Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101255688   protein TIC 22, chloroplastic 
 sly-r.5   101255688   protein TIC 22, chloroplastic 
 ath-u.4   Tic22-IV   Tic22-like family protein 
 gma-u.4   100802935   protein TIC 22, chloroplastic 
 gma-u.4   100802286   protein TIC 22, chloroplastic 
 ppo-u.4   7472690   protein TIC 22, chloroplastic 
 ppo-u.4   18104899   protein TIC 22, chloroplastic 
 mtr-u.4   11423232   protein TIC 22, chloroplastic 
 osa-u.4   4340471   protein TIC 22, chloroplastic 

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Top 50 coexpressed genes to 101255688 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly860   Porphyrin metabolism  2 47 2.24
 sly970   Aminoacyl-tRNA biosynthesis  2 113 -
 sly3015   mRNA surveillance pathway  2 129 -
 sly1230   Biosynthesis of amino acids  3 228 -
 sly1240   Biosynthesis of cofactors  3 252 -

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sly:LOC101255688 (protein TIC 22, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101255688
sly-r.5
for
101255688
ath-u.4
for
Tic22-IV
gma-u.4
for
100802935
gma-u.4
for
100802286
ppo-u.4
for
7472690
ppo-u.4
for
18104899
mtr-u.4
for
11423232
osa-u.4
for
4340471
1 LOC101260778 uncharacterized LOC101260778 101260778 6.7 6.6
 3.1
 0.8
0.0
 1.4
1.3
 0.7
0.7
 -0.0
-0.1
 1.7
 0.5
2 LOC543966 clp-like energy-dependent protease 543966 6.1 6.5
 7.6
 3.9
2.9
 4.3
2.9
 3.4
1.6
 1.6
-0.0
 5.2
 1.1
3 LOC101261866 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 101261866 6.0 6.4
 6.9
 1.8
1.7
 2.4
2.1
 1.6
 2.2
 5.3
 1.1
4 ABCI6 ABC transporter I family member 6, chloroplastic 101247531 6.0 6.1
 6.3
 3.3
3.2
 3.7
3.0
 2.8
 2.9
 4.2
 0.6
5 LOC101266495 uncharacterized LOC101266495 101266495 5.8 5.8
 2.8
2.2
 2.0
1.0
 2.9
2.4
 2.5
0.2
 1.8
0.4
 2.3
6 LOC101262377 putative rRNA methyltransferase YlbH 101262377 5.7 6.1
 3.1
 2.0
 1.7
 2.7
 1.7
 2.3
 1.1
7 LOC101253726 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 101253726 5.6 5.9
 7.9
 3.7
 4.8
 0.5
 1.4
 8.1
 1.2
8 LOC101262775 thioredoxin O2, mitochondrial 101262775 5.6 5.7
 3.7
0.6
 2.4
2.2
 3.4
2.9
 1.0
 0.8
 2.4
 1.2
9 LOC101260616 peptidyl-tRNA hydrolase, mitochondrial 101260616 5.6 5.9
 3.3
 3.0
 3.1
 1.5
 1.1
 4.8
 1.0
-0.0
10 LOC101246403 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like 101246403 5.6 5.7
 5.8
5.0
 3.6
2.7
 3.7
3.7
 1.9
1.6
 3.1
2.9
 4.4
4.2
 1.1
11 LOC101253795 adenylate kinase, chloroplastic 101253795 5.6 5.8
 1.5
 2.3
 3.2
 2.1
0.8
 0.6
0.2
 2.0
 -0.4
12 LOC101253790 probable dual-specificity RNA methyltransferase RlmN 101253790 5.6 5.9
 3.6
 3.4
1.7
 3.4
3.2
 3.8
 2.9
 4.0
 1.3
13 LOC101244861 uncharacterized LOC101244861 101244861 5.4 5.6
 1.8
0.9
 3.4
2.2
 3.8
3.2
 2.8
 1.4
 3.5
2.4
 0.2
-0.4
14 LOC101246421 protein DCL homolog, chloroplastic 101246421 5.3 5.9
 0.7
 3.0
 2.8
 3.7
 2.4
 1.4
 2.4
15 LOC101247052 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 101247052 5.3 5.8
 5.7
 3.8
3.2
 5.2
4.2
 2.4
 1.8
 4.1
 1.8
16 LOC101245198 ribosomal protein S6-like protein 101245198 5.3 5.7
 2.2
 3.0
2.9
 3.7
3.3
 1.9
 1.6
 1.4
17 LOC101263138 serine hydroxymethyltransferase 3, chloroplastic 101263138 5.3 5.3
 2.9
 1.0
 0.5
 0.7
 0.8
 3.0
18 Cpn21 chaperonin 21 precursor 543643 5.2 5.0
 3.4
 3.4
2.4
 2.1
1.9
 3.7
3.2
 2.0
1.5
 3.3
1.7
 0.6
-0.8
19 APX7 stromal ascorbate peroxidase 7 101262528 5.2 5.3
 2.7
1.3
 0.9
-0.1
 1.3
1.1
 1.7
0.2
 1.3
0.7
 2.1
 1.0
0.6
20 LOC101255220 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial 101255220 5.2 5.3
 5.2
 4.3
3.0
 3.3
2.2
 0.9
 1.4
 1.3
 0.8
21 LOC101243765 acyl-protein thioesterase 2 101243765 5.1 5.5
 2.2
0.4
 0.9
0.6
 1.0
0.7
 1.6
0.1
 0.5
0.5
 0.4
-0.4
 0.4
22 CHRD constitutive plastid-lipid associated protein 100736438 5.1 5.2
 1.8
 3.1
2.9
 2.8
2.7
 3.3
1.5
 1.6
1.1
 2.2
0.3
 -0.4
23 LOC101267977 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 101267977 5.0 5.4
 2.9
 3.9
3.6
 4.9
4.1
 3.6
 1.3
 2.8
 1.4
1.0
24 LOC101257824 membrane-associated protein VIPP1, chloroplastic 101257824 5.0 5.3
 2.7
 2.0
1.9
 1.5
1.4
 2.6
1.9
 4.0
2.2
 3.1
 0.7
25 LOC101264001 uncharacterized protein At4g37920 101264001 4.9 4.8
 4.2
 2.3
 1.4
 2.6
0.8
 2.8
1.3
 3.9
 1.4
26 LOC101255988 outer envelope pore protein 24A, chloroplastic 101255988 4.9 5.2
 2.6
2.0
 1.9
0.9
 2.5
1.9
 1.0
0.5
 2.3
1.5
 0.6
 0.4
27 LOC101268418 pre-mRNA cleavage factor Im 25 kDa subunit 2 101268418 4.9 5.2
 4.4
 0.9
0.5
 1.0
1.0
 1.1
 0.7
 1.9
 1.4
28 LOC101264296 superoxide dismutase [Cu-Zn] 2 101264296 4.9 4.5
 2.2
 2.4
 3.2
 1.7
1.6
 0.7
-0.1
 1.3
 0.6
29 LOC101244248 glutaredoxin 101244248 4.8 4.6
 1.9
 1.5
1.4
 2.7
2.1
 3.2
 2.3
 3.8
 0.3
30 LOC101251323 peroxiredoxin-2F, mitochondrial 101251323 4.8 4.7
 3.5
 3.5
2.9
 2.5
2.4
 2.0
 3.2
 1.3
 -0.6
31 LOC101259105 uncharacterized LOC101259105 101259105 4.8 5.1
 0.5
 1.4
1.0
 1.6
1.2
 2.4
1.8
 1.9
1.0
 0.2
 0.4
32 LOC101249520 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 101249520 4.8 4.3
 5.6
 2.5
 4.5
 1.3
 2.6
 1.9
 0.2
33 ABCI9 ABC transporter I family member 9 101254359 4.8 4.9
 2.5
 4.4
 4.6
 2.0
 2.4
 2.9
 0.9
34 LOC101250891 cysteine desulfurase 1, chloroplastic 101250891 4.7 5.1
 3.8
 1.8
1.7
 2.9
2.8
 2.3
 1.4
 5.6
 2.3
35 LOC101262349 nifU-like protein 1, chloroplastic 101262349 4.7 5.1
 3.7
 1.9
 2.1
 2.1
0.0
 1.1
0.1
 4.8
 0.9
36 LOC101259460 ribosome-binding ATPase YchF 101259460 4.7 4.7
 2.8
 -0.0
 1.8
 3.9
 1.9
 1.7
 -0.2
37 LOC101259201 glutamate--tRNA ligase, chloroplastic/mitochondrial 101259201 4.7 5.1
 3.1
 2.2
0.7
 3.9
1.7
 1.9
 0.7
 2.3
 0.6
38 LOC101252192 LL-diaminopimelate aminotransferase, chloroplastic 101252192 4.6 4.7
 4.9
0.0
 1.9
-0.3
 2.5
1.4
 0.4
-0.5
 1.7
0.5
 1.9
-0.8
 0.7
39 LOC101262629 uncharacterized LOC101262629 101262629 4.6 4.8
 3.3
 2.2
1.6
 2.9
2.1
 3.6
2.2
 2.1
0.9
 2.8
40 LOC101246752 chlorophyll synthase, chloroplastic 101246752 4.6 5.2
 0.8
 4.1
3.8
 4.6
2.9
 0.4
-0.0
 0.6
-0.3
 1.9
 1.5
41 LOC101260232 histone deacetylase complex subunit SAP18 101260232 4.6 4.6
 1.1
 2.0
 2.5
 0.5
0.4
 1.0
0.2
 1.3
 0.6
42 LOC101258263 protein TIC 20-I, chloroplastic 101258263 4.6 4.8
6.8
4.2
 4.7
3.2
 2.5
1.1
 1.6
0.9
 3.6
 0.8
-0.1
43 LOC101250390 indole-3-glycerol phosphate synthase, chloroplastic 101250390 4.6 4.4
 2.0
0.7
 2.9
2.1
 3.5
3.0
 1.1
 2.6
 1.0
 0.7
44 LOC101250594 glutamic acid-rich protein 101250594 4.6 4.2
 3.0
2.4
 1.9
0.8
 2.6
2.6
 4.0
 1.1
 2.6
 2.2
45 LOC101264723 macro domain-containing protein VPA0103 101264723 4.6 4.7
 1.9
 1.7
 2.0
 -1.1
 -0.3
 0.8
 1.1
46 LOC101251351 protein TIC 40, chloroplastic 101251351 4.5 4.7
 3.7
 2.8
2.3
 3.3
2.9
 2.6
2.4
 3.2
1.6
 3.7
 1.2
47 PDF1B peptide deformylase-like protein 543648 4.5 4.5
 4.6
 2.3
0.1
 2.1
-0.0
 1.7
 0.6
 3.8
 0.7
0.7
48 LOC101264657 peptidyl-tRNA hydrolase ICT1, mitochondrial 101264657 4.5 4.6
 5.5
 0.8
0.6
 1.7
0.9
 2.9
1.2
 2.3
2.1
 3.2
 1.1
49 LOC101248760 U2 small nuclear ribonucleoprotein A' 101248760 4.5 4.3
 1.8
 0.2
-0.3
 0.4
0.3
 1.8
 1.3
 1.4
 1.3
50 LOC101243758 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 101243758







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