Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   COR413IM1   cold-regulated 413 inner membrane protein 1, chloroplastic 
 sly-r.5   COR413IM1   cold-regulated 413 inner membrane protein 1, chloroplastic 
 ath-u.4   COR314-TM2   cold regulated 314 thylakoid membrane 2 
 ath-u.4   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 gma-u.4   100306024   uncharacterized LOC100306024 
 ppo-u.4   18095285   cold-regulated 413 inner membrane protein 1, chloroplastic 
 mtr-u.4   11408207   cold-regulated 413 inner membrane protein 1, chloroplastic 
 osa-u.4   4339637   cold-regulated 413 inner membrane protein 1, chloroplastic 

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Top 50 coexpressed genes to COR413IM1 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly500   Starch and sucrose metabolism  6 137 6.03
 sly1250   Biosynthesis of nucleotide sugars  3 95 2.81
 sly520   Amino sugar and nucleotide sugar metabolism  3 122 2.50
 sly30   Pentose phosphate pathway  1 56 -
 sly10   Glycolysis / Gluconeogenesis  1 134 -

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sly:COR413IM1 (cold-regulated 413 inner membrane protein 1, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
COR413IM1
sly-r.5
for
COR413IM1
ath-u.4
for
COR314-TM2
ath-u.4
for
COR413IM1
gma-u.4
for
100306024
ppo-u.4
for
18095285
mtr-u.4
for
11408207
osa-u.4
for
4339637
1 LOC101258672 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 101258672 4.8 5.2
 1.2
 1.2
 1.1
-0.1
 0.2
0.1
 0.7
 0.9
2 LOC101250071 CASP-like protein 4A3 101250071 4.7 5.1
 1.2
0.2
 0.2
-0.3
 3.9
2.5
 0.5
-0.4
 2.1
0.2
 0.7
0.6
3 LOC543968 ADP-glucose pyrophosphorylase small subunit 543968 4.6 4.8
 2.8
 0.8
 1.7
1.2
 2.3
 3.2
2.0
 6.5
3.4
4 LOC101261555 non-lysosomal glucosylceramidase-like 101261555 4.4 4.8
 1.2
 0.8
1.0
0.8
 -0.6
 1.1
5 AgpL1 ADP-glucose pyrophosphorylase large subunit 544283 4.3 4.3
 3.2
1.9
 2.3
2.0
 1.3
1.2
 3.9
1.6
 2.2
1.8
 4.8
1.5
6 LOC101260331 S-formylglutathione hydrolase 101260331 4.3 4.4
 0.3
 -0.1
 2.3
2.3
 3.2
 1.7
0.9
 1.6
7 LOC101267287 phosphoglucomutase, chloroplastic 101267287 4.2 4.5
 2.2
 0.6
 1.8
1.6
 2.6
2.4
 3.9
 3.8
8 AGO4A argonaute 4A 101256023 4.2 4.6
 0.1
-0.3
 0.0
-0.5
 0.9
0.2
 1.9
1.4
 1.9
0.9
 1.4
-0.1
9 CBL1 calcineurin B-like 1 100820708 4.1 4.8
 0.8
-0.4
 -0.1
-0.4
 -0.4
 0.2
0.1
 -0.5
 0.4
10 LOC101268420 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 101268420 4.0 4.2
 5.2
2.9
 3.4
1.3
 0.5
0.4
 0.6
 3.4
 2.0
11 LOC101244357 thioredoxin-like 2-1, chloroplastic 101244357 4.0 4.2
 2.5
1.8
 1.3
0.6
 2.2
1.5
 1.9
-0.6
 1.2
 -0.2
12 LOC104649154 (+)-neomenthol dehydrogenase-like 104649154 3.9 4.1
 0.6
-0.1
 0.4
-0.8
 1.8
0.9
 1.3
1.0
 1.6
0.9
 1.7
0.5
13 ABCG28 ABC transporter G family member 28 101265507 3.9 4.3
 -0.4
 0.4
 0.7
0.4
 3.9
2.3
 -0.4
 1.5
14 LOC101254189 outer envelope pore protein 37, chloroplastic 101254189 3.9 4.1
 1.3
 0.3
 1.9
 1.4
0.5
 1.0
 2.8
-0.3
15 LOC101249741 isoamylase 1, chloroplastic 101249741 3.9 4.2
 1.9
 1.3
 0.9
 2.0
0.8
 3.2
 1.5
16 LOC101245056 uncharacterized LOC101245056 101245056 3.9 4.2
 0.6
 0.4
 0.8
 3.4
2.8
 1.8
 -0.4
17 LOC101257099 uncharacterized LOC101257099 101257099 3.8 4.0
 -1.0
-2.0
 -0.1
-0.8
 0.0
-0.6
 -0.0
-0.5
 -0.6
 0.7
18 LOC101244531 peptidyl-prolyl cis-trans isomerase CYP40-like 101244531 3.8 4.4
 0.5
 0.2
 -0.4
-1.0
 1.6
1.0
 -0.2
-0.8
 0.4
0.1
19 LOC101259959 uncharacterized LOC101259959 101259959 3.8 4.0
 0.9
0.4
 0.4
-0.3
 0.1
-0.7
 0.6
0.6
 1.0
-0.3
 1.0
20 LOC101258706 protein DETOXIFICATION 46, chloroplastic-like 101258706 3.8 3.9
 3.8
-0.8
 1.0
-1.2
 0.2
-0.4
 1.7
-0.8
 1.3
0.8
 0.7
21 LOC101254554 protein DETOXIFICATION 40 101254554 3.8 4.0
 -1.0
 -1.4
 0.2
-0.1
 0.2
0.1
 1.1
-2.0
 1.5
1.5
22 LOC101261339 bifunctional purple acid phosphatase 26 101261339 3.7 3.9
 -0.7
 -1.3
 0.2
 1.4
0.2
 2.2
 0.6
23 LOC101249001 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 101249001 3.7 3.4
 2.8
1.7
 1.6
0.6
 1.9
 1.1
1.0
 2.0
 3.0
0.3
24 LOC101250326 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 101250326 3.7 4.1
 1.1
0.0
 0.5
0.4
 -0.2
-0.2
 1.1
1.1
 2.9
0.3
 1.3
-0.1
25 LOC101258187 mavicyanin 101258187 3.6 3.8
 0.6
 0.1
 1.8
1.0
 -0.4
-1.0
 0.1
0.1
 1.3
26 LOC101266909 uncharacterized LOC101266909 101266909 3.6 3.8
 0.3
 0.4
 0.8
-1.0
 1.7
 1.1
-0.1
 1.1
0.9
27 LOC101246202 uncharacterized LOC101246202 101246202 3.6 4.0
 2.0
 0.6
 3.1
2.8
 3.8
 2.9
1.7
 2.4
28 HYD2 delta14-sterol reductase 100750253 3.6 3.6
 1.4
 0.0
 0.2
 0.8
 0.9
 1.0
0.8
29 LOC101266861 sodium-dependent phosphate transport protein 1, chloroplastic 101266861 3.6 3.9
 1.3
0.6
 1.3
-0.1
 -0.1
-0.7
 1.9
1.8
 1.7
1.5
 1.4
-0.8
30 LOC101252931 protein DETOXIFICATION 45, chloroplastic 101252931 3.6 3.8
 0.2
 0.7
 1.2
1.0
 1.1
0.8
 0.3
 0.7
31 LOC101249956 alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 101249956 3.6 3.4
 -0.2
 -0.6
 2.2
0.1
 -0.1
32 LOC101258811 F-box/FBD/LRR-repeat protein At1g13570 101258811 3.5 3.7
 -0.6
 -1.2
 2.3
0.1
 1.8
-0.0
 0.8
0.4
 0.6
33 CCD1A carotenoid cleavage dioxygenase 1A 543935 3.5 3.4
 1.7
 1.2
 1.1
 3.0
1.0
 0.7
-1.0
 -0.6
34 LOC101253241 RING finger superfamily protein 101253241 3.5 3.5

3.3
2.3
0.3
35 LOC101251334 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic 101251334 3.5 4.0
 2.8
 0.1
 1.9
 1.3
 0.1
 -0.2
36 LOC101253414 uncharacterized LOC101253414 101253414 3.5 3.7
 3.4
 1.4
 3.2
3.1
 0.8
 0.2
-0.8
 0.6
0.3
37 LOC101255139 sugar transporter ERD6-like 5 101255139 3.5 3.5
 1.3
0.5
 1.7
1.0
 1.1
0.5
 1.1
1.1
 0.5
-1.1
 0.6
-0.2
38 LOC101260954 uncharacterized LOC101260954 101260954 3.5 3.6
 0.4
-0.0
 0.8
-0.9
 1.0
0.3
 0.6
 3.3
39 LOC101246821 uncharacterized LOC101246821 101246821 3.4 3.1
 2.0
1.5
 2.3
1.6
 0.7
0.5
 3.1
1.3
 3.3
0.9
 1.4
1.3
40 LOC101266721 ninja-family protein AFP3 101266721 3.4 3.9
 1.3
-0.5
 1.2
0.8
 0.6
-0.2
 1.2
0.4
 2.1
0.1
 1.2
0.5
41 LOC101246120 uncharacterized protein At1g76660 101246120 3.4 3.9
 -0.9
 0.1
 1.6
1.5
 0.0
-0.3
 -0.8
 0.3
-0.3
42 LOC101248467 L-Ala-D/L-amino acid epimerase 101248467 3.4 3.8
 0.3
 -0.3
 -1.1
-1.5
 -0.0
 1.5
 0.9
43 LOC101249213 thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 101249213 3.4 3.5
 0.8
 0.9
 0.0
-0.1
 0.9
 2.1
 0.5
44 LOC778267 red chlorophyll catabolite reductase, chloroplastic 778267 3.4 3.5
 2.3
 0.2
 4.4
 0.7
-0.4
 2.2
 0.9
0.7
45 LOC101268765 probable polygalacturonase 101268765 3.4 3.5
 1.2
0.6
 1.1
0.8
 1.2
0.7
 0.7
-0.3
 2.6
1.9
 0.1
0.0
46 LOC101255593 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 101255593 3.3 3.6
 0.7
 0.3
 -1.1
 0.0
 1.5
 -0.8
47 LOC101248731 zinc finger protein JACKDAW 101248731 3.3 3.6
 1.2
-0.5
 2.3
0.9
 0.7
0.6
 1.9
0.9
 2.7
2.0
 -0.4
-0.7
48 LOC101263299 protein NUCLEAR FUSION DEFECTIVE 4 101263299 3.3 3.3
 0.9
 0.2
 0.4
0.4
 1.9
1.0
 1.2
-1.6
 0.2
-0.6
49 PIIGLB1 PII-like protein 100736437 3.3 3.6
 2.9
 1.1
 3.1
0.6
 1.0
 3.3
 0.5
50 LOC101261466 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 101261466 3.3 3.4
 1.3
0.8
 0.5
-0.6
 0.1
0.1
 -0.2
-0.6
 0.7
-1.6
 1.5
0.4
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