Orthologous genes in OrthoFinder**

Species Gene Description
 osa-r.5   4352606   uncharacterized LOC4352606 
 osa-u.4   4352606   uncharacterized LOC4352606 
 osa-m.8   4352606   uncharacterized LOC4352606 
 ath-u.4   AT5G08050   wiskott-aldrich syndrome family protein, putative (DUF1118) 
 gma-u.4   100787404   uncharacterized LOC100787404 
 gma-u.4   100500269   uncharacterized LOC100500269 
 sly-u.4   101256756   uncharacterized LOC101256756 
 ppo-u.4   18105752   uncharacterized LOC18105752 
 mtr-u.4   11445773   uncharacterized LOC11445773 

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Top 50 coexpressed genes to 4352606 (osa-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa195   Photosynthesis  17 76 28.00
 osa196   Photosynthesis - antenna proteins  3 15 15.12
 osa860   Porphyrin metabolism  2 42 2.45
 osa10   Glycolysis / Gluconeogenesis  1 143 -
 osa190   Oxidative phosphorylation  2 156 -

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osa:LOC4352606 (uncharacterized LOC4352606) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-r.5
for
4352606
osa-u.4
for
4352606
osa-m.8
for
4352606
ath-u.4
for
AT5G08050
gma-u.4
for
100787404
gma-u.4
for
100500269
sly-u.4
for
101256756
ppo-u.4
for
18105752
mtr-u.4
for
11445773
1 LOC4347395 photosystem I reaction center subunit V, chloroplastic 4347395 Os09g0481200 9.7 9.1
 8.5
 3.4
 4.8
4.0
 3.7
3.0
 4.1
 3.6
3.4
 3.8
2 LOC4342370 oxygen-evolving enhancer protein 2, chloroplastic 4342370 Os07g0141400 8.5 8.7
 8.8
 5.3
 3.9
3.3
 7.9
5.7
 4.5
 3.7
3.6
 2.7
1.4
3 LOC4344539 photosystem II core complex proteins psbY, chloroplastic 4344539 Os08g0119800 7.8 9.3
 10.8
 6.2
 5.7
3.8
 5.6
5.1
 3.3
 3.8
3.5
 4.4
2.2
4 LOC4343189 protein CURVATURE THYLAKOID 1B, chloroplastic 4343189 Os07g0469100 7.5 5.7
 3.8
 5.9
 6.2
4.1
 7.4
6.2
 3.2
 4.3
2.2
 3.0
1.0
5 LOC4330608 calcium sensing receptor, chloroplastic 4330608 Os02g0729400 7.4 6.7
 5.9
 4.0
 2.9
1.1
 6.1
3.6
 4.1
 2.8
 1.6
0.4
6 LOC9269218 uncharacterized LOC9269218 9269218 Os07g0673550 7.0 5.2
6.2
 5.8
4.3
 4.8
4.6
 3.5
3.1
 3.4
3.3
 2.5
2.1
7 LOC4332431 ATP synthase subunit b', chloroplastic 4332431 Os03g0278900 6.9 7.0
 7.0
 4.4
 3.1
 3.3
 4.7
2.6
 5.0
3.7
 2.6
8 LOC4344899 photosystem II 10 kDa polypeptide, chloroplastic 4344899 Os08g0200300 6.9 6.6
 6.2
 5.6
 2.8
2.1
 4.3
3.0
 7.7
0.6
 2.3
0.8
 3.3
9 LOC4340704 protein CURVATURE THYLAKOID 1A, chloroplastic 4340704 Os06g0264800 6.7 7.7
 8.7
 4.7
 5.1
4.8
 2.7
2.7
 4.5
2.7
 4.0
3.0
 2.6
10 LOC4330711 geranylgeranyl diphosphate reductase, chloroplastic-like 4330711 OSNPB_020744900 6.7 5.5
 4.3
 6.4
 2.8
2.4
 2.8
2.7
 1.3
0.8
 3.2
2.4
 1.7
-0.5
11 LOC4343515 oxygen-evolving enhancer protein 3, chloroplastic-like 4343515 OSNPB_070544800 6.5 7.8
 9.1
 7.6
3.6
 4.8
4.0
 5.8
5.0
 2.9
 2.8
2.5
 2.5
12 LOC4332805 uncharacterized LOC4332805 4332805 Os03g0343900 6.2 8.8
 11.5





13 LOC4351694 photosystem I reaction center subunit N, chloroplastic 4351694 Os12g0189400 6.1 6.9
 7.7
 7.3
 4.5
3.8
 4.7
3.5
 3.4
 3.1
2.3
 4.0
14 LOC4329751 protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic 4329751 Os02g0575500 6.0 5.2
 4.5
 5.2
 1.7
1.7
 3.2
2.5
 0.9
 2.7
2.7
 2.2
0.1
15 LOC4327150 photosystem II reaction center W protein, chloroplastic-like 4327150 OSNPB_010773700 5.9 4.5
5.0
 3.8
3.7
 4.1
3.9
 4.6
2.7
 4.3
2.6
 3.0
2.0
16 LOC4331128 uncharacterized LOC4331128 4331128 Os02g0815300 5.8 7.7
 9.7
2.2
1.7
 4.7
3.5
 5.0
 4.8
 2.5
17 LOC4352085 photosystem I reaction center subunit XI, chloroplastic 4352085 Os12g0420400 5.8 4.4
 3.1
 3.9
 4.8
3.7
 3.8
3.5
 5.8
3.6
 4.1
0.5
 3.8
18 LOC4349004 protochlorophyllide reductase B, chloroplastic-like 4349004 OSNPB_100496900 5.8 5.4
 5.0
 4.7
2.9
 4.3
3.8
 5.7
1.4
 2.1
0.7
 2.0
1.2
 1.9
19 LOC4328000 ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like 4328000 Os02g0103800 5.7 4.5
 3.3
 5.0
2.8
 3.9
3.8
 5.0
3.1
 2.3
0.5
 3.8
3.1
 3.6
20 LOC4333882 zinc finger protein CONSTANS-LIKE 16 4333882 Os03g0711100 5.7 6.3
 6.9





21 LOC4336028 chlorophyll a-b binding protein CP24, chloroplastic 4336028 Os04g0457000 5.7 4.9
 4.1
 4.6
 4.0
3.6
 5.5
3.8
 2.9
2.6
 4.4
1.9
 1.1
22 LOC4343070 photosystem I reaction center subunit IV, chloroplastic 4343070 Os07g0435300 5.6 7.0
 8.5
 4.7
4.3
 3.6
3.4
 5.3
4.2
 3.8
2.9
 4.8
 3.6
2.5
23 LOC4343583 chlorophyll a-b binding protein CP29.1, chloroplastic 4343583 Os07g0558400 5.6 6.3
 7.0
 3.9
2.2
 3.7
3.4
 3.7
3.0
 4.2
 2.9
2.0
 5.2
3.2
24 LOC4329783 photosystem II 5 kDa protein, chloroplastic 4329783 Os02g0581100 5.6 7.3
 9.1
 5.4
 4.2
4.2
 4.3
4.2
 -0.3
 5.2
3.4
 3.6
3.4
25 LOC4339593 photosystem I reaction center subunit VI, chloroplastic-like 4339593 OSNPB_050560000 5.5 8.7
 11.9
 6.0
4.4
 4.4
3.9
 5.9
3.7
 4.8
2.2
 3.0
 2.6
26 LOC4344738 RNA polymerase sigma factor sigA 4344738 Os08g0163400 5.4 4.3
 3.3
 4.2
 3.2
2.5
 3.8
2.7
 2.1
1.4
 2.1
0.3
 2.4
27 LOC4348208 pentatricopeptide repeat-containing protein MRL1, chloroplastic 4348208 Os10g0181200 5.4 4.2
 3.0
 4.4
 1.4
1.1
 0.6
-0.3
 0.9
 -0.2
 2.6
28 LOC4339833 plastocyanin, chloroplastic-like 4339833 OSNPB_060101600 5.3 5.3
 5.3
 6.4
2.7
 4.3
4.2
 5.4
4.2
 2.4
 4.5
2.5
 5.4
29 LOC4338302 protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 4338302 Os05g0291700 5.3 3.2
 1.1
 3.7
 4.8
4.1
 4.8
2.9
 2.0
 2.5
2.2
 2.4
30 LOC4332887 transcription termination factor MTEF1, chloroplastic 4332887 Os03g0360600 5.3 6.9
 8.5
 1.4
 2.4
2.3
 1.9
1.5
 0.3
 -0.3
 0.6
31 LOC4342404 photosystem I reaction center subunit psaK, chloroplastic 4342404 Os07g0148900 5.2 7.1
 9.0
 5.8
 4.7
4.3
 4.6
4.0
 4.4
 3.9
2.0
 2.3
32 LOC4338729 UPF0603 protein Os05g0401100, chloroplastic-like 4338729 OSNPB_050401100 5.1 5.8
 6.5
 4.5
 4.4
3.5
 4.8
4.2
 3.3
 3.5
1.8
 4.6
33 LOC4324479 oxygen-evolving enhancer protein 1, chloroplastic 4324479 Os01g0501800 5.1 7.4
 9.6
 6.2
4.5
 4.4
4.4
 7.3
4.5
 3.5
 3.2
3.1
 3.6
3.4
34 LOC4332745 photosystem II repair protein PSB27-H1, chloroplastic 4332745 Os03g0333400 5.1 6.1
 7.1
 6.1
 4.5
4.3
 3.9
2.8
 1.7
 3.0
1.9
 1.7
35 LOC4332516 uncharacterized LOC4332516 4332516 Os03g0293100 4.9 5.2
 5.4
 3.8
 1.9
1.3
 2.6
0.9
 3.1
 2.6
 3.2
36 LOC4327654 uncharacterized LOC4327654 4327654 Os01g0585300 4.9 5.1
 5.4
 10.7
 3.4
3.1
 4.3
4.0
 5.4
 1.7
0.7
 1.9
37 LOC4330408 pentatricopeptide repeat-containing protein At1g31920 4330408 Os02g0697500 4.8 5.7
 6.7
3.6
2.7
 7.7
4.5
 1.3
 1.3
 3.0
38 LOC4349652 uncharacterized LOC4349652 4349652 Os11g0127800 4.8 5.2
 5.7
 3.1
 2.8
 2.7
 1.5
 4.2
2.0
 0.5
39 LOC4343604 chlorophyll a-b binding protein of LHCII type III, chloroplastic 4343604 Os07g0562700 4.7 4.6
 4.6
 4.1
 3.7
2.9
 4.0
3.2
 3.0
2.2
 2.3
 1.8
40 LOC4331123 glutathionyl-hydroquinone reductase YqjG 4331123 Os02g0814800 4.7 2.4
 0.1
 -0.6
 0.4
 1.2
 0.8
 0.8
 0.9
41 LOC4325465 thylakoid lumenal 15 kDa protein 1, chloroplastic 4325465 Os01g0144100 4.7 2.9
 1.1
 3.6
 2.6
1.9
 1.9
1.7
 5.8
 0.6
0.5
 1.8
42 LOC9270776 ATP synthase delta chain, chloroplastic 9270776 Os02g0750100 4.7 3.6
9.5
 4.5
3.2
 3.9
3.7
 3.5
 3.0
0.1
 3.0
43 LOC4348287 uncharacterized LOC4348287 4348287 Os10g0213700 4.7 3.7
 2.8
 3.4
 3.5
 3.2
 1.7
 2.0
 1.7
44 LOC4340391 putative peroxiredoxin Q, chloroplastic 4340391 OSNPB_060196300 4.6 3.1
 1.6
 5.6
 4.1
2.9
 2.7
2.0
 2.9
 2.3
0.6
 2.5
45 LOC9269069 protein CHUP1, chloroplastic 9269069 Os12g0105300 4.6 2.2
 -0.2
 -0.3
 0.7
0.6
 0.7
-0.0
 -0.2
 0.8
 0.7
46 LOC4341930 uncharacterized LOC4341930 4341930 Os06g0694800 4.6 3.7
 2.9
 9.3
 1.2
1.0
 3.1
1.0
 5.7
 3.3
 4.4
47 LOC4349897 fructose-bisphosphate aldolase, chloroplastic-like 4349897 OSNPB_110171300 4.5 3.2
 1.9
 3.5
3.1
 4.0
3.1
 6.0
3.1
 5.7
3.5
 3.9
3.8
 2.8
2.3
48 LOC4328925 protein THYLAKOID RHODANESE-LIKE, chloroplastic-like 4328925 Os02g0257300 4.5 5.2
 5.9
 4.6
 3.2
2.9
 4.2
3.7
 2.7
2.4
 4.2
2.0
 1.7
49 LOC4332867 sanguinarine reductase 4332867 Os03g0355900 4.5 2.6
 0.8
 2.0
 2.0
0.6
 3.0
2.3
 2.2
 2.8
 1.3
50 LOC4346192 peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic 4346192 Os08g0541400 4.5 3.6
 2.6
 5.0
 2.9
2.1
 2.7
2.1
 2.4
 1.3
1.2
 2.2
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