Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4   7486609   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ppo-r.3   7486609   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ppo-m.4   7486609   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 gma-u.4   100797114   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 gma-u.4   100782309   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 gma-u.4   100781612   endoplasmic reticulum-Golgi intermediate compartment protein 3-like 
 mtr-u.4   25493279   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 mtr-u.4   11436099   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ath-u.4   AT1G22200   Endoplasmic reticulum vesicle transporter protein 
 ath-u.4   AT1G36050   Endoplasmic reticulum vesicle transporter protein 
 sly-u.4   101248429   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 sly-u.4   101249351   endoplasmic reticulum-Golgi intermediate compartment protein 3-like 
 osa-u.4   4336024   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 osa-u.4   4332678   endoplasmic reticulum-Golgi intermediate compartment protein 3 

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Top 50 coexpressed genes to 7486609 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop1200   Carbon metabolism  6 322 4.22
 pop20   Citrate cycle (TCA cycle)  5 71 6.38
 pop4145   Phagosome  5 106 5.51
 pop190   Oxidative phosphorylation  4 157 3.46
 pop4141   Protein processing in endoplasmic reticulum  4 262 2.63

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ppo:LOC7486609 (endoplasmic reticulum-Golgi intermediate compartment protein 3) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.4
for
7486609
ppo-r.3
for
7486609
ppo-m.4
for
7486609
gma-u.4
for
100797114
gma-u.4
for
100782309
gma-u.4
for
100781612
mtr-u.4
for
25493279
mtr-u.4
for
11436099
ath-u.4
for
AT1G22200
ath-u.4
for
AT1G36050
sly-u.4
for
101248429
sly-u.4
for
101249351
osa-u.4
for
4336024
osa-u.4
for
4332678
1 LOC7461819 AP-4 complex subunit mu 7461819 POPTR_002G105100v3 7.2 4.5
 6.5
 1.6
1.5
 2.7
2.0
 1.3
1.1
 2.4
2.2
 2.5
1.7
 3.0
 3.9
 3.4
 1.6
 3.8
 6.4
2 LOC7455712 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 7455712 POPTR_014G195700v3 6.3 3.0
 6.7
 2.3
1.7
 3.2
1.2
 5.9
4.9
 3.2
 1.5
 3.7
 0.3
 2.6
 2.5
 3.0
 1.7
3 LOC7464542 PP2A regulatory subunit TAP46 7464542 POPTR_015G012200v3 6.0 4.0
 5.2
 2.2
1.3
 2.2
1.7
 2.8
0.9
 1.1
 1.3
 2.6
 0.7
 2.3
 3.4
 0.3
0.2
 1.8
1.5
4 LOC7463094 uncharacterized LOC7463094 7463094 POPTR_015G090300v3 5.9 3.3
 5.8
 2.9
2.1
 2.4
2.1
 1.4
0.8
 2.2
0.9
 3.3
1.5
 3.3
2.8
 2.8
1.9
 3.6
 3.0
 1.3
 5.1
5 LOC7455618 rhomboid-like protein 15 7455618 POPTR_006G197900v3 5.8 4.5
 4.5
 3.3
1.6
 1.5
0.5
 -0.4
-0.6
 0.6
 3.6
 2.7
 1.7
 1.4
 1.0
 2.2
 2.4
6 LOC18096722 ubiquitin carboxyl-terminal hydrolase 7 18096722 POPTR_003G033700v3 5.8 6.5
3.4
2.5
 4.0
3.5
 6.5
5.1
 4.0
 2.4
 2.9
0.9
 1.4
0.7
 3.7
 3.7
 2.8
 2.6
7 LOC7481207 sphingosine-1-phosphate lyase 7481207 POPTR_003G168800v3 5.7 3.1
 5.6
 0.9
-0.3
 0.9
-0.7
 0.5
-0.3
 2.5
 0.2
 1.2
 2.2
 0.7
 1.5
 -0.1
 0.2
8 LOC7469805 ras-related protein RABE1c 7469805 POPTR_008G051700v3 5.6 6.3
2.7
2.1
 2.4
2.3
 4.4
3.8
 3.4
2.9
 4.1
3.4
 2.4
2.2
 4.8
3.5
 6.8
2.9
 7.9
4.2
 2.2
1.1
 3.5
2.3
9 LOC7466912 GDT1-like protein 4 7466912 POPTR_010G128400v3 5.5 5.1
 3.4
 3.1
1.0
 1.7
1.3
 1.7
0.5
 1.3
 3.0
 3.0
0.8
 1.4
0.1
 2.2
 3.0
 0.5
 1.3
10 LOC7487729 V-type proton ATPase subunit E 7487729 POPTR_013G051500v3 5.5 3.9
 4.5
 0.8
0.7
 3.4
1.3
 1.9
0.6
 1.5
0.9
 1.6
-0.6
 1.2
0.4
 1.9
0.2
 0.6
-0.0
 2.2
0.6
 1.2
0.1
 2.4
2.1
11 LOC7469990 phenylalanine--tRNA ligase alpha subunit, cytoplasmic 7469990 POPTR_004G155000v3 5.4 3.8
 4.5
 1.9
0.8
 1.6
1.0
 1.5
0.9
 2.3
 2.6
 2.1
 -0.1
 3.2
2.8
 2.5
1.3
 2.3
 3.1
12 LOC7466251 uncharacterized LOC7466251 7466251 POPTR_016G134700v3 5.4 4.2
 4.0
 3.2
0.9
 2.7
1.5
 4.2
1.0
 1.3
 2.8
 2.0
 3.7
 2.9
 1.1
 2.5
 3.8
13 LOC7495957 V-type proton ATPase subunit d2 7495957 POPTR_017G079200v3 5.3 4.7
 3.3
 2.6
1.3
 3.1
2.2
 4.6
2.6
 1.4
0.5
 2.9
0.2
 2.7
2.5
 3.5
2.7
 1.6
 2.8
 2.6
 2.9
14 LOC7496644 glucose-6-phosphate 1-dehydrogenase, cytoplasmic 7496644 POPTR_017G070200v3 5.2 3.6
 4.5
 0.9
-0.3
 0.7
0.7
 2.2
2.0
 3.0
1.0
 0.2
-0.3
 2.0
1.2
 0.6
0.2
 2.1
 1.9
 0.5
-1.2
 0.7
-0.2
15 LOC7487804 fumarate hydratase 1, mitochondrial 7487804 POPTR_002G201300v3 5.2 3.7
 4.3
 1.1
0.3
 1.1
1.0
 3.2
2.3
 2.3
 1.3
 3.3
-0.2
 3.6
0.4
 2.5
-0.9
 3.2
-0.3
 2.2
 2.7
16 LOC7480810 dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial 7480810 POPTR_003G043900v3 5.2 4.0
 4.0
 1.7
0.8
 1.5
1.0
 4.2
3.1
 3.0
 1.3
 0.8
-1.0
 1.3
-1.2
 2.4
 1.5
 2.8
2.8
 2.6
2.5
17 LOC7475907 protein pleiotropic regulatory locus 1 7475907 POPTR_010G012800v3 5.1 4.4
 3.5
 1.0
0.8
 1.3
1.2
 4.6
3.9
 2.9
 2.2
 0.3
-0.5
 -0.8
-0.9
 1.0
 2.7
 2.7
 3.4
18 LOC7491175 protein disulfide-isomerase 5-1 7491175 POPTR_009G004500v3 5.1 3.7
 4.1
 1.5
1.4
 2.0
1.9
 2.4
0.5
 1.7
 4.0
 4.6
 3.6
 2.9
 4.6
 1.0
 4.1
19 LOC7484903 calnexin homolog 7484903 POPTR_012G111100v3 5.1 2.3
 5.5
 0.6
0.1
 1.8
1.7
 1.5
1.4
 2.0
1.3
 0.9
-0.3
 1.5
0.4
 0.2
0.1
 0.5
 0.0
 1.7
 3.7
20 LOC7463686 putative MO25-like protein At5g47540 7463686 POPTR_006G014800v3 5.0 3.0
 4.7
 2.1
1.8
 1.8
0.7
 0.8
0.2
 2.1
1.8
 2.1
1.8
 2.8
2.3
 3.8
2.7
 1.4
0.4
 1.7
1.1
 -0.1
 2.6
21 LOC7467622 citrate synthase, glyoxysomal 7467622 POPTR_016G089300v3 4.9 3.4
 4.2
 1.9
1.7
 1.4
0.8
 1.4
0.7
 1.4
0.1
 1.7
1.5
 0.3
0.2
 3.1
0.1
 1.3
0.5
 1.0
-0.6
 0.4
 -0.1
22 LOC7469664 uncharacterized protein At3g49720 7469664 POPTR_009G082400v3 4.9 2.8
 4.8
 1.7
1.6
 4.3
2.6
 2.2
1.2
 1.8
1.3
 -0.1
-0.2
 1.7
0.4
 3.2
1.0
 1.1
1.0
 2.4
1.3
 2.6
 2.3
23 LOC7463861 SURP and G-patch domain-containing protein 1-like protein 7463861 POPTR_001G269900v3 4.9 3.1
 4.5
 1.1
0.3
 1.8
1.2
 2.7
1.2
 1.7
1.0
 3.7
0.5
 1.5
 1.2
 -0.0
 0.8
 1.5
 1.1
24 LOC7467617 syntaxin-71 7467617 POPTR_016G088200v3 4.8 4.1
 3.4
 1.1
0.9
 2.0
1.9
 1.7
1.0
 1.0
-0.4
 2.3
1.6
 2.8
 3.9
 1.3
-0.5
 1.6
1.1
 0.0
 2.2
25 LOC7462934 ER membrane protein complex subunit 1 7462934 POPTR_018G039800v3 4.8 2.6
 4.8
 2.5
0.0
 1.5
0.4
 2.6
0.8
 0.8
 2.2
 0.6
 1.4
 2.7
 3.1
 4.7
 4.3
26 LOC7458637 Golgi to ER traffic protein 4 homolog 7458637 POPTR_010G217400v3 4.8 2.9
 4.5
 3.0
1.9
 3.0
2.5
 2.6
1.8
 1.5
 3.0
 5.9
 4.2
 2.6
 1.1
 3.1
 3.0
27 LOC7469094 probable prolyl 4-hydroxylase 4 7469094 POPTR_008G197700v3 4.8 3.1
 4.2
 1.4
0.8
 2.9
1.9
 1.4
1.1
 3.7
1.5
 2.1
1.5
 4.1
0.8
 1.4
0.7
 1.8
0.7
 2.8
1.1

28 LOC7455516 V-type proton ATPase catalytic subunit A 7455516 POPTR_010G253500v3 4.7 4.1
 3.2
 1.1
1.1
 1.4
0.5
 1.6
0.4
 2.6
 0.9
 0.7
 0.8
 0.1
-1.2
 0.5
-0.7
 2.3
1.4
 2.7
1.6
29 LOC7465471 cyclin-dependent kinase F-4 7465471 POPTR_003G101600v3 4.7 3.7
 3.5
 1.7
1.3
 2.7
2.4
 3.0
2.1
 1.7
0.8
 2.6
1.9
 1.8
0.6
 2.8
0.3
 0.5
0.2
 1.4
0.8
 0.9
0.6
 1.4
0.3
30 LOC18103523 obg-like ATPase 1 18103523 POPTR_011G164000v3 4.7 5.1
2.4
1.3
 3.0
2.2
 6.6
3.8
 1.0
 1.9
 1.5
 0.2
 2.1
 1.5
 1.5
 3.1
31 LOC7454354 probable methyltransferase PMT3 7454354 POPTR_005G226000v3 4.7 2.3
 5.0
 2.0
0.7
 2.8
2.3
 1.0
0.9
 0.9
0.8
 0.6
0.0
 3.4
1.2
 3.9
3.8
 1.3
0.1
 2.4
1.3
 0.7
 1.3
32 LOC7476368 syntaxin-61 7476368 POPTR_004G050800v3 4.7 4.0
 3.3
 1.8
1.4
 2.1
0.9
 3.3
0.9
 2.0
1.9
 3.6
2.8
 3.7
 3.1
 2.4
 5.4
 0.6
 1.0
33 LOC7457932 UDP-glucuronic acid decarboxylase 6 7457932 POPTR_008G053100v3 4.7 3.1
 4.1
 3.5
2.1
 3.7
2.1
 1.7
1.6
 1.8
0.1
 1.0
1.0
 1.1
0.9
 2.2
0.8
 0.7
-0.5
 1.1
0.1
 1.4
 1.6
34 LOC7461659 UBX domain-containing protein 1 7461659 POPTR_001G316400v3 4.6 3.5
 3.6
 2.4
0.7
 3.3
1.7
 3.2
1.0
 3.0
 3.7
 0.9
 1.1
 1.5
 1.9
 1.6
 1.8
35 LOC7461228 protein RER1A 7461228 POPTR_004G156900v3 4.6 2.7
 4.4
 1.1
1.0
 2.7
1.7
 2.8
1.9
 2.3
2.0
 3.7
1.6
 3.2
3.0
 2.8
2.6
 2.2
1.1
 3.9
3.2
 3.4
2.0
 3.5
1.9
36 LOC7470725 clathrin interactor EPSIN 1 7470725 POPTR_006G234100v3 4.6 2.6
 4.4
 2.1
1.6
 4.8
3.9
 2.8
2.7
 2.9
 3.3
 1.6
 2.3
 3.4
0.7
 4.2
2.2
 2.7
 3.1
37 LOC7485681 peroxisomal and mitochondrial division factor 2 7485681 POPTR_001G245500v3 4.6 3.3
 3.7
 2.3
1.5
 1.8
1.8
 1.6
1.0
 2.7
 3.3
 3.1
 2.7
 3.8
 3.8
 3.7
 3.3
38 LOC7491038 casein kinase 1-like protein HD16 7491038 POPTR_019G034500v3 4.6 3.1
 3.9
 2.8
1.0
 2.1
1.5
 2.4
2.3
 3.0
2.1
 1.5
1.3
 2.4
2.1
 2.7
1.9
 0.7
0.6
 1.9
0.6
 2.4
2.3
 1.3
1.3
39 LOC7482885 SEC12-like protein 2 7482885 POPTR_008G130300v3 4.6 3.3
 3.7
 1.0
 2.8
 1.1
 3.6
 2.2
 3.5
0.3
 3.1
1.0
 3.2
 2.6
 2.3
 3.8
40 LOC7457682 uncharacterized LOC7457682 7457682 POPTR_001G000900v3 4.6 3.7
 3.3
 3.1
1.1
 2.1
2.0
 2.1
1.2
 3.1
1.0
 2.9
0.9
 2.9
 3.0
 3.7
 2.8
 2.7
2.4
 3.2
2.9
41 LOC7477198 novel plant SNARE 13 7477198 POPTR_010G001900v3 4.5 4.6
 2.4
 1.5
1.2
 1.5
1.2
 2.2
1.8
 2.3
1.8
 4.1
2.1
 1.7
1.0
 3.2
3.2
 0.1
 1.5
 1.5
1.0
 2.1
0.9
42 LOC7456266 small GTPase LIP1 7456266 POPTR_007G080100v3 4.5 3.2
 3.7
 0.3
-1.0
 2.5
2.0
 1.8
0.4
 2.8
 1.8
 1.3
 4.9
 0.2
 1.6
 2.4
1.2
 1.5
0.7
43 LOC7465965 signal recognition particle receptor subunit alpha homolog 7465965 POPTR_006G183600v3 4.5 3.7
 3.2
 1.7
1.2
 2.9
2.3
 2.5
1.0
 2.0
 1.0
 1.8
 1.5
 3.0
 5.8
 1.9
 0.0
44 LOC7457605 ras-related protein RABF2a 7457605 POPTR_015G113000v3 4.5 3.2
 3.6
 2.1
0.4
 1.9
1.6
 4.5
1.5
 3.6
2.7
 3.8
3.6
 2.7
2.5
 1.4
0.9
 1.4
1.1
 2.2
1.8
 2.4
1.5
 1.7
0.8
45 LOC7467418 protein disulfide-isomerase 5-2 7467418 POPTR_019G082400v3 4.4 2.2
 4.6
 1.9
 2.4
 1.9
 1.4
 2.8
 1.9
 2.9
 3.1
1.9
 3.2
2.0
 1.2
0.5
 2.2
1.6
46 LOC7483625 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial 7483625 POPTR_011G089200v3 4.4 2.3
 4.5
 3.0
2.2
 2.6
2.2
 4.4
3.6
 4.2
3.9
 3.6
1.2
 3.7
3.2
 3.0
0.8
 5.1
4.3
 2.8
2.6
 3.5
 2.2
47 LOC7485925 choline/ethanolaminephosphotransferase 1 7485925 POPTR_008G109900v3 4.4 3.6
 3.1
 1.8
1.7
 3.0
2.2
 2.9
2.3
 0.4
0.3
 0.7
0.6
 3.4
2.3
 2.0
0.7
 1.5
1.3
 1.8
0.3
 2.3
1.4
 3.3
0.3
48 LOC7497778 V-type proton ATPase catalytic subunit A 7497778 POPTR_008G005000v3 4.4 4.5
 2.2
 1.1
1.1
 1.4
0.5
 1.6
0.4
 2.6
 0.9
 0.7
 0.8
 0.1
-1.2
 0.5
-0.7
 2.3
1.4
 2.7
1.6
49 LOC112323397 28 kDa heat- and acid-stable phosphoprotein-like 112323397 POPTR_011G061200v3 4.4 4.7
0.7
-0.4
 0.5
-0.5
 1.2
0.0
 2.7
1.8
 3.2
3.1
 1.6
 1.9
 0.9
 2.2
 -0.2
 1.7
50 LOC7465227 ADP-ribosylation factor 7465227 POPTR_013G005500v3 4.3 4.8
2.6
1.0
 2.8
2.4
 2.4
2.0
 2.5
2.5
 4.2
3.8
 1.6
1.5
 1.7
1.4
 3.0
2.4
 5.5
3.9
 2.5
1.5
 3.4
3.3
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