Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-r.3   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-m.4   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-u.4   18098251   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.4   100527058   uncharacterized LOC100527058 
 gma-u.4   100784752   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.4   100815376   superoxide dismutase [Cu-Zn], chloroplastic 
 mtr-u.4   11406426   superoxide dismutase [Cu-Zn], chloroplastic 
 ath-u.4   CSD2   copper/zinc superoxide dismutase 2 
 osa-u.4   4346329   superoxide dismutase [Cu-Zn], chloroplastic-like 

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Top 50 coexpressed genes to 7491174 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop4146   Peroxisome  3 111 2.77
 pop130   Ubiquinone and other terpenoid-quinone biosynthesis  2 49 2.31
 pop900   Terpenoid backbone biosynthesis  2 67 2.05
 pop1240   Biosynthesis of cofactors  3 305 -
 pop3010   Ribosome  4 451 -

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ppo:LOC7491174 (superoxide dismutase [Cu-Zn], chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.4
for
7491174
ppo-r.3
for
7491174
ppo-m.4
for
7491174
ppo-u.4
for
18098251
gma-u.4
for
100527058
gma-u.4
for
100784752
gma-u.4
for
100815376
mtr-u.4
for
11406426
ath-u.4
for
CSD2
osa-u.4
for
4346329
1 LOC18098251 superoxide dismutase [Cu-Zn], chloroplastic 18098251 POPTR_004G216700v3 9.2 11.2
9.2
 4.8
4.0
 17.4
4.0
 17.4
4.8


2 LOC7473899 superoxide dismutase [Cu-Zn] 7473899 POPTR_013G031100v3 7.2 5.0
 6.1
 7.7
7.6
 4.9
1.2
 6.8
4.2
 7.8
4.6
 7.4
 20.6
 5.0
3.3
3 LOC7465821 copper chaperone for superoxide dismutase, chloroplastic/cytosolic 7465821 POPTR_003G118400v3 5.4 3.2
 5.1
 7.0
6.6
 4.6
 5.2
 6.5
 8.3
 23.5
 7.8
4 LOC7463150 delta-aminolevulinic acid dehydratase, chloroplastic 7463150 POPTR_002G082300v3 5.3 3.6
 4.5
 2.1
 1.3
 2.5
 4.3
 2.5
 1.5
 2.0
5 LOC18098883 superoxide dismutase [Cu-Zn] 2 18098883 POPTR_005G044400v3 4.9 5.4
7.7
7.6
 4.9
1.2
 6.8
4.2
 7.8
4.6
 7.4
 20.6
 5.0
3.3
6 LOC7483535 protein CURVATURE THYLAKOID 1C, chloroplastic 7483535 POPTR_003G052200v3 4.4 2.6
 4.3
 0.9
0.3
 1.4
0.3
 2.1
2.0
 4.1
3.1
 2.7
 1.1
 1.5
7 LOC7457377 protein CURVATURE THYLAKOID 1A, chloroplastic 7457377 POPTR_002G166800v3 4.4 2.3
 4.5
 1.5
1.4
 3.3
2.4
 2.5
2.4
 4.1
2.9
 3.2
 1.9
 0.9
0.8
8 LOC18094427 copper chaperone for superoxide dismutase, chloroplastic/cytosolic 18094427 POPTR_001G113800v3 4.3 5.6
7.0
6.6
 4.6
 5.2
 6.5
 8.3
 23.5
 7.8
9 LOC7484701 probable ribose-5-phosphate isomerase 4, chloroplastic 7484701 POPTR_011G155500v3 4.3 2.1
 4.5
 0.4
 2.8
 0.7
 2.1
 2.6
 0.3
10 LOC7478768 soluble inorganic pyrophosphatase 6, chloroplastic 7478768 POPTR_009G081200v3 4.2 2.8
 3.6
 2.1
1.6
 -0.4
-1.0
 1.8
-0.0
 3.0
1.8
 2.9
 2.5
 3.6
11 LOC18095596 thioredoxin 1 18095596 POPTR_001G401500v3 4.1 4.7
2.6
1.1
 0.4
0.3
 1.7
1.1
 4.0
3.7
 2.7
1.9
 2.4
1.9
 3.0
1.8
12 LOC7487763 probable plastid-lipid-associated protein 10, chloroplastic 7487763 POPTR_002G183700v3 4.0 4.2
 1.9
 1.3
 2.3
 1.1
 3.3
 2.0
 0.6
 0.7
13 LOC7474907 cell division protein FtsZ homolog 2-1, chloroplastic 7474907 POPTR_009G164100v3 3.8 3.4
 2.5
 2.8
2.5
 2.9
1.9
 2.0
1.1
 1.7
1.4
 3.2
0.6
 1.1
0.5
 0.6
0.3
14 LOC7469956 2-Cys peroxiredoxin BAS1, chloroplastic 7469956 POPTR_016G072100v3 3.8 2.2
 3.7
 2.7
2.3
 3.6
3.5
 2.9
2.7
 4.3
4.2
 7.2
5.5
 4.0
2.1
 7.3
15 LOC7461671 uncharacterized LOC7461671 7461671 POPTR_001G314100v3 3.8 3.7
 2.1
 2.8
 0.6
0.4
 1.0
0.8
 1.4
0.6
1.1
 1.3
16 LOC7495788 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal 7495788 POPTR_001G329900v3 3.8 0.8
 5.0
 0.2
 3.0
2.0
 1.3
0.4
 1.4
1.3
 1.8
 1.3
 0.9
17 LOC7454441 reactive Intermediate Deaminase A, chloroplastic 7454441 POPTR_011G139600v3 3.8 4.0
 1.8
 3.2
3.1
 2.3
2.1
 2.6
1.6
 3.6
2.9
 3.2
2.1
 2.8
 2.2
18 LOC7468454 uncharacterized protein SYNPCC7002_A1590 7468454 POPTR_010G230900v3 3.8 2.3
 3.5
 1.5
-1.0
 0.5
-0.6
 1.1
0.7
 2.5
1.0
 2.2
 2.1
 0.4
19 LOC7483645 30S ribosomal protein S10, chloroplastic 7483645 POPTR_011G092800v3 3.8 2.1
 3.7
 1.3
1.1
 2.7
1.8
 2.3
0.7
 3.1
2.6
 3.9
 2.5
20 LOC7480667 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 7480667 POPTR_002G047100v3 3.7 3.4
 2.4
 2.2
2.1
 -0.4
-0.4
 2.4
1.0
 3.1
2.8
 1.4
0.4
 2.5
 -0.0
21 LOC7470900 stress-response A/B barrel domain-containing protein UP3 7470900 POPTR_T022500v3 3.7 2.9
 2.8
 1.8
1.7
 -0.5
-0.8
 1.1
0.2
 1.6
-0.6
 2.2
0.4
 3.5
0.3
 0.6
22 LOC7470782 peptide methionine sulfoxide reductase B5 7470782 POPTR_001G286500v3 3.7 3.4
 2.3






23 LOC7466069 probable envelope ADP,ATP carrier protein, chloroplastic 7466069 POPTR_016G115400v3 3.6 1.1
 4.4
 1.7
0.3
 0.6
-0.3
 -0.0
-0.3
 1.1
0.3
 1.3
0.6
 1.5
-0.4
 -0.1
24 LOC7494321 transcription factor ILR3 7494321 POPTR_004G031800v3 3.5 2.4
 3.0
 1.1
0.5
 1.3
1.1
 1.8
1.4
 2.5
1.5
 2.6
1.7
 1.5
0.2
 1.0
-0.0
25 LOC7487082 peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 7487082 POPTR_012G058700v3 3.5 0.6
 4.7
 0.3
 0.4
-0.6
 2.3
1.4
 2.6
1.0
 1.5
 1.3
 1.4
26 LOC7470562 protein CURVATURE THYLAKOID 1C, chloroplastic 7470562 POPTR_001G184700v3 3.5 2.1
 3.2
 0.9
0.3
 1.4
0.3
 2.1
2.0
 4.1
3.1
 2.7
 1.1
 1.5
27 LOC7468591 protein GRAVITROPIC IN THE LIGHT 1 7468591 POPTR_009G041000v3 3.5 3.6
 1.7
 1.3
 1.9
0.9
 2.1
-0.5
 3.0
1.0
 0.5
 0.3
 -0.7
28 LOC7487463 30S ribosomal protein S31, chloroplastic 7487463 POPTR_016G113700v3 3.4 2.0
 3.3
 2.5
 4.4
2.8
 2.6
2.3
 4.0
3.2
 4.0
 3.6
 6.1
29 LOC7466003 2-Cys peroxiredoxin BAS1, chloroplastic 7466003 POPTR_006G204900v3 3.4 2.7
 2.7
 2.7
2.3
 3.6
3.5
 2.9
2.7
 4.3
4.2
 7.2
5.5
 4.0
2.1
 7.3
30 LOC7494045 50S ribosomal protein L5, chloroplastic 7494045 POPTR_002G154600v3 3.4 0.3
 5.0
 1.7
1.7
 2.5
1.9
 1.5
0.8
 2.7
1.9
 6.6
 2.4
 5.7
31 LOC7481203 2-pyrone-4,6-dicarbaxylate hydrolase 7481203 POPTR_003G167600v3 3.4 2.4
 2.8
 2.4
 1.1
-0.6
 1.0
0.9
 1.9
1.5
 1.9
 0.2
 0.8
32 LOC7482801 photosynthetic NDH subunit of lumenal location 5, chloroplastic 7482801 POPTR_001G060200v3 3.4 2.1
 3.2
 1.8
1.5
 2.0
1.2
 2.0
0.7
 2.7
2.4
 2.0
 2.8
 6.5
33 LOC7472988 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 7472988 POPTR_001G225100v3 3.4 1.7
 3.5
 1.4
0.6
 1.6
-0.1
 0.4
-0.6
 2.2
0.9
 0.6
 1.3
 1.4
34 LOC7488583 phosphoglucan, water dikinase, chloroplastic 7488583 POPTR_002G234500v3 3.3 3.1
 2.1
 0.6
-0.9
 0.7
 -0.9
 0.4
 1.0
-0.7
 0.6
 0.6
35 LOC7481544 alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 7481544 POPTR_010G160200v3 3.3 1.2
 3.9
 0.3
-1.7
 2.1
1.7
 0.6
-0.0
 1.0
0.9
 0.6
0.4
 -0.0
 0.8
36 LOC7456788 30S ribosomal protein S5, chloroplastic 7456788 POPTR_004G045700v3 3.3 2.6
 2.6
 2.1
 3.5
2.8
 2.3
2.1
 4.6
4.5
 3.4
 2.6
 4.3
37 LOC18099383 protein PTST, chloroplastic 18099383 POPTR_017G125400v3 3.3 3.6
1.3
 1.6
1.5
 1.2
0.6
 1.7
0.1
 1.8
 -0.1
 0.4
38 LOC7474233 haloacid dehalogenase-like hydrolase domain-containing protein 3 7474233 POPTR_010G093900v3 3.3 3.1
 1.9
 1.8
 1.0
 -0.1
 0.0
 -0.1
 -0.1
 -0.1
39 LOC7487775 protein LOW PSII ACCUMULATION 1, chloroplastic 7487775 POPTR_002G206300v3 3.3 1.7
 3.3
 1.3
 3.8
1.9
 0.7
0.3
 1.5
0.6
 2.6
 0.7
 2.1
40 LOC7474675 36.4 kDa proline-rich protein 7474675 POPTR_006G065500v3 3.3 3.2
1.6
1.0
 2.2
1.2
 0.7
-0.1
 0.8
0.2
 2.0
 1.4
0.7
 0.6
0.1
41 LOC7489301 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 7489301 POPTR_009G021800v3 3.2 2.5
 2.5
 1.4
0.6
 1.6
-0.1
 0.4
-0.6
 2.2
0.9
 0.6
 1.3
 1.4
42 LOC7467236 50S ribosomal protein 6, chloroplastic 7467236 POPTR_002G112500v3 3.2 2.1
 2.8
 2.7
 1.4
 0.7
 2.7
 2.0
 2.2
 3.7
43 LOC18104326 peroxiredoxin-2E, chloroplastic 18104326 POPTR_013G102100v3 3.2 3.5
2.8
 2.1
 1.4
 3.0
 3.2
 3.5
 5.5
2.0
44 LOC7494525 proteinaceous RNase P 1, chloroplastic/mitochondrial 7494525 POPTR_004G074100v3 3.2 3.6
 1.3
 1.8
0.5
 1.1
0.1
 0.3
0.3
 2.3
1.5
 2.6
 1.4
 1.8
45 LOC7487079 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 7487079 POPTR_012G057700v3 3.2 3.3
 1.6
 1.9
 2.0
0.7
 1.3
0.6
 3.3
2.7
 3.8
 1.5
 2.2
0.3
46 LOC7477421 ubiquitin receptor RAD23c 7477421 POPTR_004G100700v3 3.1 1.8
 3.0
 -0.0
-0.3
 0.7
-0.8
 0.7
-0.2
 1.3
1.2
 1.2
1.0
 0.8
0.0
 0.1
-0.4
47 LOC7478782 malonyl CoA-acyl carrier protein transacylase 7478782 POPTR_009G077800v3 3.1 3.0
2.3
 1.2
0.6
 1.5
-0.3
 2.1
-0.3
 1.9
 1.9
 1.2
48 LOC7495117 30S ribosomal protein S13, chloroplastic 7495117 POPTR_002G088300v3 3.1 1.5
 3.3
 2.0
1.1
 2.3
2.2
 2.8
2.3
 4.1
3.0
 4.0
 2.5
 5.7
49 LOC7456094 probable inactive shikimate kinase like 2, chloroplastic 7456094 POPTR_003G096600v3 3.1 1.6
 3.2
 0.5
 3.1
 0.8
 2.9
 2.8
 1.0
 3.2
50 LOC7469773 uncharacterized LOC7469773 7469773 POPTR_008G045200v3 3.1 3.2
 1.5
 1.3
0.7
 0.1
 -0.0
 1.1
 0.7
 0.4
 3.0
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