Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101261874   glycogen phosphorylase 1-like 
 sly-r.5   101261874   glycogen phosphorylase 1-like 
 gma-u.4   100779066   glycogen phosphorylase 1 
 ppo-u.4   18097490   glycogen phosphorylase 1 
 mtr-u.4   11443309   glycogen phosphorylase 1 

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Top 50 coexpressed genes to 101261874 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly500   Starch and sucrose metabolism  6 136 6.05
 sly30   Pentose phosphate pathway  1 56 -
 sly51   Fructose and mannose metabolism  1 67 -
 sly10   Glycolysis / Gluconeogenesis  2 134 -
 sly1240   Biosynthesis of cofactors  2 252 -

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sly:LOC101261874 (glycogen phosphorylase 1-like) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101261874
sly-r.5
for
101261874
gma-u.4
for
100779066
ppo-u.4
for
18097490
mtr-u.4
for
11443309
1 LOC100191113 D-cysteine desulfhydrase 100191113 5.5 5.3
 2.9
 1.1
 2.3
2 LOC101249451 translation factor GUF1 homolog, chloroplastic 101249451 5.3 5.7
 4.2
3.3
 3.0
 1.3
3 LOC101251764 pantothenate kinase 2 101251764 5.3 5.8
 2.3
2.3
 3.2
-0.5
 1.3
4 LOC101262122 SNF2 domain-containing protein CLASSY 1-like 101262122 5.0 5.5
 -0.4
-0.9
 0.5
 1.3
5 LOC101259578 nucleolar GTP-binding protein 1 101259578 5.0 5.4
 1.1
 0.4
 1.3
6 LOC101244113 alpha-glucan phosphorylase, H isozyme 101244113 4.8 5.1
 2.4
2.3
 2.5
 1.6
7 LOC101268420 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 101268420 4.7 4.8
 3.7
3.4
 0.5
 3.7
8 GWD glucan water dikinase 100191125 4.7 4.4
 3.4
3.3
 3.1
2.0
 2.0
9 LOC101250908 putative DUF21 domain-containing protein At3g13070, chloroplastic 101250908 4.7 5.1
 1.2
 0.4
 1.2
10 LOC100316882 starch synthase III 100316882 4.4 4.7
 4.6
2.7
 2.2
 2.7
11 LOC101255710 protein ENHANCED DISEASE RESISTANCE 2 101255710 4.4 4.6
 2.0
1.5
 1.7
 1.7
12 LOC101247052 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 101247052 4.3 4.4
 5.4
3.3
 1.5
 0.8
13 LOC101268704 cytochrome c-type biogenesis ccda-like chloroplastic protein 101268704 4.3 4.6
 2.5
1.7
 0.4
 0.1
14 LOC101254735 uncharacterized LOC101254735 101254735 4.3 4.6
 1.5
 1.5
 1.2
15 LOC101253841 4-alpha-glucanotransferase DPE2 101253841 4.3 4.4
 4.3
2.6
 4.0
2.2
 0.8
16 LOC101267287 phosphoglucomutase, chloroplastic 101267287 4.1 4.7
 2.3
1.5
 2.7
1.3
 5.8
17 LOC101254309 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 101254309 4.1 4.2
 4.1
3.5
 2.3
2.0
 2.4
2.0
18 LOC101263849 phosphoglucan, water dikinase, chloroplastic 101263849 4.1 4.1
 5.1
 3.5
3.3
 3.0
2.6
19 LOC101268433 aminopeptidase P2 101268433 4.1 4.2
 6.5
 1.8
 1.3
20 LOC101250081 proteasome adapter and scaffold protein ECM29 101250081 4.1 4.4
 4.6
 0.7
 2.3
21 LOC101246664 K(+) efflux antiporter 2, chloroplastic 101246664 4.1 4.5
 1.3
1.2
 2.4
1.7
 4.2
3.9
22 LOC101263332 U-box domain-containing protein 34 101263332 4.1 4.3
 -1.4
 0.4
 1.2
23 LOC101245868 glutamine-dependent NAD(+) synthetase 101245868 4.0 4.4
 2.0
0.3
 0.2
0.2
 0.4
24 LOC101245302 protein TIC 62, chloroplastic 101245302 4.0 4.3
 1.7
1.5
 0.6
0.4
 0.8
25 LOC104645877 uncharacterized LOC104645877 104645877 4.0 4.5


26 LOC101260649 actin-related protein 5 101260649 4.0 4.4
 0.2
0.2
 0.6
 1.7
27 LOC101260607 chloroplastic lipocalin 101260607 4.0 4.3
 1.9
1.0
 2.5
 -1.1
28 LOC101256497 uncharacterized LOC101256497 101256497 4.0 4.2
 1.1
0.9
 0.5
 1.9
29 LOC101249509 probable cadmium/zinc-transporting ATPase HMA1, chloroplastic 101249509 4.0 4.3
 2.4
2.3
 1.4
 2.4
30 ABCD2 ABC transporter D family member 2 101256258 4.0 4.2
 1.7
 0.6
 0.1
31 LOC101262041 uncharacterized LOC101262041 101262041 4.0 3.8
 3.6
3.5
 1.9
1.6
 -0.5
32 LOC101267717 uncharacterized membrane protein YjcL 101267717 4.0 4.3
2.0
1.5
 1.2
33 LOC101263928 DNA topoisomerase 6 subunit B 101263928 4.0 4.3
 0.6
 1.0
 0.2
34 LOC101265032 pentatricopeptide repeat-containing protein At2g31400, chloroplastic 101265032 4.0 4.2
 3.9
2.9
 1.0
-0.3
 1.3
0.0
35 LOC101257065 peptide chain release factor PrfB1, chloroplastic 101257065 4.0 4.2
 4.3
 1.3
 1.1
36 LOC101259073 putative tRNA pseudouridine synthase 101259073 3.9 4.2
 1.3
1.2
 0.8
 1.9
0.7
37 LOC101256234 acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like 101256234 3.9 4.1
 2.7
0.5
 -0.4
 2.3
38 LOC101265475 SURP and G-patch domain-containing protein 1-like protein 101265475 3.9 4.0
 0.9
0.8
 -2.1
-2.6
 0.9
0.7
39 LOC101251382 chitinase domain-containing protein 1 101251382 3.9 5.0
 -0.0
 1.7
 0.2
40 LOC101263393 DExH-box ATP-dependent RNA helicase DExH3 101263393 3.9 4.3
 2.7
1.8
 3.6
0.5
 2.7
1.4
41 LOC101248721 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic 101248721 3.9 4.1
 0.9
0.5
 1.2
 0.4
42 LOC101265322 serine protease SPPA, chloroplastic 101265322 3.9 4.1
 3.8
1.0
 1.3
 2.6
-0.0
43 LOC101260285 cell division control protein 48 101260285 3.9 4.2
 0.2
 0.6
 0.4
44 LOC101257803 NADP-specific glutamate dehydrogenase 101257803 3.9 4.2
 1.3
0.3
 0.5
 2.3
45 LOC101262982 serine/threonine-protein phosphatase 6 regulatory subunit 3 101262982 3.9 3.8
 2.3
2.3
 -0.4
-0.9
 2.0
1.8
46 LOC101257965 mediator of RNA polymerase II transcription subunit 23 101257965 3.8 4.2
 2.5
 2.8
 2.0
47 LOC101255378 WD repeat-containing protein ATCSA-1-like 101255378 3.8 4.0
 1.0
-0.1
 0.8
 1.0
48 LOC100191117 starch synthase VI 100191117 3.8 4.1
0.6
49 LOC101247453 ribonuclease II, chloroplastic/mitochondrial 101247453 3.8 3.9
 3.9
 1.8
 1.4
50 LOC101247618 phenylalanine--tRNA ligase, chloroplastic/mitochondrial 101247618 3.8 3.4
 2.6
1.8
 2.1
 1.2
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