Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101268578   mediator of RNA polymerase II transcription subunit 33A-like 
 sly-r.5   101268578   mediator of RNA polymerase II transcription subunit 33A-like 
 sly-u.4   101260265   mediator of RNA polymerase II transcription subunit 33A 
 sly-u.4   101249759   mediator of RNA polymerase II transcription subunit 33A-like 
 ath-u.4   REF4   reduced epidermal fluorescence 4 
 ath-u.4   RFR1   REF4-related 1 
 gma-u.4   100785972   mediator of RNA polymerase II transcription subunit 33B 
 gma-u.4   100782680   mediator of RNA polymerase II transcription subunit 33A 
 gma-u.4   100812937   mediator of RNA polymerase II transcription subunit 33A 
 ppo-u.4   7458250   mediator of RNA polymerase II transcription subunit 33B 
 ppo-u.4   7457991   mediator of RNA polymerase II transcription subunit 33B 
 ppo-u.4   7454243   mediator of RNA polymerase II transcription subunit 33A 
 mtr-u.4   25488025   mediator of RNA polymerase II transcription subunit 33B 
 mtr-u.4   11440359   mediator of RNA polymerase II transcription subunit 33A 
 osa-u.4   4342710   mediator of RNA polymerase II transcription subunit 33A 

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Top 50 coexpressed genes to 101268578 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly3015   mRNA surveillance pathway  3 124 2.48
 sly4136   Autophagy - other  2 36 2.47
 sly514   Other types of O-glycan biosynthesis  1 11 -
 sly520   Amino sugar and nucleotide sugar metabolism  1 136 -
 sly4120   Ubiquitin mediated proteolysis  2 140 -

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sly:LOC101268578 (mediator of RNA polymerase II transcription subunit 33A-like) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101268578
sly-r.5
for
101268578
sly-u.4
for
101260265
sly-u.4
for
101249759
ath-u.4
for
REF4
ath-u.4
for
RFR1
gma-u.4
for
100785972
gma-u.4
for
100782680
gma-u.4
for
100812937
ppo-u.4
for
7458250
ppo-u.4
for
7457991
ppo-u.4
for
7454243
mtr-u.4
for
25488025
mtr-u.4
for
11440359
osa-u.4
for
4342710
1 LOC101263805 uncharacterized LOC101263805 101263805 6.8 7.2
 1.5
 1.5
 0.3
 2.3
 3.0
 -0.1
 0.7
 3.6
2.5
 4.4
3.8
 0.2
-0.2
 3.4
 2.0
 -0.1
2 LOC101252827 uncharacterized LOC101252827 101252827 6.3 6.7
 2.0
 0.7
 4.1
 2.7


1.8
 1.0
 1.4
 3.2
 3.4
 0.9
3 LOC101260020 protein furry homolog-like 101260020 6.3 6.5
 2.4
1.7
 3.4
1.6
 4.5
 2.9
 4.4
4.3
 1.0
0.9
 2.2
1.6
 2.8
 2.9
 2.5
 3.1
 3.6
 2.8
4 LOC101249326 protein RIK 101249326 6.2 6.7
 2.5
 1.5
 3.4
 1.8
 2.3
2.0
 0.3
-0.0
 1.6
1.2
 2.8
 2.5
 2.7
 3.6
 3.2
 0.7
5 LOC101260644 vacuolar protein sorting-associated protein 8 homolog 101260644 5.8 6.1
 2.7
 2.2
 7.3
 0.6
 1.9
0.4
 2.7
1.9
 2.9
2.2
 3.4
3.0
 1.2
1.0
 1.7
1.0
 2.0
 3.1
 1.7
6 LOC101248472 serine/threonine-protein kinase VPS15 101248472 5.7 6.0
 2.6
 1.5
 2.0
 1.0
 4.9
4.4
 2.0
0.9
 1.9
0.7
 1.6
 0.7
 0.8
 3.2
 3.1
 1.8
7 LOC101267449 TNF receptor-associated factor homolog 1b-like 101267449 5.7 5.7
 2.9
2.1
 0.6
0.3
 0.2
0.0
 1.8
0.6
 4.6
3.6
 1.0
0.9
 2.3
1.6
 4.3
3.5
 5.2
2.1
 0.5
-0.4
 4.3
3.0
 3.4
3.0
 -0.1
8 LOC101266159 piezo-type mechanosensitive ion channel homolog 101266159 5.6 6.0
 0.9
 0.2
 5.9
 1.1
 0.4
0.3
 1.7
1.1
 1.4
0.9
 1.7
 2.4
 1.1
 3.6
0.5
 2.5
1.1
 1.3
9 LOC101268214 phospholipase SGR2 101268214 5.6 5.8
 2.4
 0.6
 1.2
 1.5
 3.4
 -0.2
 0.8
 2.2
0.9
 0.9
0.7
 0.2
-0.5
 2.8
 1.9
 -0.5
10 XRN4 protein ETHYLENE-INSENSITIVE5 100147714 5.6 5.9
 1.0
 -0.0
 5.4
 1.3
 3.8
2.6
 1.3
1.2
 1.9
1.3
 2.9
2.8
 1.9
1.1
 1.8
1.0
 4.6
1.9
 2.7
2.0
 1.0
11 LOC101264813 F-box/LRR-repeat protein At5g63520 101264813 5.5 5.9
 1.9
1.1
 2.7
0.7
 1.2
 1.1
 2.6
1.6
 0.3
-0.2
 1.3
1.1
 2.0
0.6
 1.5
1.4
 0.8
0.5
 1.2
 1.6
12 LOC101253141 F-box/LRR-repeat protein At5g63520 101253141 5.4 5.6
 1.9
1.1
 2.7
0.7
 1.2
 1.1
 2.6
1.6
 0.3
-0.2
 1.3
1.1
 2.0
0.6
 1.5
1.4
 0.8
0.5
 1.2
 1.6
13 LOC101249932 uncharacterized LOC101249932 101249932 5.4 5.7
 0.6
 1.2
 4.1
 1.9
 3.1
2.4
 1.0
-0.2
 1.5
1.5
 2.8
 1.5
 0.9
 2.5
2.0
 2.7
2.7
 0.7
14 LOC101267935 CCR4-NOT transcription complex subunit 1 101267935 5.4 5.6
 2.2
 2.5
 3.8
 3.4
 5.0
4.3
 0.6
0.3
 2.4
0.6
 2.9
2.6
 2.4
1.0
 2.3
2.2
 3.5
 4.7
 2.0
-0.2
15 LOC101258480 mRNA-capping enzyme-like 101258480 5.4 5.5
 1.3
0.8
 0.8
0.2
 2.9
0.4
 1.6
1.3
 3.8
3.6
 1.1
0.8
 1.8
1.7
 2.1
1.5
 2.0
0.5
 0.8
0.2
 2.1
1.9
 0.9
0.8
 1.8
1.7
16 LOC101263144 E3 ubiquitin-protein ligase KEG 101263144 5.3 5.2
 0.9
 0.2
 2.1
 0.2
 2.1
1.4
 2.3
2.2
 1.9
1.4
 2.1
1.4
 2.5
0.6
 2.5
1.1
 1.6
 2.3
 0.6
17 LOC101264968 uncharacterized LOC101264968 101264968 5.3 5.7
 1.6
1.0
 0.5
-0.2
 1.1
 -0.8
 2.5
0.3
 0.7
0.2
 0.3
0.3


0.6
0.5
 0.3
-0.2
18 LOC101244540 E3 ubiquitin-protein ligase UPL5-like 101244540 5.3 5.3
 1.7
0.5
 1.2
0.2
 0.3
 -0.4
 3.8
3.2
 0.1
-0.0
 -0.1
-0.1
 2.3
2.2
 1.6
1.2
 -0.0
-0.0
 2.3
 2.1
 2.6
19 LOC101259295 serine/threonine-protein kinase TOR 101259295 5.2 5.5
 1.4
 1.7
 3.6
 1.5
 3.6
3.3
 1.5
1.1
 2.7
2.2
 3.2
2.5
 1.2
0.9
 1.5
1.0
 3.4
 4.2
 1.5
20 LOC101267523 uncharacterized LOC101267523 101267523 5.2 5.7
 1.4
 2.5
 3.1
 1.6
 3.8
3.7
 -0.1
-0.2
 1.3
0.4
 2.1
 0.8
 0.7
 3.4
 1.9
 0.5
21 LOC101262196 DENN domain and WD repeat-containing protein SCD1 101262196 5.1 5.1
 1.9
 1.4
 1.7
 2.2
 5.9
 0.5
 2.0
 4.9
2.1
 3.7
1.9
 0.9
0.9
 1.5
 3.6
 0.7
22 LOC101246936 uncharacterized LOC101246936 101246936 5.1 5.4
 1.6
1.4
 1.9
1.0
 1.2
0.6
 2.8
0.8
 3.6
2.9
 0.8
0.4
 2.3
2.2
 2.0
1.9
 2.2
1.7
 1.5
1.4
 2.6
2.3
 2.0
1.4
 1.3
23 LOC101257338 tyrosyl-DNA phosphodiesterase 1 101257338 5.1 5.3
 -0.2
 0.6
 0.4
 1.1
 -0.7
 -0.9
 -0.1
 3.0
 2.5
 0.3
 -0.8
 0.1
 0.6
24 LOC101245650 AF4/FMR2 family member 4 101245650 5.0 5.3
 1.0
 1.2
 2.5
 1.7
 0.8
 -0.1
 0.8
 3.8
 2.2
 2.0
 3.6
 1.9
 1.2
25 LOC101257890 E3 ubiquitin-protein ligase UPL4 101257890 5.0 5.2
 1.1
 0.7
 1.9
 0.9
 4.3
3.5
 1.6
1.1
 1.8
1.7
 2.5
1.9
 2.9
0.2
 1.8
1.2
 2.7
 3.3
 2.1
26 LOC101260523 internalin-A 101260523 5.0 4.8
 2.0
1.6
 -0.3
-0.5
 1.6
 -0.6
 2.1
1.9
 2.2
2.2
 0.9
0.7
 0.5
 0.4
 1.4
 2.1
1.8
 2.5
2.5
 1.2
0.2
27 LOC101252266 polyadenylation and cleavage factor homolog 4 101252266 5.0 5.1
 2.0
 -0.4
 3.9
 1.9
 3.4
3.1
 -0.6
-1.0
 0.1
-1.4
 5.4
4.0
 5.9
2.6
 0.2
-0.8
 0.8
 0.5
 0.5
28 LOC101252517 uncharacterized LOC101252517 101252517 5.0 5.1
 1.9
 1.6
 3.7
 2.8
 5.2
3.4
 0.7
0.5
 1.6
1.4
 3.8
 3.7
 1.9
 2.4
 2.5
 2.4
29 LOC101248775 methyl-CpG-binding domain-containing protein 9 101248775 4.9 5.1
 1.0
 2.3
 4.4
 3.6
 3.3
3.1
 0.0
-0.1
 1.0
0.6
 2.7
 1.2
 1.8
 3.2
 3.2
 2.1
30 LOC101265885 protein CELLULOSE SYNTHASE INTERACTIVE 3-like 101265885 4.9 5.1
 0.3
-0.2
 1.3
0.5
 1.2
 2.3
 1.4
0.7
 0.1
0.0
 2.2
1.3
 1.8
 1.7
 2.3
 2.0
 3.0
 2.4
31 LOC101243934 telomere length regulation protein TEL2 homolog 101243934 4.9 5.3
 0.8
 1.0
 2.2
 1.3
 4.4
3.4
 1.1
0.7
 1.8
1.5
 2.5
 1.5
 -0.0
 1.0
 2.5
 1.3
0.5
32 LOC101250054 protein FAR1-RELATED SEQUENCE 3-like 101250054 4.9 5.0
 0.9
0.1
 0.9
0.8
 3.9
3.2
 1.9
1.7
 3.3
3.0
 1.5
0.7
 1.5
1.4
 2.6
2.6
 1.7
1.6
 1.0
0.3
 3.1
2.5
 3.6
1.5
 1.0
0.7
33 LOC101250484 integrator complex subunit 9 homolog 101250484 4.9 5.0
 1.1
 0.8
 0.7
 1.1
 1.7
 0.6
 1.7
 1.4
 0.7
 0.5
 -0.6
 -0.3
 0.0
34 LOC101250834 E3 ubiquitin-protein ligase UPL7 101250834 4.8 4.9
 2.2
 0.6
 3.3
 2.9
 2.1
1.5
 2.2
1.2
 1.9
1.4
 0.4
 1.6
 1.0
 2.7
 2.9
 0.3
35 LOC101259183 SUPPRESSOR OF ABI3-5 101259183 4.8 5.0
 2.2
 2.3
 3.7
 2.0
 2.2
1.5
 0.3
0.3
 2.3
1.8
 3.6
1.5
 3.0
2.1
 2.6
2.1
 2.2
 2.5
 1.5
36 LOC101252535 E3 ubiquitin-protein ligase MBR2 101252535 4.8 4.9
 2.4
2.0
 3.1
1.8
 5.0
2.5
 2.4
1.9
 4.1
3.8
 2.5
1.2
 3.4
2.3
 1.8
0.2
 3.6
0.3
 1.5
1.4
 3.4
1.4
 0.5
-0.2
 0.4
37 LOC101249638 protein ESMERALDA 1 101249638 4.8 4.9
 2.7
-1.0
 0.6
-0.3
 2.7
0.4
 1.8
1.4
 2.4
1.7
 0.8
-0.1
 1.1
0.5
 0.8
0.2
 -0.2
-0.3
 0.1
-0.7
 1.5
1.5
 1.3
0.7
 1.1
-0.3
38 LOC101253869 SAC3 family protein B 101253869 4.8 4.9
 1.8
 1.5
 1.5
 2.4
 3.3
1.1
 -0.1
-0.4
 1.3
1.1
 3.7
 1.3
 1.1
 3.9
 1.8
 2.3
39 LOC101259622 polyadenylate-binding protein-interacting protein 4 101259622 4.8 4.7
 2.2
-0.8
 2.8
-0.1
 1.7
1.6
 1.5
-0.2
 3.5
2.9
 0.4
0.4
 0.9
0.9
 3.5
2.6
 1.6
0.7
 0.8
0.1
 2.4
2.2
 2.1
-2.0
 0.8
40 LOC101246695 ranBP2-type zinc finger protein At1g67325 101246695 4.7 4.3
 0.9
 -0.5
 0.6
 -0.4
 1.7
1.6
 0.6
-0.0
 1.1
1.0
 2.5
 0.9
 1.3
 0.3
 0.7
 1.2
41 LOC101247558 uncharacterized LOC101247558 101247558 4.7 4.9
 2.1
0.0
 1.5
-0.7
 7.4
 1.0
 4.8
3.9
 1.7
1.5
 1.7
1.6
 5.0
4.6
 3.4
2.8
 2.1
2.0
 3.7
 4.0
 2.3
42 LOC101257828 peroxisomal leader peptide-processing protease 101257828 4.7 4.9
 1.3
 1.5
 1.8
 2.0
 2.4
 1.9
 3.3
 3.2
1.9
 2.8
1.8
 0.4
0.3
 1.7
 3.2
 0.3
43 LOC101250651 probable splicing factor 3A subunit 1 101250651 4.7 4.8
 1.6
1.4
 2.2
1.4
 4.4
2.5
 1.0
0.1
 4.7
3.8
 -0.9
-0.9
 0.1
-0.1
 2.8
2.4
 3.4
1.3
 1.1
0.8
 3.4
 0.5
 0.1
44 LOC101245341 L-arabinokinase-like 101245341 4.7 4.4
 2.4
2.3
 1.5
-0.2
 3.9
 1.5
 2.5
1.4
 1.4
0.8
 0.5
-0.0
 1.5
 0.4
 0.4
 1.6
 1.8
 1.4
-0.0
45 LOC101260404 TNF receptor-associated factor homolog 1b-like 101260404 4.7 4.7
 2.9
2.1
 0.6
0.3
 0.2
0.0
 1.8
0.6
 4.6
3.6
 1.0
0.9
 2.3
1.6
 4.3
3.5
 5.2
2.1
 0.5
-0.4
 4.3
3.0
 3.4
3.0
 -0.1
46 LOC101267524 ceramide kinase 101267524 4.6 4.8
 1.3
 0.5
 2.7
 -0.3
 -0.2
-0.3
 0.1
-0.4
 0.5
0.1
 2.0
 1.0
 0.2
 0.6
 1.2
 -0.5
47 LOC101265489 histone-lysine N-methyltransferase 2C-like 101265489 4.6 4.7












48 LOC101262246 uncharacterized LOC101262246 101262246 4.6 4.8
 1.4
 2.2
 2.3
 1.7
 1.9
 0.1
 1.5
 2.6
 1.3
 1.4
 2.6
 1.9
 1.5
49 spy SPY protein 543775 4.5 4.1
 1.4
 1.2
 2.8
 3.7
 6.0
5.4
 0.6
0.3
 1.1
0.9
 3.1
2.6
 1.2
0.8
 0.4
-0.2
 3.4
 2.1
 1.7
50 LOC101246524 uncharacterized LOC101246524 101246524 4.5 4.8
 3.8
0.5
 1.7
0.0
 2.8
 2.3
 5.1
4.5
 1.6
1.5
 1.4
1.1
 1.7
1.4
 2.2
1.7
 1.4
1.0
 3.6
 2.4
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