Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4   7472122   synaptotagmin-2 
 ppo-r.3   7472122   synaptotagmin-2 
 ppo-u.4   7463439   synaptotagmin-3 
 ppo-u.4   7490635   synaptotagmin-2 
 gma-u.4   100819310   synaptotagmin-3 
 gma-u.4   100803978   synaptotagmin-2 
 mtr-u.4   11422973   synaptotagmin-3 
 mtr-u.4   11414595   synaptotagmin-2 
 mtr-u.4   11442815   synaptotagmin-1 
 ath-u.4   SYTA   synaptotagmin A 
 ath-u.4   SYTC   Calcium-dependent lipid-binding (CaLB domain) family protein 
 sly-u.4   101245487   synaptotagmin-3 
 sly-u.4   101264564   synaptotagmin-1 
 sly-u.4   101249535   synaptotagmin-1 
 osa-u.4   9268561   synaptotagmin-2 
 osa-u.4   4341880   synaptotagmin-3 
 osa-u.4   4347715   synaptotagmin-2 

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Top 50 coexpressed genes to 7472122 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop4145   Phagosome  5 106 5.51
 pop1250   Biosynthesis of nucleotide sugars  4 104 4.15
 pop520   Amino sugar and nucleotide sugar metabolism  4 151 3.52
 pop190   Oxidative phosphorylation  4 157 3.46
 pop4146   Peroxisome  3 112 2.76

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ppo:LOC7472122 (synaptotagmin-2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.4
for
7472122
ppo-r.3
for
7472122
ppo-u.4
for
7463439
ppo-u.4
for
7490635
gma-u.4
for
100819310
gma-u.4
for
100803978
mtr-u.4
for
11422973
mtr-u.4
for
11414595
mtr-u.4
for
11442815
ath-u.4
for
SYTA
ath-u.4
for
SYTC
sly-u.4
for
101245487
sly-u.4
for
101264564
sly-u.4
for
101249535
osa-u.4
for
9268561
osa-u.4
for
4341880
osa-u.4
for
4347715
1 LOC7469986 ras-related protein Rab7 7469986 POPTR_004G153400v3 6.3 7.1
 0.4
-0.3
 0.5
0.2
 2.9
2.1
 2.3
2.3
 1.0
0.9
 0.4
0.4
 4.3
3.2
 2.4
1.4
 0.3
-0.3
 0.8
-0.7
 2.7
1.6
 1.3
0.5
 0.5
-0.3
 -0.2
-0.4
 1.6
1.3
2 LOC7478132 uncharacterized LOC7478132 7478132 POPTR_003G021800v3 5.3 6.4
 0.4
-0.3
 0.0
-0.0
 1.5
1.3
 2.6
2.4
 1.9
0.4
 -1.3
-1.4
 3.1
1.0
 0.5
0.3
 0.2
0.0
 -1.0
-1.2
 0.6
0.4
 0.7
-0.1
 0.1
-0.3
 1.0
0.4
 1.7
0.6
3 LOC7491099 probable UDP-arabinopyranose mutase 5 7491099 POPTR_019G051700v3 5.2 5.6
 0.3
-0.8
 -0.1
-0.3
 -0.3
 0.8
 -0.2
 -1.1
 1.9
 -0.2
 -1.0
 -0.3
 1.8
 0.2
 0.2
 -0.7
 1.8
4 LOC7493944 V-type proton ATPase 16 kDa proteolipid subunit 7493944 POPTR_005G235300v3 4.9 5.6
 0.1
0.0
 0.1
0.1
 1.8
1.6
 3.4
2.0
 0.1
-0.1
 1.1
-0.1
 2.6
2.2
 3.5
3.2
 0.1
-0.1
 0.4
-0.2
 1.9
1.0
 1.9
0.3
 0.3
-0.1
 1.7
0.0
 1.3
1.2
5 LOC7469664 uncharacterized protein At3g49720 7469664 POPTR_009G082400v3 4.7 5.0
 0.6
0.2
 0.3
-0.4
 1.4
0.4
 3.3
2.9
 -0.3
-0.4
 -0.5
-0.6
 3.0
2.3
 0.3
0.0
 -0.8
-0.9
 1.3
0.2
 2.1
1.8
 2.4
1.1
 -0.3
 -0.8
 -0.9
6 LOC7497778 V-type proton ATPase catalytic subunit A 7497778 POPTR_008G005000v3 4.6 5.3
 0.9
-0.4
 1.1
0.6
 -0.2
-0.2
 2.3
1.4
 0.4
 -0.5
 3.8
 5.5
 -0.1
 0.4
0.0
 2.0
-1.3
 1.0
0.2
 0.8
0.6
 0.3
-0.5
 2.3
1.2
7 LOC7453919 GTP-binding protein YPTM2 7453919 POPTR_002G138400v3 4.6 5.0
 0.4
0.3
 1.1
0.9
 2.9
0.9
 3.6
3.2
 0.5
0.2
 0.6
-0.1
 3.6
2.0
 1.6
1.3
 0.3
-0.8
 0.7
0.4
 2.6
2.4
 1.2
0.9
 0.5
0.2
 0.7
0.5
 1.6
0.8
8 LOC18106487 isocitrate dehydrogenase [NADP] 18106487 POPTR_017G144500v3 4.6 5.0
 1.0
0.9
 1.2
0.8
 0.7
0.7
 2.2
1.5
 2.2
0.5
 1.5
0.4
 3.4
2.3
 2.8
1.5
 1.4
0.4
 0.4
0.4
 1.3
0.8
 1.6
0.9
 1.3
0.2
 0.9
-0.1
 1.7
1.3
9 LOC18098589 uncharacterized LOC18098589 18098589 POPTR_005G017400v3 4.6 4.8
 1.0
-0.6
 -0.0
-0.1
 1.0
0.2
 0.4
0.1
 0.7
0.5
 1.9
0.5
 2.4
0.6
 0.5
 -2.7
 0.1
 3.0
 2.3
 0.2
 -0.2
 0.2
10 LOC112325627 isocitrate dehydrogenase [NADP] 112325627 POPTR_T059000v3 4.5 4.9
 1.0
0.9
 1.2
0.8
 0.7
0.7
 2.2
1.5
 2.2
0.5
 1.5
0.4
 3.4
2.3
 2.8
1.5
 1.4
0.4
 0.4
0.4
 1.3
0.8
 1.6
0.9
 1.3
0.2
 0.9
-0.1
 1.7
1.3
11 LOC7482291 plant UBX domain-containing protein 1 7482291 POPTR_009G059300v3 4.5 5.0
 0.5
-0.3
 0.5
0.1
 -0.1
-0.5
 1.9
0.9
 0.5
 0.3
 1.7
 0.6
 0.3
 -0.9
 -0.4
 -0.8
 0.6
 -0.3
 2.0
12 LOC7454461 probable fructokinase-7 7454461 POPTR_015G134900v3 4.5 5.3
 1.2
-1.3
 0.2
-0.7
 1.8
0.7
 1.5
0.7
 2.2
0.9
 -1.3
-2.6
 0.7
-0.6
 0.3
 -0.5
 1.6
-0.2
 0.5
-0.9
 1.2
-0.4


13 LOC7490522 protein bem46 7490522 POPTR_018G064800v3 4.4 4.7
 0.3
-0.3
 0.4
0.2
 1.1
0.5
 0.4
-0.8
 0.2
 -1.8
 2.4
 0.6
 -0.2
 -0.6
 1.7
 -0.4
 1.4
 -1.1
 1.7
14 LOC7476423 mitochondrial outer membrane protein porin 2 7476423 POPTR_005G146800v3 4.4 4.8
 1.2
0.4
 0.2
0.2
 1.7
1.2
 1.3
1.2
 -0.9
 -0.5
 2.1
 0.3
 -0.3
 0.5
-0.8
 3.0
1.2
 0.1
-1.4
 0.3
 0.5
 1.3
15 LOC7460522 3-ketoacyl-CoA thiolase 2, peroxisomal 7460522 POPTR_001G051900v3 4.4 4.8
 0.7
0.6
 1.8
0.1
 0.9
-0.1
 1.4
1.1
 0.4
0.2
 -1.1
-1.5
 0.9
0.9
 1.8
1.2
 1.2
-0.3
 1.7
-0.4
 1.4
1.1
 0.4
-0.2
 0.2
0.0
 0.1
-1.0
 1.1
0.4
16 LOC7465230 Golgi apparatus membrane protein-like protein ECHIDNA 7465230 POPTR_013G006200v3 4.3 4.6
 0.7
-0.7
 0.4
0.2
 0.7
 3.0
 1.4
 -0.4
 2.9
 -1.1
 -1.0
 -0.0
 1.2
 0.1
 0.9
-0.3
 -0.6
-0.9
 2.6
0.5
17 LOC18107118 V-type proton ATPase subunit C 18107118 POPTR_017G061100v3 4.3 4.6
 1.2
0.8
 0.7
0.2
 1.3
1.1
 2.3
1.4
 -0.4
 0.8
 4.0
 3.0
 -1.2
 -0.3
 2.8
 -0.5
 1.8
 -0.4
 2.6
18 LOC18108295 TOM1-like protein 1 18108295 POPTR_019G050000v3 4.2 4.4
 0.7
-0.2
 0.0
-0.2
 -0.4
 -0.2
 1.8
 0.5
 2.4
 1.1
 0.0
 0.4
 3.4
 -0.2
 0.5
-0.5
 -0.3
-1.1
 0.5
0.4
19 LOC18109068 TOM1-like protein 1 18109068 4.2 4.4














20 LOC7461843 XIAP-associated factor 1 7461843 POPTR_002G109800v3 4.2 5.0
 0.2
 -0.8
 1.4
1.1
 2.1
0.9
 0.6
0.2
 0.5
0.0
 0.8
0.4
 1.6
 1.0
 1.2
0.0
 -0.2
-1.6
 -0.3
-0.5
 1.3
0.8
 -0.3
-0.4
 2.2
0.7
21 LOC7472128 26S proteasome non-ATPase regulatory subunit 4 homolog 7472128 POPTR_009G133000v3 4.2 4.5
 0.8
0.6
 1.5
0.9
 1.2
0.7
 1.5
1.4
 0.9
0.8
 0.2
-0.3
 1.8
1.6
 3.6
 0.2
 -0.6
 1.8
 1.5
 -0.1
 -1.3
 1.2
22 LOC7490310 transcription initiation factor IIA subunit 2 7490310 POPTR_005G151700v3 4.2 4.5
 -1.3
 0.2
 0.9
0.1
 2.2
1.2
 0.4
 0.5
 2.8
 -0.2
 0.1
 -0.7
 0.9
 0.1
 1.2
 0.5
-1.1
 1.2
0.6
23 LOC7465837 plant UBX domain-containing protein 8 7465837 POPTR_003G122300v3 4.1 4.6
 1.8
1.5
 -0.0
-0.2
 -0.2
-0.2
 1.7
0.5
 0.6
 -1.0
 2.4
 2.0
1.9
 1.8
1.2
 -0.2
 0.5
 -0.4
 1.6
1.4
 0.7
0.2
 0.9
0.8
24 LOC18102082 cysteine-rich and transmembrane domain-containing protein WIH2 18102082 POPTR_009G086900v3 4.1 4.3
 0.4
 -0.3
 1.3
0.8
 0.9
0.1










25 LOC7459113 uncharacterized LOC7459113 7459113 POPTR_001G378000v3 4.0 4.4
 1.0
-0.4
 -0.0
-0.3
 1.0
-0.0
 2.5
1.8
 1.4
 -0.6
 1.2
 1.1
-0.1
 1.7
1.1
 0.3
 0.2
 -0.4
 1.3
0.4
 0.8
-0.6
 0.7
-0.2
26 LOC7494019 synaptotagmin-4 7494019 POPTR_002G150700v3 4.0 4.3
 -1.0
 1.6
 1.7
1.1
 0.7
0.4
 0.6
-0.3
 2.5
-1.0
 4.1
1.5
 7.5
 0.9
 -0.0
-0.3
 4.6
-0.0
 1.0
-0.6
 0.8
 -0.1
 0.8
27 LOC18095912 polyubiquitin 18095912 POPTR_001G418500v3 4.0 4.3
 -0.1
-0.2
 1.1
0.5
 0.8
0.6
 1.8
1.0
 1.8
1.1
 2.0
0.9
 2.1
1.0
 1.0
1.0
 0.9
0.6
 0.8
-0.1
 0.8
0.4
 -0.9
-1.0
 -0.1
-0.4
 0.4
0.3
 0.7
0.1
28 LOC18106376 guanosine nucleotide diphosphate dissociation inhibitor 2 18106376 POPTR_017G001200v3 4.0 4.2
 1.3
-0.1
 0.5
0.3
 0.8
-0.8
 1.2
0.6
 1.0
 1.4
 6.2
 2.3
1.4
 -1.2
-1.4
 1.4
0.3
 5.2
3.9
 0.2
-0.3
 2.0
0.8
 -0.6
-0.9
 2.8
2.2
29 LOC7491076 F-box/kelch-repeat protein At5g60570 7491076 POPTR_019G042100v3 4.0 4.4
 0.6
0.5
 0.0
-0.2
 1.2
0.8
 0.9
0.8
 1.8
 0.4
 1.5
 0.1
 -1.7


-0.3
 -0.1
 -0.5
30 LOC7456307 thioredoxin-like protein YLS8 7456307 POPTR_007G072700v3 4.0 4.0
 -1.4
 -0.3
 0.8
0.1
 -0.0
-0.8
 0.4
0.1
 -0.0
-0.3
 3.0
0.9
 2.8
 0.3
 -0.2
-2.4
 0.7
-0.0
 0.7
-0.7
 0.2
-0.6
 -0.3
-0.3
 0.7
-0.5
31 LOC7469113 F-box/kelch-repeat protein At1g22040 7469113 POPTR_005G170000v3 4.0 5.2
 0.7
0.7
 0.5
-1.0
 1.7
0.9
 1.5
1.3
 0.8
-0.4
 1.3
-0.4
 1.3
-0.6
 -0.0
 -0.2
 1.1
 1.1
 -1.2
 -0.0
-1.5
 1.0
0.2
 0.3
-1.0
32 LOC18095273 SH3 domain-containing protein 3 18095273 POPTR_001G354700v3 4.0 4.2
 0.7
-0.6
 0.8
0.4
 1.0
0.9
 0.3
0.3
 -0.7
 0.5
 3.2
 3.5
 -0.2
 -1.9
 0.1
 0.1
 -0.2
 -0.8
 0.2
33 LOC7475903 glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a 7475903 POPTR_010G011900v3 4.0 4.4
 1.1
0.7
 0.8
0.1
 0.8
0.1
 1.3
0.5
 1.2
0.8
 0.9
-0.8
 3.6
1.2
 0.4
 -0.8
 1.0
-0.2
 2.3
-0.4
 0.5
-1.3
 1.5
0.6
 -1.1
-1.4
 1.3
0.7
34 LOC18108306 probable UDP-arabinopyranose mutase 5 18108306 POPTR_T057300v3 3.9 4.2
 0.3
-0.8
 -0.1
-0.3
 -0.3
 0.8
 -0.2
 -1.1
 1.9
 -0.2
 -1.0
 -0.3
 1.8
 0.2
 0.2
 -0.7
 1.8
35 LOC18095775 gamma-soluble NSF attachment protein 18095775 POPTR_001G440600v3 3.9 4.2
 0.6
-0.9
 -0.1
-0.6
 -0.6
-1.7
 1.9
-0.2
 2.1
1.4
 0.1
-0.7
 1.4
0.9
 2.6
 0.4
 -0.3
 1.5
 -0.0
 2.1
 -0.6
 2.4
36 LOC7462943 proteasome subunit beta type-4 7462943 POPTR_018G037700v3 3.9 4.0
 0.3
-0.6
 0.7
0.3
 -0.1
-1.1
 2.1
0.8
 1.1
0.7
 -0.4
-1.2
 2.5
2.4
 2.5
 -0.1
 -0.9
 1.9
 0.4
 0.1
 -1.4
 0.6
37 LOC7455215 ER membrane protein complex subunit 10 7455215 POPTR_019G055100v3 3.9 4.1
 -0.1
 0.6
 -0.4
-1.5
 0.8
0.7
 0.6
 -1.6
 3.9
 1.8
 -0.3
 -1.0
 1.8
 0.3
 0.4
 -0.7
 1.5
38 LOC7478939 E3 ubiquitin-protein ligase RFI2 7478939 POPTR_013G015600v3 3.9 4.1
 1.0
0.1
 0.4
0.3
 0.4
-0.1
 0.8
0.7
 0.5
0.5
 1.9
-1.3
 2.4
1.9
 2.5
 0.4
 -1.4
 0.0
 -1.3
 0.8
0.5
 1.0
0.6
 2.0
-0.1
39 LOC7475124 ESCRT-related protein CHMP1B 7475124 POPTR_001G194400v3 3.9 4.2
 -0.9
-1.2
 0.4
-0.0
 0.5
-0.4
 1.4
1.0
 0.2
 0.9
 2.1
 1.1
0.8
 0.5
0.3
 1.0
-0.3
 4.4
2.7
 0.3
-0.7
 -0.1
 -0.4
 -0.1
40 LOC7485132 calcineurin B-like protein 2 7485132 POPTR_001G371700v3 3.9 4.3
 1.7
1.0
 0.3
-0.3
 2.6
2.0
 1.0
0.7
 0.6
0.0
 1.1
0.7
 4.5
0.9
 1.6
1.1
 0.5
-0.0
 0.3
-1.6
 1.5
1.5
 0.9
0.6
 1.2
0.8
 1.5
-0.8
 2.4
1.0
41 LOC7477801 GTP-binding protein YPTM2 7477801 POPTR_001G080400v3 3.9 4.1
 0.4
0.3
 1.1
0.9
 2.9
0.9
 3.6
3.2
 0.5
0.2
 0.6
-0.1
 3.6
2.0
 1.6
1.3
 0.3
-0.8
 0.7
0.4
 2.6
2.4
 1.2
0.9
 0.5
0.2
 0.7
0.5
 1.6
0.8
42 LOC7467986 signal recognition particle 54 kDa protein 2 7467986 POPTR_001G253500v3 3.9 4.0
 1.7
0.6
 0.2
-0.1
 1.5
0.8
 0.6
0.3
 1.4
0.9
 -1.0
-1.1
 3.9
2.1
 3.4
-0.8
 1.4
0.7
 0.2
-0.8
 4.1
1.3
 0.5
0.4
 -0.2
-0.7
 -0.3
-0.7
 1.6
0.3
43 LOC7494271 putative ER lumen protein-retaining receptor C28H8.4 7494271 POPTR_009G128900v3 3.9 3.9
 0.9
-0.4
 0.5
0.5
 2.2
0.8
 2.2
1.7
 1.4
0.8
 -0.3
-0.8
 3.2
-0.3
 0.3
-0.1
 0.5
0.4
 0.9
-0.0
 0.7
0.7
 1.0
-0.2
 0.4
0.4
 -0.7
-1.1
 1.0
0.2
44 LOC18096922 ras-related protein RABH1b 18096922 POPTR_003G086700v3 3.8 4.0
 1.1
0.0
 0.3
-0.1
 2.0
2.0
 1.8
1.6
 0.1
-0.0
 -0.1
-0.5
 3.5
1.9
 0.1
0.0
 1.0
-1.3
 0.9
0.7
 2.3
1.1
 1.6
0.2
 0.2
-0.0
 -0.1
-0.7
 1.2
-0.1
45 LOC7459085 protein NRT1/ PTR FAMILY 8.3 7459085 POPTR_010G100200v3 3.8 4.6
 1.5
0.6
 -0.6
-0.9
 0.6
0.0
 1.0
-0.8
 1.7
0.3
 2.2
1.7
 1.6
0.8
 1.9
 0.6
 0.5
0.3
 1.0
0.7
 0.5
-1.1
 0.8
0.6
 0.2
-0.3
 0.5
0.0
46 LOC18099847 zinc finger A20 and AN1 domain-containing stress-associated protein 8 18099847 POPTR_006G056500v3 3.8 4.1
 0.5
-0.6
 0.2
-1.1
 1.1
0.7
 1.1
1.0
 0.8
-0.0
 0.6
0.5
 0.9
0.5
 -0.2
 0.0
 -0.1
-0.5
 1.4
0.8
 0.0
-0.2
 -0.2
-0.5
 -0.4
-0.5
 0.5
0.2
47 LOC18094083 MOB kinase activator-like 1B 18094083 POPTR_001G132700v3 3.8 4.0
 0.4
-0.7
 0.1
0.1
 -0.0
-0.7
 1.2
0.3
 0.9
-0.6
 1.0
-0.4
 2.3
-1.2
 -0.3
-1.1
 0.3
-0.6
 1.2
1.1
 1.8
0.1
 0.6
0.3
 1.5
0.4
 2.0
1.7
 1.6
0.9
48 LOC7467083 UDP-glucose 4-epimerase GEPI48 7467083 POPTR_001G090700v3 3.8 4.1
 1.0
0.6
 0.6
-0.2
 0.1
-0.2
 2.6
2.4
 2.1
0.7
 1.0
-0.7
 0.1
-0.1
 1.0
0.2
 1.8
0.4
 1.2
0.7
 1.1
1.0
 2.4
-0.4
 1.0
0.6
 0.8
0.6
 1.4
1.4
49 LOC7455516 V-type proton ATPase catalytic subunit A 7455516 POPTR_010G253500v3 3.8 4.5
 0.9
-0.4
 1.1
0.6
 -0.2
-0.2
 2.3
1.4
 0.4
 -0.5
 3.8
 5.5
 -0.1
 0.4
0.0
 2.0
-1.3
 1.0
0.2
 0.8
0.6
 0.3
-0.5
 2.3
1.2
50 LOC7494300 protein FMP32, mitochondrial 7494300 POPTR_009G123700v3 3.8 4.2
 0.4
 -0.3
 1.9
0.5
 0.7
0.3
 0.5
-0.0
 1.8
-0.2
 1.2
0.9
 -0.7
 -0.5
 0.5
-0.1
 0.4
0.1
 0.2
-0.9
 -0.1
 1.4
 0.0
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