Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101255627   4,5-DOPA dioxygenase extradiol 
 sly-r.5   101255627   4,5-DOPA dioxygenase extradiol 
 sly-m.5   101255627   4,5-DOPA dioxygenase extradiol 
 sly-u.4   101252146   extradiol ring-cleavage dioxygenase 
 ath-u.4   LigB   catalytic LigB subunit of aromatic ring-opening dioxygenase family 
 gma-u.4   100797161   4,5-DOPA dioxygenase extradiol 
 gma-u.4   100810694   4,5-DOPA dioxygenase extradiol-like protein-like 
 gma-u.4   100798236   extradiol ring-cleavage dioxygenase-like 
 ppo-u.4   18109422   4,5-DOPA dioxygenase extradiol 
 ppo-u.4   18107919   4,5-DOPA dioxygenase extradiol 
 ppo-u.4   7463018   4,5-DOPA dioxygenase extradiol 
 mtr-u.4   25484511   extradiol ring-cleavage dioxygenase 
 mtr-u.4   11420281   extradiol ring-cleavage dioxygenase 
 osa-u.4   4325095   extradiol ring-cleavage dioxygenase 
 osa-u.4   4324833   extradiol ring-cleavage dioxygenase 

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Top 50 coexpressed genes to 101255627 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly940   Phenylpropanoid biosynthesis  10 152 11.58
 sly1230   Biosynthesis of amino acids  7 219 6.05
 sly360   Phenylalanine metabolism  5 50 6.89
 sly100   Steroid biosynthesis  4 35 5.83
 sly400   Phenylalanine, tyrosine and tryptophan biosynthesis  4 46 5.35

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sly:LOC101255627 (4,5-DOPA dioxygenase extradiol) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101255627
sly-r.5
for
101255627
sly-m.5
for
101255627
sly-u.4
for
101252146
ath-u.4
for
LigB
gma-u.4
for
100797161
gma-u.4
for
100810694
gma-u.4
for
100798236
ppo-u.4
for
18109422
ppo-u.4
for
18107919
ppo-u.4
for
7463018
mtr-u.4
for
25484511
mtr-u.4
for
11420281
osa-u.4
for
4325095
osa-u.4
for
4324833
1 LOC101248210 4-coumarate--CoA ligase 101248210 5.8 5.9
 2.2
 3.3
0.9
 3.5
2.3
 1.2
1.0
 1.8
1.7
 6.6
4.4
 0.5
-0.2
 0.4
0.2
 2.0
1.4
 2.0
1.8
 4.1
2.9
 4.8
2.4
 1.8
1.3
2 LOC101249371 alcohol dehydrogenase-like 6 101249371 5.6 5.4
 2.3
 1.3
 1.9
 1.5
 0.8
 1.7
 0.5
 0.2
 2.7
 1.3
 4.7
 2.6
 0.5
3 LOC101246092 p-coumaroyl quinate/shikimate 3'-hydroxylase 101246092 5.5 6.5
1.5
1.4
 2.0
 0.3
-0.5
 1.5
-0.7
 5.6
4.2
 0.9
0.1
 0.9
0.4
 1.1
-0.2
 1.4
 4.1
 3.3
 1.3
4 LOC101254287 caffeoylshikimate esterase 101254287 5.4 6.1
 1.4
 1.7
 2.7
 0.4
 1.4
 4.9
 -0.0
-0.7
 -0.1
-0.7
 4.6
2.8
 1.7
 4.1
 0.7
 -0.5
5 LOC101248404 cytochrome b5-like 101248404 5.2 5.5
 1.8
 2.5
2.0
 3.1
2.6
 1.3
1.1
 2.0
1.2
 1.9
1.1
 0.5
0.2
 1.0
0.5
 2.8
2.4
 2.2
1.0
 6.6
0.0
 2.5
1.2
 0.7
0.5
6 LOC101243656 phenylalanine ammonia-lyase 6 101243656 5.1 6.1
1.3
1.1
 2.1
1.8


-0.1
-0.2
 0.3
0.2
 2.6
2.3
 3.7
3.3
 4.2
3.7
 4.0
3.9
 2.6
2.4
7 LOC101252525 glutathione S-transferase zeta class-like 101252525 4.7 3.6
 3.0
 1.0
0.5
 1.7
 -0.3
 0.9
 1.1
 0.3



8 LOC101265242 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 101265242 4.5 5.5
 0.7
 0.1
-1.1
 -1.1
-1.2
 -0.3
-0.6
 -0.4
-0.6
 -0.2
-0.3
 0.4
-0.4
 0.3
-0.8
 -1.1
-1.5
 -0.4
-0.5
 -0.7
-0.9
 0.5
-0.3
 0.4
0.3
9 NAGK N-acetylglutamate kinase 101267182 4.4 4.6
 1.5
 0.1
 -0.9
 -0.6
-1.2
 0.1
-0.8
 1.5
-0.9
 0.5
-0.2
 0.4
-0.3
 0.3
0.2
 -0.6
 -1.0
 0.5
0.3
 -0.0
-0.2
10 DHQS dehydroquinate synthase 544273 4.3 5.4
 0.6
 4.1
 1.7
 1.0
0.4
 1.5
0.3
 1.2
0.7
 0.3
 0.3
 2.4
 1.1
 3.4
 1.1
 0.4
11 LOC101246167 lysophospholipid acyltransferase 1 101246167 4.2 2.5
 3.4
 2.9
1.0
 0.6
-0.5
 0.4
0.1
 0.4
0.4
 2.4
1.8
 1.4
0.5
 0.5
0.5
 1.5
1.2
 1.0
 1.2
 0.3
 0.8
12 4CL 4-coumarate--CoA ligase 101249624 4.1 4.0
 1.8
 3.3
0.9
 3.5
2.3
 1.2
1.0
 1.8
1.7
 6.6
4.4
 0.5
-0.2
 0.4
0.2
 2.0
1.4
 2.0
1.8
 4.1
2.9
 4.8
2.4
 1.8
1.3
13 LOC101251165 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 101251165 3.9 3.1
 2.4
 -0.2
-0.2
 1.6
0.1
 -0.3
-0.5
 0.0
-0.2
 1.0
-0.5
 0.7
-0.4
 0.8
-0.6
 1.0
-0.3
 1.0
-0.5
 0.7
0.6
 1.2
0.2
 -0.1
-0.6
14 LOC101256090 serine hydroxymethyltransferase 4 101256090 3.9 4.1
 1.3
 1.5
0.1
 0.6
-0.1
 0.7
0.5
 1.1
0.7
 4.6
2.2
 0.6
0.4
 0.4
0.1
 2.4
2.4
 1.0
0.4
 4.9
3.1
 3.0
0.9
 1.4
-0.8
15 HYD2 delta14-sterol reductase 100750253 3.8 2.5
 2.8
 -0.7
 -0.9
 -0.2
 0.6
 -0.5
 -0.2
 -0.2
 0.0
 0.4
 0.4
 0.3
-0.3
 -0.3
-0.5
16 LOC101267111 uncharacterized LOC101267111 101267111 3.7 3.8












17 LOC101244469 aminotransferase 101244469 3.7 2.7
 2.4
 1.4
 1.9
 -0.4
-0.6
 0.5
-0.2
 0.9
0.1
 1.9
 1.8
 1.1
 0.7
 2.0
 0.5
 -1.0
18 LOC101255180 uncharacterized oxidoreductase At4g09670 101255180 3.6 2.1
 2.9
 1.3
-0.2
 1.4
0.2
 0.6
0.3
 1.9
1.0
 1.0
0.3
 0.5
-0.9
 0.7
-1.5
 -0.2
-1.1
 0.3
0.1
 0.5
0.2
 -0.4
 1.0
19 LOC101249775 pectinesterase inhibitor 7-like 101249775 3.6 1.8
 3.2
 1.8
1.4
 1.5
1.1
 1.0
0.8
 0.9
0.6
 2.3
1.4
 1.4
1.0
 1.6
1.4
 1.0
0.9
 0.5
0.2
 1.8
1.5
 -0.3
 0.9
20 LOC101259187 probable xyloglucan endotransglucosylase/hydrolase protein 32 101259187 3.6 1.9
 3.1
 1.9
0.3
 1.0
0.4
 0.7
0.3
 2.4
1.2
 1.7
0.7
 -0.1
-0.9
 0.6
-0.9
 -0.5
-0.5
 0.6
0.5
 0.9
0.3
 -0.0
-0.1
 2.1
1.7
21 LOC101257739 short-chain dehydrogenase TIC 32, chloroplastic 101257739 3.5 3.5
 1.4
 -0.2
-0.5
 2.8
1.2
 0.7
0.5
 1.5
1.1
 1.1
0.7
 1.3
1.0
 1.0
0.3
 0.7
0.4
 1.2
1.1
 1.1
0.6
 1.9
-0.2
 0.5
-0.7
22 PAT prephenate aminotransferase 100736464 3.5 4.2
 0.6
 4.7
 2.1
 2.2
1.0
 2.1
1.6
 1.1
0.9
 0.2
-0.0
 1.0
-0.2
 2.1
1.2
 1.9
1.2
 5.3
1.1
 3.1
 1.1
23 SSR2 sterol side chain reductase 2 101244831 3.5 2.3
 2.5
 -0.7
-0.8
 -1.4
 1.3
0.3
 1.4
-0.1
 0.9
0.1
 0.2
-1.6
 -0.1
-1.8
 0.7
-0.3
 -0.2
 -1.3
 -1.0
 0.1
24 LOC101256613 probable sugar phosphate/phosphate translocator At1g12500 101256613 3.5 3.5
 1.4
 1.5
 -0.6
 -0.1
-0.3
 0.3
-0.7
 -0.0
-0.6
 -0.5
-0.8
 -0.8
-1.1
 1.4
-0.0
 -0.7
 1.4

25 LOC101259725 serine hydroxymethyltransferase 4 101259725 3.5 3.4
1.5
0.1
 0.6
-0.1
 0.7
0.5
 1.1
0.7
 4.6
2.2
 0.6
0.4
 0.4
0.1
 2.4
2.4
 1.0
0.4
 4.9
3.1
 3.0
0.9
 1.4
-0.8
26 SK shikimate kinase precursor 544078 3.5 3.1
 1.7
 3.4
 2.3
2.0
 1.6
1.0
 0.7
0.5
 1.9
1.0
 0.2
0.1
 -0.1
-0.3
 3.1
2.6
 1.1
 1.6
 3.9
0.0
 1.3
1.3
27 LOC101268630 ribonucleoside-diphosphate reductase small chain 101268630 3.5 2.9
 1.9
 0.8
 1.0
 0.7
0.6
 0.5
-0.2
 -0.2
-0.4
 -0.6
-1.4
 -0.5
-1.2
 -0.3
-0.7
 0.8
0.5
 -0.0
-0.1
 0.2
0.2
 0.5
0.4
28 LOC101263898 vacuolar iron transporter 1 101263898 3.5 2.4
 2.4
 0.8
1.7
-0.3
 0.8
-0.7
 1.5
-0.2


-0.1
 -0.8
 1.6
 -0.5
29 LOC101267503 ATP-citrate synthase beta chain protein 2 101267503 3.4 3.7
1.1
0.1
 -0.2
-0.6
 0.7
0.6
 1.1
0.6
 0.6
0.4
 0.6
-0.4
 0.8
-0.5
 2.0
0.9
 1.7
 3.9
 0.1
 -0.9
30 HYD1 probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase 101259646 3.4 3.0
 1.8
 -0.8
 -0.1
 1.2
0.5
 2.1
1.1
 1.8
0.9
 -0.8
 -0.7
 1.8
 0.5
 -0.5
 0.2
 -0.2
31 LOC544153 phospho-2-dehydro-3-deoxyheptonate aldolase 544153 3.4 3.9
 0.8
 2.7
0.4
 2.1
0.3
 1.0
0.3
 2.9
-0.5
 2.2
-1.5
 0.7
-0.2
 0.4
0.1
 3.8
2.2
 3.0
-0.9
 3.4
0.3
 2.8
2.0
 0.7
0.6
32 LOC101055528 Hop-interacting protein THI101 101055528 3.4 3.2
 1.6











33 LOC101250897 probable beta-1,4-xylosyltransferase IRX10L 101250897 3.3 3.1
 1.6
 2.3
-0.4
 0.5
-0.0
 -0.8
-0.8
 1.7
0.1
 2.3
0.9
 0.1
-0.1
 0.3
0.3
 0.8
0.8
 0.3
0.1
 1.7
1.7
 3.1
2.9
 1.7
1.3
34 LOC101264172 UDP-glycosyltransferase 91A1 101264172 3.3 3.1
2.2
0.8
 0.1
-0.4
 0.4
-0.3
 1.7
1.3
 2.1
1.5
 1.1
0.8
 1.3
1.2
 0.8
0.5
 1.4
0.9
 2.1
2.0
 0.9
0.6
 0.9
0.8
35 LOC101250703 beta-1,6-galactosyltransferase GALT29A 101250703 3.3 3.3
-0.1
 0.6
 0.8
0.6
 0.4
-0.1
 1.2
1.1
 -0.0
-0.7
 -0.2
-0.4
 0.7
0.1
 -1.4
 -1.0
 0.0
 -0.7
36 LOC101244196 trans-cinnamate 4-monooxygenase 101244196 3.3 4.1
1.2
 2.4
 1.1
1.1
 1.8
-0.2
 1.6
1.4
 0.3
-0.0
 0.1
-0.0
 1.0
0.8
 1.6
 3.4
 3.3
0.3
 1.2
-0.5
37 LOC101265691 putative glycosyltransferase 7 101265691 3.3 2.9
 1.7
 0.1
-0.5
 0.7
0.6
 0.0
-0.0
 0.4
-0.2
 1.9
0.7
 -0.8
-1.1
 -0.9
-1.0
 0.8
0.3
 -0.5
 0.3
 1.0
 -0.1
38 PAL3 phenylalanine ammonia-lyase 3 101243922 3.3 4.4
 0.1
 1.3
1.1
 2.1
1.8


-0.1
-0.2
 0.3
0.2
 2.6
2.3
 3.7
3.3
 4.2
3.7
 4.0
3.9
 2.6
2.4
39 LOC101263879 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 101263879 3.3 3.2
 1.3
 2.8
 1.7
 0.7
-0.2
 0.9
0.3
 -0.4
-0.9
 0.2
 0.7
 1.5
 1.8
 1.8
 1.7
 0.9
40 LOC101261460 ATP-citrate synthase alpha chain protein 3 101261460 3.2 3.8
1.5
1.2
 1.5
0.7
 1.5
1.1
 0.9
0.9
 1.5
1.3
 1.2
0.7
 0.8
0.8
 2.5
2.2
 2.0
1.3
 5.2
2.2
 2.5
1.1
 0.5
0.4
41 PAL2 phenylalanine ammonia-lyase 2 101249824 3.2 3.9
1.3
1.1
 2.1
1.8


-0.1
-0.2
 0.3
0.2
 2.6
2.3
 3.7
3.3
 4.2
3.7
 4.0
3.9
 2.6
2.4
42 LOC101256271 shikimate O-hydroxycinnamoyltransferase 101256271 3.2 3.9
0.6
 2.0
 1.1
0.0
 1.7
1.6
 6.1
2.1
 0.1
-0.5
 0.5
-0.3
 2.7
1.0
 1.2
0.3
 3.3
0.9
 4.9
4.3
 0.4
0.3
43 ODC ornithine decarboxylase 544209 3.2 2.4
 2.1
 1.4
-0.0
-0.2
 0.9
-0.5
 0.3
-0.5
 0.5
 0.0
 0.4
 0.3
 -0.2
 -0.4
 0.7
44 HMGS1 hydroxymethylglutaryl-CoA synthase 1 101249394 3.2 3.6
 0.8
 3.1
-0.7
 1.2
 1.3
1.1
 1.5
1.0
 2.4
1.6
 0.9
0.2
 0.5
0.2
 2.5
1.9
 0.9
-0.4
 1.1
-0.8
 0.5
-0.7
 0.6
-0.5
45 SQS1 squalene synthase 100316899 3.1 2.5
 1.9
 1.1
 1.7
0.7
 0.4
-0.0
 1.2
0.4
 1.7
1.2
 0.9
-1.0
 0.6
-0.9
 4.1
0.5
 -0.0
 1.2
 0.7
-1.8
 -0.2
-1.3
46 LOC101255510 cellulose synthase-like protein G2 101255510 3.1 2.2
 2.2
 0.1
-0.2
0.6
0.4
 2.1
1.6
 2.3
2.1
 0.1
-0.2
 0.5
0.4
 0.1
-0.4
 1.9
0.4
 0.7
0.3

47 LOC101243631 phenylalanine ammonia-lyase-like 101243631 3.1 3.9
1.3
1.1
 2.1
1.8


-0.1
-0.2
 0.3
0.2
 2.6
2.3
 3.7
3.3
 4.2
3.7
 4.0
3.9
 2.6
2.4
48 LOC101256993 polyamine-modulated factor 1-binding protein 1 101256993 3.1 1.8
 2.4
 1.9
0.7
 1.6
0.3
 1.2
0.9
 -0.5
-0.9
 -1.1
-1.1
 1.3
-0.9
 1.3
-0.6
 0.9
0.1
 1.1
 1.2
 0.1
-0.8
 -0.7
-0.8
49 LOC101251438 probable N-succinyldiaminopimelate aminotransferase DapC 101251438 3.1 2.6
 1.7
 2.3
 0.4
 0.1
0.1
 1.5
0.9
 0.6
0.5
 0.7
0.3
 0.2
-0.0
 0.6
0.4
 -0.3
-0.9
 1.1
-0.8
 -0.4
 -0.7
50 LOC101264803 putative dihydroflavonol 4-reductase 101264803 3.0 1.9
 2.3
 1.3
 0.3
 0.9
 0.9
 -0.9
 2.1
-0.0
 1.9
0.4
 0.3
-0.5
 -0.6
 -0.9
 1.4
-0.4
 -0.2
-1.0
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