Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101252938   plastid-specific 50S ribosomal protein 5-like 
 sly-r.5   101252938   plastid-specific 50S ribosomal protein 5-like 
 sly-m.5   101252938   plastid-specific 50S ribosomal protein 5-like 
 sly-u.4   101259205   50S ribosomal protein 5 alpha, chloroplastic 
 ath-u.4   PSRP5   plastid-specific 50S ribosomal protein 5 
 gma-u.4   100527016   50S ribosomal protein 5, chloroplastic-like 
 gma-u.4   100527134   uncharacterized LOC100527134 
 ppo-u.4   18108976   50S ribosomal protein 5 alpha, chloroplastic 

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Top 50 coexpressed genes to 101252938 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly3010   Ribosome  27 356 34.23
 sly30   Pentose phosphate pathway  1 56 -
 sly240   Pyrimidine metabolism  1 67 -
 sly195   Photosynthesis  1 84 -
 sly230   Purine metabolism  1 90 -

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sly:LOC101252938 (plastid-specific 50S ribosomal protein 5-like) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101252938
sly-r.5
for
101252938
sly-m.5
for
101252938
sly-u.4
for
101259205
ath-u.4
for
PSRP5
gma-u.4
for
100527016
gma-u.4
for
100527134
ppo-u.4
for
18108976
1 LOC101248838 30S ribosomal protein S21, chloroplastic 101248838 15.0 12.5
 8.5
 1.7
0.1
 8.4
 4.9
4.4
 8.7
7.8
 4.7
2 LOC101248722 30S ribosomal protein S10, chloroplastic 101248722 14.0 11.8
 7.7
 1.6
 8.3
 4.4
3.7
 6.5
4.4
 4.1
3.3
3 LOC101250811 50S ribosomal protein L21, chloroplastic 101250811 13.3 11.2
 7.3
 1.6
 13.0
 6.1
5.1
 8.4
7.4
 4.7
-0.1
4 LOC101244639 50S ribosomal protein L27 101244639 12.6 10.5
 7.1
 1.8
 8.6
 3.7
3.1
 8.8
8.1
 5.2
5 LOC101249844 30S ribosomal protein S6 alpha, chloroplastic 101249844 12.4 9.4
 7.9
 1.5
 12.3
 6.9
5.2
 8.2
6.7
 4.1
6 LOC101253247 50S ribosomal protein L12, chloroplastic 101253247 12.1 10.3
 6.6
 1.0
0.7
 8.6
7.6
 5.8
4.3
 11.2
7.4
 4.1
7 LOC101264910 30S ribosomal protein S17, chloroplastic 101264910 11.6 12.1
 4.2
 2.1
4.6
4.3
 8.7
6.4
 6.4
8 LOC101260136 30S ribosomal protein S13 101260136 11.6 9.7
 6.5
 2.0
 13.0
 5.7
5.1
 8.9
6.0
 3.7
3.1
9 LOC101258785 50S ribosomal protein L28, chloroplastic 101258785 11.6 9.0
 7.2
 1.8
 6.4
 4.3
 9.2
 5.3
10 LOC101261433 50S ribosomal protein L24, chloroplastic 101261433 11.5 9.5
 6.6
 1.6
 9.9
 6.1
5.1
 8.1
6.9
 4.1
11 LOC101266952 50S ribosomal protein L17, chloroplastic 101266952 11.3 9.8
 6.0
 1.4
1.0
 13.0
 5.3
5.2
 5.5
5.3
 3.4
2.9
12 LOC101244648 50S ribosomal protein L29, chloroplastic-like 101244648 11.0 9.7
 5.7
 2.4
1.8
 11.5
 5.7
5.3
 9.5
7.8
 5.7
1.7
13 LOC101261350 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 101261350 10.8 9.5
 5.5
 1.6
 3.9
 4.9
2.6
 4.8
2.8
 1.5
14 LOC101245116 uncharacterized LOC101245116 101245116 10.7 9.9
 5.0
 1.1
 10.9
 6.5
4.9
 7.2
7.1
 4.5
15 LOC101252943 50S ribosomal protein L12, chloroplastic 101252943 10.6 8.3
 6.5
 1.0
0.7
 8.6
7.6
 5.8
4.3
 11.2
7.4
 4.1
16 LOC101245574 50S ribosomal protein L19-2, chloroplastic 101245574 10.6 9.3
 5.6
 0.7
 8.8
8.7
 8.0
6.0
 9.4
7.5
 3.8
17 LOC101261139 30S ribosomal protein S20, chloroplastic 101261139 10.6 9.2
 5.5
 1.1
 11.0
 6.3
4.7
 8.8
6.5
 5.7
18 LOC101248220 50S ribosomal protein L13, chloroplastic 101248220 10.2 8.8
 5.4
 2.9
0.7
 9.6
 5.0
 8.0
 3.5
3.4
19 LOC101255358 30S ribosomal protein S5, chloroplastic 101255358 10.0 8.0
 6.1
 1.4
 9.6
 7.6
5.4
 10.8
10.2
 5.0
20 LOC101262221 nucleoside diphosphate kinase 2, chloroplastic 101262221 10.0 6.1
 7.9
 1.4
1.3
 7.9
 5.7
5.4
 4.3
3.7
 4.4
21 LOC101251324 ferredoxin-thioredoxin reductase, variable chain 101251324 10.0 8.7
 5.2
 1.5
 2.2
1.3
 2.9
2.4
 5.3
4.3
 1.4
1.4
22 LOC101247851 30S ribosomal protein S1, chloroplastic 101247851 9.6 9.5
0.8
-1.2
 7.3
 3.3
2.9
 10.0
4.2
 2.9
2.0
23 LOC101246242 30S ribosomal protein S9, chloroplastic 101246242 9.6 7.5
 5.9
 0.7
 9.7
 6.2
4.2
 8.7
6.1
 4.0
3.8
24 LOC101248086 50S ribosomal protein L6, chloroplastic 101248086 9.6 9.5
1.9
 9.5
 5.5
5.2
 8.9
8.5
 6.0
25 LOC101259190 50S ribosomal protein L34, chloroplastic 101259190 9.5 9.3
1.8
 13.9
 6.3
5.6
 10.2
6.0
 5.3
26 LOC101252000 50S ribosomal protein L35, chloroplastic 101252000 9.5 9.1
0.9
 11.8
 6.2
5.3
 8.7
7.2
 3.7
27 LOC101250878 28 kDa ribonucleoprotein, chloroplastic 101250878 9.5 8.3
 4.9
 0.8
 9.7
3.3
 6.1
4.7
 7.6
6.0
 3.6
2.3
28 LOC101256669 50S ribosomal protein L10, chloroplastic 101256669 9.2 9.2
0.6
 10.2
 5.3
 7.2
 3.8
2.6
29 LOC101254712 50S ribosomal protein L4, chloroplastic 101254712 8.8 8.5
1.1
 9.6
 5.4
4.6
 10.5
7.0
 4.6
30 LOC101260274 protein CURVATURE THYLAKOID 1A, chloroplastic-like 101260274 8.7 8.6
0.9
0.3
 7.1
 2.5
2.2
 6.4
3.2
 4.0
3.0
31 LOC101250874 50S ribosomal protein L18, chloroplastic 101250874 8.7 7.3
 4.8
 1.8
 10.2
 6.9
 9.5
 3.7
3.6
32 LOC101255002 uncharacterized LOC101255002 101255002 8.7 8.0
 4.2
 2.3
 8.2
 4.3
3.3
 5.1
4.9
 2.3
33 LOC101259181 50S ribosomal protein L11 101259181 8.6 8.6
 3.3
 1.6
 10.0
 4.0
 5.0
 4.0
2.7
34 LOC101245790 29 kDa ribonucleoprotein A, chloroplastic 101245790 8.5 6.5
 5.4
 1.1
-0.2
 5.8
3.9
 4.0
3.9
 7.6
5.4
 4.1
3.4
35 LOC101255295 50S ribosomal protein L15, chloroplastic 101255295 8.5 6.9
 5.0
 1.0
 9.8
 5.5
 8.2
 5.2
0.9
36 LOC101266059 ferredoxin C 2, chloroplastic 101266059 8.4 6.9
 4.8
 3.3
 4.2
 4.8
3.5
 7.3
4.6
 1.3
37 LOC101267629 ylmG homolog protein 2, chloroplastic 101267629 8.3 7.2
 4.4
 1.7
 4.6
 2.7
2.1
 4.4
3.5
 3.1
38 LOC101254999 30S ribosomal protein S31, chloroplastic 101254999 8.3 7.9
1.5
 14.2
 6.0
5.5
 8.6
8.3
 4.6
39 LOC101264410 thylakoid lumenal 17.4 kDa protein, chloroplastic 101264410 8.2 7.3
 4.1
 1.8
 3.1
 1.9
1.6
 5.3
4.4
 2.6
40 LOC101256588 protein HHL1, chloroplastic 101256588 8.1 7.3
 4.1
 1.7
 7.2
 0.5
 4.7
 3.7
41 LOC104644379 peroxiredoxin-2E-2, chloroplastic 104644379 8.1 7.5
 3.8
 1.4
 3.3
 2.7
 3.4
 1.9
42 LOC101252927 stress enhanced protein 1-like protein 101252927 8.1 7.7
2.6
 6.7
 2.7
2.4
 4.7
4.6
 3.3
2.8
43 LOC101264255 probable ribose-5-phosphate isomerase 3, chloroplastic 101264255 8.0 8.0
1.0
 4.7
 4.4
2.1
 7.1
2.6
 2.2
1.7
44 LOC101262888 50S ribosomal protein L9, chloroplastic 101262888 7.9 7.5
1.3
 10.4
 5.3
4.0
 7.2
6.0
 2.7
45 LOC101263216 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 101263216 7.9 7.7
1.7
0.4
 6.4
 3.7
1.7
 3.7
2.2
 -0.3
46 LOC104649487 ankyrin repeat family protein 104649487 7.8 7.3
 3.6
 1.7
 6.4
 4.9
3.8
 5.7
5.6
 4.2
47 LOC101259256 elongation factor TuB, chloroplastic 101259256 7.8 6.2
 4.6
 -0.1
-0.5
3.8
2.8
 6.3
5.9
 4.8
3.8
48 2-CP1 2-Cys peroxiredoxin 1 101250263 7.8 6.5
 4.3
 0.6
-0.4
 7.7
5.6
 5.6
4.4
 9.0
7.5
 3.9
3.5
49 LOC101262600 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 101262600 7.8 7.1
 3.7
 1.0
 6.9
 3.4
3.2
 4.6
1.7
 2.4
50 LOC101258023 uncharacterized LOC101258023 101258023 7.7 7.3
1.8
0.9
0.5
 3.2
2.9
 1.9
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