPTR_001G018200v3 4.2 3.4
 3.0
 0.5
0.5
 -0.2
-0.2
 0.5
0.3
 -0.1
-0.5
 1.1
1.1
 0.6
 -0.3
 -0.0
 1.3
0.8
 1.0
0.4
 -1.4
-1.7
 0.9
 -0.6
 0.6
-0.3
 0.1
-0.8
 -0.4
-1.1
16 LOC7472328 B-box zinc finger protein 22 7472328 POPTR_011G105400v3 4.1 2.7
 3.6
 0.3
0.2
 -0.8
-1.6
 1.3
0.4
 0.3
-0.4
 0.2
-0.1
 0.9
 2.3
 -1.1
 -0.1
 3.2
 -0.3
 0.6
0.3
 1.1
0.3
 0.2
 0.6
 0.7
17 LOC7467070 putative uncharacterized protein DDB_G0277255 7467070 POPTR_001G088800v3 4.1 2.9
 3.4
 0.5
-0.4
 0.6
0.3
 0.9
0.1
 -0.1
-0.7
 0.6
0.6
 1.0
0.2
 0.8
-0.5
 0.3
-0.7
 0.3
 -0.0
 1.5
 1.0
-1.3
 -0.4
-0.4
 0.8
0.7
 0.2
-1.4
 1.5
0.9
18 LOC18102033 dicarboxylate transporter 1, chloroplastic 18102033 POPTR_009G053800v3 4.1 4.7
0.5
-1.5
 1.2
-0.1
 3.1
2.6
 -0.2
-0.7
 0.4
-0.3
 -0.9
 -0.6
 2.5
 -1.2
 1.1
 -0.3
 -0.3
 1.9
 0.4
 -1.1
 1.2
19 LOC7494148 uncharacterized LOC7494148 7494148 POPTR_014G097800v3 4.0 1.7
 4.5
 -0.0
-1.1
 0.2
0.2
 2.8
2.5
 -0.9
-1.3
 1.1
0.0
 0.4
 0.9
 -0.7
 1.1
-0.2
 1.0
0.9
 0.1
0.1
 2.4
0.2
 1.3
-0.4
 0.3
-1.2
 0.9
-0.5
 0.7
-0.2
20 LOC7466864 protein phosphatase 1 regulatory subunit INH3 7466864 POPTR_005G067400v3 4.0 4.1
 2.1
 -0.1
 -0.1





-0.3
 -0.3
 -0.4




21 LOC7470535 protein LNK1 7470535 POPTR_001G205800v3 4.0 3.8
-0.2
 -0.1
 1.5
1.1
 -0.4
-0.4
 0.6
-0.0
 -0.2
-0.7
 -0.8
-0.9
 4.6
4.3
 -0.7
 1.2
 1.1
 0.5
0.3
 1.7
0.2
 -0.6
 -0.0
 1.0
22 LOC18099297 uncharacterized LOC18099297 18099297 POPTR_005G125000v3 4.0 4.6
0.7
0.4
 0.6
0.1
 1.9
-0.4
 0.7
0.0
 0.3
-0.1
 -0.5
-0.6
 0.7
0.3
 0.8
-0.5
 1.8
1.6
 2.3
1.9
 0.4
-0.6
 1.8
1.2
 1.6
1.2
 0.2
-0.2
 1.3
0.5
 -0.1
-0.4
23 LOC7491363 mitogen-activated protein kinase 19 7491363 POPTR_001G381300v3 4.0 2.4
 3.7
 -0.7
-0.8
 1.5
0.1
 1.9
1.3
 0.6
0.2
 1.7
0.7
 1.6
1.1
 0.7
-0.1
 1.8
1.1
 2.1
-0.6
 2.6
1.0
 1.2
0.8
 2.2
1.9
 -0.7
-0.8
 0.5
-0.1
 2.9
0.7
 2.1
1.1
24 LOC7491408 granule-bound starch synthase 1, chloroplastic/amyloplastic 7491408 POPTR_001G449500v3 3.9 4.3
0.2
 0.6
 0.6
0.5
 -0.2
-0.4
 1.0
0.9
 1.0
0.7
 1.2
-1.3
 2.4
1.2
 -0.8
 0.1
 0.1
 0.9
 1.9
 -0.1
-0.5
 0.2
-0.0
 0.7
0.6
25 LOC7464572 YTH domain-containing family protein 2 7464572 POPTR_010G175500v3 3.9 2.4
 3.6
 -0.2
-0.4
 1.4
0.5
 0.2
-0.4
 0.3
-0.1
 1.8
0.0
 0.7
-1.2
 -0.4
-0.8
 1.9
0.5
 0.6
-0.3
 0.4
0.3
 1.5
-1.6
 1.5
 -1.4
 -0.5
 -2.3
 -0.9
26 LOC7494681 ATP-dependent zinc metalloprotease FTSH, chloroplastic 7494681 POPTR_005G249200v3 3.9 3.0
 2.9
 -0.0
-1.1
 0.2
0.1
 1.4
1.1
 -0.6
-0.7
 0.3
-0.1
 -0.1
 -1.0
 1.3
 -0.0
-0.9
 0.3
0.3
 0.6
0.2
 0.4
 0.8
 0.5
 0.8
 1.1
27 LOC7455636 protein trichome birefringence 7455636 POPTR_006G193900v3 3.9 2.8
 3.2
 -0.2
-0.2
 2.8
1.2
 2.1
2.0
 1.1
0.3
 1.6
0.0
 0.2
-0.3
 1.4
0.7
 0.8
0.4
 3.5
1.2
 0.9
-0.0
 0.2
0.1
 2.6
0.4
 0.8
-0.2
 0.8
-0.9
 1.5
-0.6
 -0.1
-0.2
28 LOC7472662 interferon-related developmental regulator 1 7472662 POPTR_002G119100v3 3.8 1.2
 4.7
 -0.3
-1.3
 0.5
-0.4
 0.5
0.5
 0.1
-0.1
 0.2
-0.5
 -1.0
 -0.3
 1.7
 -1.2
 0.3
 1.5
 -0.5
-0.8
 -0.6
-1.0
 -0.0
-0.9
 -1.4
-2.0
 -0.1
-0.7
29 LOC7497859 probable serine/threonine-protein kinase clkA 7497859 POPTR_003G141900v3 3.8 3.9
 2.0
 0.5
-0.4
 0.6
0.3
 0.9
0.1
 -0.1
-0.7
 0.6
0.6
 1.0
0.2
 0.8
-0.5
 0.3
-0.7
 0.3
 -0.0
 1.5
 1.0
-1.3
 -0.4
-0.4
 0.8
0.7
 0.2
-1.4
 1.5
0.9
30 LOC7497225 heavy metal-associated isoprenylated plant protein 39 7497225 POPTR_002G163400v3 3.8 4.6
 1.3
 2.2
1.8
 0.9
0.5
 0.6
0.5
 1.3
0.9
 3.0
2.2
 2.4
2.2
 1.5
1.2
 1.5
1.4
 2.3
 0.4
 0.2
 2.3
1.8
 1.4
0.9
 -0.2
-0.5
 0.2
-0.6
 1.8
0.1
31 LOC7467497 uncharacterized LOC7467497 7467497 POPTR_008G154100v3 3.8 4.7
0.6
-0.3
 1.2
-0.3
 0.7
0.5
 1.7
1.4
 1.0
0.3
 0.4
0.3
 0.1
-0.4
 1.8
1.4
 0.6
 0.8
 -1.7
 0.4
0.1
 0.7
0.1
 0.2
-1.0
 0.6
0.3
 2.3
0.8
32 LOC7468126 protein translation factor SUI1 homolog 2 7468126 POPTR_010G151700v3 3.8 2.7
 3.1
 0.7
0.1
 1.0
0.0
 1.0
1.0
 1.9
1.5
 0.3
0.3
 0.9
0.6
 0.2
0.1
 1.1
0.9
 0.3
0.1
 3.1
0.1
 1.2
0.7
 0.1
-0.8
 1.0
-0.9
 -0.4
-0.7
 0.7
0.5
 0.7
0.6
33 LOC7459540 xyloglucan galactosyltransferase MUR3 7459540 POPTR_002G256200v3 3.8 2.0
 3.8
 0.3
-0.9
 1.5
1.4
 2.6
1.3
 0.4
0.2
 0.6
0.2
 0.1
-1.3
 0.6
-0.2
 1.7
1.1
 0.2
-1.1
 0.2
-0.2
 2.0
0.8
 2.3
 -0.7
 1.2
1.0
 0.6
0.2
 1.7
0.2
34 LOC18102115 probable carboxylesterase 12 18102115 POPTR_009G104300v3 3.8 4.5
2.1
1.1
 2.3
1.9
 3.0
2.8
 1.4
1.2
 3.6
3.4
 1.9
1.2
 2.3
1.2
 2.1
1.2
 1.8
1.6
 1.4
1.2
 1.4
1.2
 1.2
1.1
 1.7
0.4
 0.8
 -0.1
 0.9
35 LOC7482489 SPX domain-containing protein 4 7482489 POPTR_017G086600v3 3.7 3.4
 2.4
 -0.0
 0.5
 -1.1
 0.7
 0.4
 1.1
 -0.7
 -1.6
 2.8
 -0.8
 -0.9
 -0.5
-1.2
 -0.9
-1.0
 -0.4
 0.3
 0.7
36 LOC7455224 uncharacterized LOC7455224 7455224 POPTR_019G056400v3 3.7 2.6
 3.2
 -0.7
 1.2
 1.3
0.7
 0.7
-0.1
 1.0
0.8
 -1.0
 -0.1
 1.8
 -0.4
 1.0
 0.3
 0.1
 1.1
 0.4
 -0.4
 0.0
37 LOC7474691 uncharacterized LOC7474691 7474691 POPTR_006G068200v3 3.7 3.3
 2.4
 2.4
-0.2
 1.2
1.0
 2.2
0.8
 0.4
0.3
 1.5
0.7
 0.7
-0.0
 2.7
0.4
 2.2
-1.7
 -0.1
-0.1
 1.4
0.7
 1.7
0.1
 0.8
-0.2
 0.1
-0.4
 0.5
-0.1
 0.1
-0.3
 0.9
0.5
38 LOC7474837 nudix hydrolase 4 7474837 POPTR_015G035000v3 3.7 2.8
 2.9
 1.4
0.8
 0.0
-0.1
 0.5
0.0
 0.9
0.5
 0.4
0.2
 1.0
0.6
 1.1
0.7
 1.0
0.5
 0.5
-0.2
 1.2
0.0
 1.3
0.6
 -0.7
-1.0
 2.0
-0.1
 0.8
-0.0
 1.7
0.5
 2.4
0.7
39 LOC7490937 transmembrane protein 64 7490937 POPTR_001G114600v3 3.7 3.4
0.4
-0.0
 0.6
-1.3
 -0.6
-0.7
 1.5
1.1
 -0.6
-1.2
 0.0
 -1.5
 -0.2
 1.7
-0.5
 1.2
-0.7
 2.3
0.2
 1.3
 -0.2
 -0.1
 1.1
 1.5
40 LOC18102353 dnaJ homolog subfamily B member 4 18102353 POPTR_010G035000v3 3.7 3.6
-0.6
-0.8
 0.8
0.4
 2.3
2.1
 1.0
0.0
 1.6
0.7
 0.3
 -0.6
 0.2
 0.6
-0.5
 2.8
-0.6
 0.1
-0.5
 2.2
0.5
 -0.8
-1.0


41 LOC7474442 high mobility group B protein 1 7474442 POPTR_010G189900v3 3.6 3.3
 2.4
 0.7
0.6
 0.4
0.3
 -0.0
-0.0
 0.5
0.2
 0.8
0.7
 1.1
 0.2
 -1.1
 2.5
 0.6
 -0.1
 0.9
 -1.3


42 LOC7488720 protein DETOXIFICATION 44, chloroplastic 7488720 POPTR_016G126000v3 3.6 2.8
 2.8
 -0.9
 -0.6
 0.6
-0.6
 -0.3
-1.3
 -0.7
-0.9
 -0.1
 -0.0
 -0.4
 -1.9
 -1.8
 -1.0
 1.7
 0.1
 -0.3
 -0.1
 0.4
43 LOC7491114 BEL1-like homeodomain protein 1 7491114 POPTR_009G017400v3 3.6 3.1
 2.6
 3.7
3.1
 -0.4
-0.8
 1.5
1.0
 0.8
0.2
 1.9
1.7
 1.7
1.3
 1.0
-0.5
 1.9
0.2
 -0.0
 0.5
 0.8
 0.6
0.2
 0.1
-0.5
 -0.3
 0.4
 0.3
44 LOC7457132 ABC transporter F family member 5 7457132 POPTR_007G080600v3 3.6 3.7
0.3
-0.6
 -0.0
-0.9
 2.3
1.4
 -0.0
-0.0
 0.0
-0.3
 -0.6
 -0.6
 3.1
 -0.6
 -0.8
 0.1
 1.1
 -0.1
 0.7
 0.2
 0.8
45 LOC7485817 ubiquitin-conjugating enzyme E2 32 7485817 POPTR_010G143900v3 3.6 1.9
 3.7
 1.0
-0.3
 -1.5
-2.5
 -0.6
-1.2
 1.0
0.6
 0.1
-0.7
 1.7
 3.0
 -1.6
 -0.3
 0.6
 0.0
 -0.3
 -0.1
 0.0
 0.1
 0.3
46 LOC7494246 basic leucine zipper 23 7494246 POPTR_009G134900v3 3.6 3.3
 2.3
 1.4
0.5
 -0.2
-0.2
 0.4
0.0
 0.3
0.2
 0.4
-0.0
 0.8
0.2
 -0.1
-0.9
 1.4
-0.2
 0.4
0.2
 2.3
1.4
 1.2
-0.3
 0.4
 -0.4
 0.2
-0.2
 -0.1
-0.8
 1.3
1.2
47 LOC7493480 protein TIFY 6B 7493480 POPTR_012G044900v3 3.6 3.8
 1.8
 0.9
0.8
 1.7
0.5
 1.3
1.0
 0.4
0.1
 -0.3
-0.7
 1.3
-1.1
 0.8
-0.2
 4.1
0.7
 2.0
-0.2
 0.7
-1.2
 3.3
0.6
 2.4
2.0
 0.8
0.7
 0.5
0.4
 0.9
0.3
 1.5
0.4
48 LOC7482173 CDGSH iron-sulfur domain-containing protein NEET 7482173 POPTR_012G130600v3 3.6 2.4
 3.2
 -0.9
-1.6
 0.5
-0.2
 0.1
-0.2
 -0.6
-0.7
 -0.3
-1.3
 -0.1
 -0.2
 1.0
 -1.4
 -0.3
 -1.2
 -1.8
 1.5
 0.3
 1.0
 0.7
49 LOC18099279 phosphatidylinositol transfer protein 3 18099279 POPTR_005G123200v3 3.6 3.9
1.7
0.4
 2.5
1.8
 1.1
0.9
 0.1
-0.4
 1.2
1.2
 1.7
0.7
 2.3
0.1
 -0.4
-0.7
 -0.0
-0.8
 -0.1
-0.5
 -0.2
-0.3
 2.4
0.4
 0.1
-1.0
 -0.2
 -0.5
 0.2
50 LOC7474698 heme oxygenase 1, chloroplastic 7474698 POPTR_006G069700v3 3.6 3.8
 1.7
 1.1
-0.3
 1.3
-1.8
 0.4
-0.3
 1.0
0.9
 0.7
0.3
 1.1
 0.3
 -0.1
 -0.3
-1.0
 1.2
-0.1
 1.5
-0.5
 -0.4
 -0.2
 -0.7
 -0.0
 0.5
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