Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4  7462600  floral homeotic protein APETALA 2 
 ppo-r.3  7462600  floral homeotic protein APETALA 2 
 ppo-m.4  7462600  floral homeotic protein APETALA 2 
 ppo-u.4  18100239  ethylene-responsive transcription factor RAP2-7 
 ppo-u.4  7489744  AP2-like ethylene-responsive transcription factor TOE3 
 ppo-u.4  7465291  ethylene-responsive transcription factor RAP2-7 
 gma-u.4  100794096  floral homeotic protein APETALA 2 
 gma-u.4  100786333  floral homeotic protein APETALA 2 
 gma-u.4  100792442  floral homeotic protein APETALA 2 
 mtr-u.4  25493474  floral homeotic protein APETALA 2 
 mtr-u.4  11425769  APETALA2-like protein 2 
 mtr-u.4  11417561  AP2-like ethylene-responsive transcription factor TOE3 
 ath-u.4  AP2  Integrase-type DNA-binding superfamily protein 
 ath-u.4  TOE3  target of early activation tagged (EAT) 3 
 ath-u.4  RAP2.7  uncharacterized protein 
 sly-u.4  AP2c  APETALA2-like protein AP2c 
 sly-u.4  AP2d  APETALA2-like protein AP2d 
 sly-u.4  AP2a  APETALA2a 
 osa-u.4  9271266  ethylene-responsive transcription factor RAP2-7 
 osa-u.4  4334582  AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.4  4342787  AP2-like ethylene-responsive transcription factor TOE3 

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Top 50 coexpressed genes to 7462600 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop3013   Nucleocytoplasmic transport  1 147 -
 pop270   Cysteine and methionine metabolism  1 150 -
 pop3015   mRNA surveillance pathway  1 168 -
 pop3040   Spliceosome  2 261 -
 pop4075   Plant hormone signal transduction  2 355 -

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ppo:LOC7462600 (floral homeotic protein APETALA 2) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.4
for
7462600


ppo-r.3
for
7462600


ppo-m.4
for
7462600


ppo-u.4
for
18100239


ppo-u.4
for
7489744


ppo-u.4
for
7465291


gma-u.4
for
100794096


gma-u.4
for
100786333


gma-u.4
for
100792442


mtr-u.4
for
25493474


mtr-u.4
for
11425769


mtr-u.4
for
11417561


ath-u.4
for
AP2


ath-u.4
for
TOE3


ath-u.4
for
RAP2.7


sly-u.4
for
AP2c


sly-u.4
for
AP2d


sly-u.4
for
AP2a


osa-u.4
for
9271266


osa-u.4
for
4334582


osa-u.4
for
4342787

1 LOC7489438 uncharacterized LOC7489438 7489438 POPTR_018G105300v3 4.9 2.8
4.7
2.1
-0.3
1.5
0.4
1.5
-0.3
1.5
1.3
1.9
1.8
2.0
1.7
-0.5
-0.2
1.4
1.9
-0.5
1.8
-0.7
0.3
-2.2
1.5
1.2
2.0
1.4
0.5
-1.5
0.1
-0.2
-1.3
2 LOC7489744 AP2-like ethylene-responsive transcription factor TOE3 7489744 POPTR_005G140700v3 4.5 2.6
4.4
3.3
2.5
4.5
2.3
4.7
3.3
8.8
4.3
7.7
4.8
8.8
6.8
4.9
1.0
2.3
1.0
6.6
0.8
3.6
1.9
3.1
1.9
3.6
3.1
3.3
2.8
3.3
2.4
2.8
0.4
-0.1
-0.4
1.9
1.9
4.9
2.1
3 LOC7458200 E4 SUMO-protein ligase PIAL1 7458200 POPTR_003G133000v3 4.4 3.0
3.7
2.1
0.3
-0.7
0.9
0.2
1.0
0.6
1.4
1.1
-0.4
-0.4
-0.1
-1.4
0.3
0.3
1.2
0.1
0.7
-0.1
2.1
0.9
2.0
0.9
1.1
-0.5
0.5
1.7
4 LOC7488909 uncharacterized LOC7488909 7488909 POPTR_014G071400v3 4.2 4.5
2.0
1.5
-0.6
-0.9
0.6
0.1
0.5
-0.3
1.1
1.0
-0.1
-0.1
-0.8
0.3
0.4
0.9
-0.7
0.3
-0.6
1.0
-0.4
0.7
5 LOC7477107 regulation of nuclear pre-mRNA domain-containing protein 1B 7477107 POPTR_005G080600v3 4.1 3.3
3.1
2.9
2.9
0.9
0.8
1.4
1.1
0.7
0.4
1.1
1.1
1.3
1.2
-0.5
0.2
0.9
1.3
0.9
0.4
-0.2
0.8
0.3
-0.1
-0.1
1.2
-0.2
0.2
1.7
6 LOC7457865 protein TIME FOR COFFEE 7457865 POPTR_008G151200v3 4.1 3.9
2.4
3.4
2.5
0.2
-0.5
2.4
1.8
1.7
0.8
2.0
1.5
1.8
-0.0
0.9
-0.1
3.4
2.5
0.2
2.5
0.5
2.0
0.2
0.9
1.2
1.1
7 LOC7490896 uncharacterized LOC7490896 7490896 POPTR_008G020600v3 4.0 3.7
2.4
2.1
1.8
0.7
0.0
1.8
0.3
0.6
0.2
-0.3
-0.3
0.6
-0.4
0.0
-0.6
-0.2
-1.2
0.8
-0.6
-0.1
-0.5
-1.4
-0.8
1.5
0.8
-0.7
-0.9
0.5
-0.3
1.1
0.2
8 LOC18107676 receptor-like serine/threonine-protein kinase ALE2 18107676 POPTR_018G068100v3 4.0 4.5

1.9
0.8
1.0
0.9
2.0
1.9
0.5
0.2
1.5
1.4
1.0
0.5
0.3
0.1
3.2
1.2
1.5
-0.3
2.0
0.3
2.9
1.5
0.6
-0.3
-0.6
0.7
0.6
0.8
0.7
1.1
1.0
0.7
0.5
9 LOC7488883 uncharacterized LOC7488883 7488883 POPTR_014G066000v3 3.9 4.0
2.0
4.1
0.6
3.0



1.2
-0.4
0.9
0.2
0.7
0.9
-1.0
0.7
1.1
-0.1
1.1
-0.0
10 LOC7480002 transcription factor UNE12 7480002 POPTR_002G045400v3 3.9 4.0
2.0
0.6
-0.2
0.8
0.4
-0.3
-0.7
1.1
0.7
2.3
1.6
1.3
1.0
1.3
0.4
1.6
0.6
0.3
-0.6
2.9
2.3
0.1
0.0
0.9
0.3
0.7
-0.1
0.5
0.5
0.8
0.7
-0.7
-0.9
0.6
0.4
1.2
0.7
11 LOC18107407 protein decapping 5 18107407 POPTR_017G111500v3 3.9 4.2

2.0
1.7
0.8
0.3
0.5
0.1
1.5
0.8
1.4
1.1
1.0
0.4
-0.1
-0.5
0.7
1.4
0.6
0.1
1.2
0.1
0.8
-0.1
-0.9
0.5
-0.2
1.3
-0.4
12 LOC7484444 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 7484444 POPTR_012G092000v3 3.9 2.7
3.3
2.2
1.1
2.0
0.6
0.5
-0.3
-0.7
0.2
-0.7
0.5
-0.6
1.8
-0.2
0.1
0.6
1.1
-0.5
1.3
-1.3
0.7
0.5
13 LOC18106044 uncharacterized LOC18106044 18106044 POPTR_016G013400v3 3.8 5.1

0.5
0.2
0.1
-0.4
0.2
0.1
2.3
2.1
0.6
0.3
2.4
1.7
0.6
1.6
1.6
-0.4
1.2
-0.6
-0.5
0.9
-0.0
-0.6
-0.6
1.3
0.9
1.5
0.4
14 LOC7480015 protein indeterminate-domain 12 7480015 POPTR_002G048000v3 3.8 4.5

1.8
1.6
1.9
1.8
0.9
0.7
2.4
2.3
2.7
1.4
2.4
2.2
1.0
0.9
1.3
0.8
0.2
-0.5
2.2
2.0
1.5
-0.1
1.5
0.6
3.1
2.7
2.2
2.0
2.0
1.5
0.9
0.8
1.0
0.6
1.3
0.8
15 LOC7457748 uncharacterized LOC7457748 7457748 POPTR_015G078300v3 3.8 3.7

1.2
1.0
-0.0
-1.8
-1.6
-1.7
0.8
0.7
0.6
0.4
2.0
1.9
0.3
-1.8
1.0
0.3
-0.1
-0.1
-1.2
0.8
2.6
-1.2
0.7
0.4
16 LOC7496457 uncharacterized LOC7496457 7496457 POPTR_012G007000v3 3.8 2.9
3.0
1.7
-1.3
1.4
-0.8
-0.3
-0.9
0.3
-0.2
1.5
0.6
1.0
-1.5
0.6
-0.4
0.3
-1.1
-1.7
-1.7
1.0
-0.4
0.2



17 LOC18094104 uncharacterized LOC18094104 18094104 POPTR_001G134800v3 3.8 3.6

2.2
1.3
0.0
-0.3
1.4
0.2
0.8
0.1
-0.1
-1.8
1.1
0.3
1.2
-0.8
1.0
0.4
0.3
1.1
0.0
-0.4
-2.1
-0.4
-1.0
0.5
-0.1
0.7
0.4
18 LOC7453779 protein MODIFIER OF SNC1 1 7453779 POPTR_015G079800v3 3.8 3.6
2.3
2.1
2.0
0.7
0.4
0.7
-0.6
0.4
0.3
1.0
0.6
0.6
0.4
0.1
-0.0
0.1
-1.0
0.7
-0.7
0.3
-0.4
-0.3
-0.5
0.3
0.9
-0.8
0.6
0.4
19 LOC7464686 uncharacterized LOC7464686 7464686 POPTR_005G211400v3 3.8 3.3
2.5
1.8
1.2
-0.2
-1.2
0.8
-0.0
1.4
0.9
0.4
0.0
1.2
0.8
1.5
0.7
0.5
-0.3
0.6
0.5
0.7
-0.0
1.1
0.3
1.2
1.1
-0.5
-0.7
0.4
0.0
1.7
1.6
20 LOC7494117 U11/U12 small nuclear ribonucleoprotein 59 kDa protein 7494117 POPTR_014G091400v3 3.8 2.8
3.0
2.0
1.5
1.2
-0.0
-0.5
-0.0
0.5
-0.3
0.0
1.0
0.0
-1.1
0.4
0.4
-0.7
-0.7
0.2
0.6
21 LOC7480273 protein TIFY 4B 7480273 POPTR_005G214300v3 3.8 2.4
3.3
1.3
0.3
2.0
0.4
1.3
0.2
-0.1
-0.1
0.5
0.1
0.7
-0.6
0.3
0.8
1.8
0.1
-0.7
0.5
0.1
0.9
-0.1
-0.1
-0.4
0.2
-0.5
-0.6
-1.1



22 LOC18101209 protein indeterminate-domain 2 18101209 POPTR_007G028800v3 3.7 4.1

1.7
1.3
0.7
0.6
2.3
1.3
2.2
2.0
1.8
1.8
1.9
0.8
0.4
0.2
0.9
-0.1
-0.4
-1.0
2.4
1.7
0.9
-0.2
3.6
1.3
1.8
0.3
2.1
1.4
-0.2
-1.2
0.0
0.7
0.4
23 LOC7473456 TNF receptor-associated factor homolog 1b 7473456 POPTR_008G163300v3 3.7 3.7

2.0
1.7
-0.2
-0.5
-0.0
-0.7
0.9
0.8
0.1
-0.1
1.3
0.4
0.2
-0.4
-0.6
-1.0
1.2
1.1
0.7
0.2
-0.7
-0.8
0.9
0.0
-0.3
-1.6
0.8
0.8
0.6
0.6
-0.5
0.4
0.3
24 LOC7490627 protein FD 7490627 POPTR_002G018400v3 3.7 3.5

0.9
0.6
1.0
0.8
0.3
-0.1
0.6
-1.3
0.5
0.4
1.6
-1.2



1.4
2.1
1.5
1.0
1.0
0.1
-0.9
-0.3
-0.5
0.4
-1.0
1.2
0.4
1.2
1.1
25 LOC7493988 protein FD 7493988 POPTR_005G243400v3 3.7 3.9

0.9
0.6
1.0
0.8
0.3
-0.1
0.6
-1.3
0.5
0.4
1.6
-1.2



1.4
2.1
1.5
1.0
1.0
0.1
-0.9
-0.3
-0.5
0.4
-1.0
1.2
0.4
1.2
1.1
26 LOC7478492 transcription factor LHW 7478492 POPTR_001G216900v3 3.7 3.8
1.9
1.5
0.8
1.1
-0.0
2.4
-1.3
2.8
2.6
1.6
1.5
3.6
2.5
1.8
0.3
-0.1
-1.2
1.4
0.2
1.5
0.5
1.7
1.4
0.1
2.6
-0.3
0.2
-0.9
0.0
-0.1
0.4
0.2
1.3
0.9
27 LOC7469578 uncharacterized LOC7469578 7469578 POPTR_007G132700v3 3.7 3.3
2.4
1.4
1.0
0.3
0.0
0.8
0.1
1.1
1.0
1.4
0.1
1.1
0.6
0.2
-0.3
-0.2
-0.1
1.1
0.3
1.4
0.3
0.2
-0.2
1.5
0.4
-0.7
-0.9
1.1
-0.4
0.3
0.2
28 LOC7493974 BRISC and BRCA1-A complex member 2 7493974 POPTR_005G240000v3 3.6 3.9
1.8
3.3
0.9
1.5
-0.2
0.4
0.3
0.7
0.0
0.5
-0.9
-0.0
0.5
1.0
-0.3
-0.5
-0.2
-1.5
0.4
-0.5
-0.3
1.5
29 LOC7464667 auxin response factor 6 7464667 POPTR_005G207700v3 3.6 3.5

2.7
1.4
0.8
0.8
2.9
0.1
2.7
1.7
1.3
0.0
2.8
2.6
1.2
0.2
0.8
-0.3
2.1
1.9
3.1
0.4
1.9
-0.3
0.2
0.9
0.6
0.2
2.5
0.8
1.1
0.7
30 LOC7470541 mediator of RNA polymerase II transcription subunit 15a 7470541 POPTR_001G204900v3 3.6 3.4

1.9
1.8
0.6
0.4
1.5
1.4
1.4
0.7
1.3
0.9
2.7
1.0
0.0
-0.2
-0.7
-0.8
1.0
-0.6
0.6
-0.2
-0.1
0.1
-0.5
0.8
-0.8
-0.2
0.0
31 LOC7467225 GATA transcription factor 24 7467225 POPTR_002G110800v3 3.6 3.2
2.4
2.2
1.8
0.4
-0.4
1.0
-0.9
1.7
1.6
1.6
0.1
3.3
0.4
1.3
-1.3
-0.0



-1.9
0.7
-0.3



32 LOC18102616 flowering time control protein FCA 18102616 POPTR_010G147900v3 3.6 3.1

2.8
0.5
0.9
2.1
1.6
1.4
0.8
2.2
2.0
0.7
-0.8
1.3
1.5
0.4
0.3
-0.8
0.5
0.3
-0.3
0.1
1.3
33 LOC7453722 protein FAR-RED ELONGATED HYPOCOTYL 3 7453722 POPTR_016G018300v3 3.6 2.7
2.8
2.2
1.0
0.9
0.1
0.5
-0.1
1.7
1.5
0.7
0.2
2.0
1.7
0.3
-0.9
0.6
0.4
0.3
-0.2
0.1
0.6
1.1



34 LOC7485590 calmodulin-binding protein 60 B 7485590 POPTR_011G043200v3 3.6 4.4
1.1
1.4
1.2
0.7
-0.2
0.5
0.4
1.8
1.2
1.4
0.6
1.0
0.9
1.0
0.8
0.3
-0.2
1.6
0.6
0.6
0.1
1.8
0.7
0.2
-1.0
-0.1
-0.6
-0.1
-0.6
0.4
0.2
-0.2
-0.7
0.4
-0.3
1.7
1.0
35 LOC18096212 SWI/SNF complex subunit SWI3C 18096212 POPTR_002G080600v3 3.6 3.7

2.3
2.2
0.9
-0.1
0.7
0.4
1.7
1.0
2.3
1.2
1.1
0.4
-0.2
-1.2
0.7
1.2
0.3
-0.4
-1.7
1.3
-1.0
0.3
-0.7
0.4
0.3
1.3
0.2
36 LOC7480020 homocysteine S-methyltransferase 2 7480020 POPTR_002G049800v3 3.5 4.4

0.5
-0.4
1.2
0.9
-1.1
-1.4
0.7
-0.8
-0.0
-1.1
0.5
-2.3
0.1
-1.0
0.4
-1.0
0.2
-0.7
0.5
-0.9
1.5
0.4
0.7
0.5
-0.0
-2.0
0.1
-0.8
0.8
0.6
0.7
-0.6
-0.1
-0.8
0.6
0.2
37 LOC18095890 transcription factor ILR3 18095890 POPTR_001G416600v3 3.5 4.1

0.4
0.0
1.2
0.5
1.4
0.3
1.9
1.8
1.5
0.5
1.5
1.0
0.3
0.2
0.5
0.1
2.3
2.1
1.2
1.1
0.5
-1.5
0.8
0.2
2.4
0.6
2.3
0.3
0.1
0.1
-0.4
-0.8
-0.6
-0.7
0.4
0.2
38 LOC7467924 auxin response factor 19 7467924 POPTR_018G063000v3 3.5 2.6
2.8
2.4
0.9
1.9
0.3
1.8
1.1
1.4
0.8
1.9
1.4
1.9
1.0
1.5
0.6
-0.3
-0.6
1.6
0.4
2.1
-0.1
-0.4
-0.7
1.0
-0.2
0.6
1.6
-1.0
0.4
0.6
-0.2
39 LOC7465053 uncharacterized LOC7465053 7465053 POPTR_001G298200v3 3.5 3.6
1.8
0.4
-0.3
-0.0
-0.5
-1.1
-2.4
0.5
0.1
0.6
0.5
0.9
0.5
0.1
-0.7
0.9
-0.6
0.0
0.5
0.3
0.8
-0.6
-0.3
-1.2
0.6
-0.3
-0.1
-0.4
40 LOC7491956 serine/arginine-rich splicing factor RS2Z33 7491956 POPTR_006G215200v3 3.5 4.5

2.7
1.4
1.6
0.9
1.9
1.3
2.1
1.8
0.7
-0.1
0.8
0.6
-1.5
0.4
1.5
0.4
-0.3
1.3
1.1
0.1
-0.3
0.7
-0.6
1.2
0.3
-0.1
-0.5
0.4
0.3
0.3
-0.1
2.4
1.2
41 LOC7469774 floral homeotic protein APETALA 2 7469774 POPTR_008G045300v3 3.5 2.1
3.2
3.3
2.5
4.5
2.3
4.7
3.3
8.8
4.3
7.7
4.8
8.8
6.8
4.9
1.0
2.3
1.0
6.6
0.8
3.6
1.9
3.1
1.9
3.6
3.1
3.3
2.8
3.3
2.4
2.8
0.4
-0.1
-0.4
1.9
1.9
4.9
2.1
42 LOC7473286 F-box protein At1g55000 7473286 POPTR_013G021600v3 3.5 4.1
1.2
0.1
-0.4
-0.9
0.4
-0.7
1.4
0.9
0.2
-1.3
0.0
0.7
0.2
-0.5
-0.8
0.2
0.2
1.0
-0.2
-1.1
-0.4
-0.4
43 LOC7492034 probable mediator of RNA polymerase II transcription subunit 26c 7492034 POPTR_001G307600v3 3.5 3.9

1.2
0.5
-0.4
-1.4
0.5
-1.0
1.3
1.3
0.9
0.8
1.3
1.1
-1.2
1.2
1.7
4.0
0.0
2.5
0.1
1.3
-0.3
0.3
-0.5
1.1
1.0
1.1
0.4
44 LOC7481453 nodulin homeobox 7481453 POPTR_002G213400v3 3.5 2.8
2.5
3.4
3.0
1.9
0.4
2.6
0.9
0.0
-0.7
-0.6
-0.8
-0.8
-1.8
0.1
-0.1
0.0
-0.6
1.0
1.0
-0.8
0.6
0.3
0.0
-0.8
-0.3
-0.8
1.2
0.9
45 LOC7467863 ubinuclein-1 7467863 POPTR_002G078800v3 3.5 3.1

2.1
1.9
1.0
0.0
1.3
1.2
1.1
0.9
0.9
0.7
2.3
1.2
0.1
-0.7
-0.1
-0.8
0.6
0.3
0.9
0.7
1.1
-0.2
0.5
0.2
-0.1
0.4
0.1
-0.0
-0.2
0.7
0.7
2.2
-0.7
46 LOC7465430 protein RRC1 7465430 POPTR_018G017200v3 3.4 4.1

2.8
1.9
0.3
-0.6
1.1
0.2
0.5
0.3
-0.7
-0.9
-0.5
-1.0
-0.1
-1.7
1.1
-0.3
-1.0
0.7
-0.2
0.2
-0.9
-0.4
-1.1
0.6
-0.3
0.0
1.8
47 LOC7492939 zinc-finger homeodomain protein 11 7492939 POPTR_010G169400v3 3.4 1.9
3.5
0.4
0.0
4.8
3.6
0.6
0.4
1.9
1.7
1.0
1.0
1.4
0.6
0.1
-0.1
1.0
-0.1
2.8
1.5
3.1
2.2
1.5
1.3
2.4
2.2
1.5
1.4
0.8
0.1
1.0
0.7
1.4
1.0
1.6
0.7
1.3
0.7
48 LOC7461697 autophagy-related protein 13b 7461697 POPTR_001G309800v3 3.4 2.8
2.5
0.9
0.5
0.1
-0.1
-0.4
-0.6
1.6
-0.4
1.4
0.1
1.9
0.2
0.1
-0.8
-0.2
-0.4
1.0
-0.3
-0.6
-0.0
0.5



-1.6
0.1
1.1
49 LOC7468462 3-phosphoinositide-dependent protein kinase 2 7468462 POPTR_010G232800v3 3.4 3.8
1.5
2.7
1.3
0.7
-0.1
2.4
1.8
0.3
-0.2
0.0
0.0
0.7
-0.5
-0.5
-0.1
0.1
1.5
0.9
-0.2
-1.2
1.5
0.0
1.2
-0.1
0.9
-2.1
1.5
1.2
-0.7
0.6
0.6
50 LOC7469776 regulator of nonsense transcripts UPF2 7469776 POPTR_008G045400v3 3.4 3.3

2.5
2.3
0.8
0.6
1.4
1.3
1.0
-0.1
1.4
0.4
3.5
0.7
0.3
-1.0
1.5
0.1
-0.4
-0.3
0.5
-0.0
1.7
-0.6
0.2
0.5
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