Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.4   101250582   probable rhamnogalacturonate lyase B 
 sly-r.5   101250582   probable rhamnogalacturonate lyase B 
 sly-u.4   101248195   probable rhamnogalacturonate lyase B 
 sly-u.4   101260634   rhamnogalacturonate lyase-like 
 sly-u.4   101261914   probable rhamnogalacturonate lyase B 
 ath-u.4   AT1G09910   Rhamnogalacturonate lyase family protein 
 ppo-u.4   7467219   probable rhamnogalacturonate lyase B 
 ppo-u.4   112327824   probable rhamnogalacturonate lyase B 
 ppo-u.4   7491976   rhamnogalacturonate lyase B 
 mtr-u.4   11422528   probable rhamnogalacturonate lyase B 
 mtr-u.4   11444270   rhamnogalacturonate lyase-like 
 osa-u.4   4349697   probable rhamnogalacturonate lyase B 

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Top 50 coexpressed genes to 101250582 (sly-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sly500   Starch and sucrose metabolism  3 137 2.36
 sly592   alpha-Linolenic acid metabolism  2 43 2.32
 sly52   Galactose metabolism  2 57 -
 sly4146   Peroxisome  2 95 -
 sly4144   Endocytosis  2 179 -

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sly:LOC101250582 (probable rhamnogalacturonate lyase B) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.4
for
101250582
sly-r.5
for
101250582
sly-u.4
for
101248195
sly-u.4
for
101260634
sly-u.4
for
101261914
ath-u.4
for
AT1G09910
ppo-u.4
for
7467219
ppo-u.4
for
112327824
ppo-u.4
for
7491976
mtr-u.4
for
11422528
mtr-u.4
for
11444270
osa-u.4
for
4349697
1 LOC101249329 tetraspanin-3 101249329 4.4 4.9
 0.1
-1.6
 -0.3
-0.8
 -1.7
-1.9
 0.2
 0.8
 -0.1
 -1.2
 1.2
 -0.1
 -0.1
2 LOC101266875 heavy metal-associated isoprenylated plant protein 26 101266875 4.1 4.1
 -0.1
 -0.6
 -0.2
 0.9
0.6
 1.0
1.0
 0.5
0.2
 0.9
-0.0
 1.2
0.0
 -0.7
-1.0
 0.5
-0.4
3 LOC101259280 ethylene-responsive transcription factor RAP2-7-like 101259280 4.0 4.2
 1.0
0.3
 1.2
0.7
 1.3
0.9
 0.1
-0.2
 0.6
0.4
 0.7
0.6
 0.4
0.4
 1.5
1.3
 1.1
0.4
 0.8
0.2
4 LOC101253895 WPP domain-interacting tail-anchored protein 2 101253895 3.9 4.2
 0.3
-0.9
 0.4
-0.2
 0.4
-1.1
 2.2
-1.6
 0.1
-0.4
 0.1
-1.0
 0.4
-0.6
 -0.4
-0.7
 0.1
-0.1
 0.0
-0.4
5 LOC101261537 nudix hydrolase 8 101261537 3.9 4.1
 0.2
-0.0
 0.1
-0.3
 0.3
-0.3
 -0.9
 -0.7
 -0.8
 -1.2
 -1.7
 0.2
 1.1
-0.4
6 LOC101249737 protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like 101249737 3.8 4.1
 -0.3
-1.7
 0.2
-0.6
 -0.3
-1.5
 0.6
 -0.2
-1.4
 -1.0
-1.3
 0.7
-0.2
 0.0
 -0.3
 0.0
-0.2
7 LOC101257813 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like 101257813 3.7 3.9
 0.0
-0.2
 -0.0
-0.6
 0.3
-0.1
 1.8
 1.2
0.1
 0.3
0.3
 -0.1
-0.1
 0.5
0.1
 0.4
0.0
 1.1
1.1
8 LOC101265590 nicotinamidase 1 101265590 3.5 3.6
 -0.1
-0.5
 1.0
0.1
 -0.3
-0.9
 0.7
 -0.3
-0.7
 -0.2
-0.4
 -0.6
-0.7
 -0.1
-0.8
 0.7
-1.4
 0.6
9 LOC101250469 uncharacterized LOC101250469 101250469 3.4 3.8
 0.8
 1.1
 0.7
 0.5
-0.2


1.4
0.6
 0.9
0.3
10 LOC101248295 alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 101248295 3.4 3.7
 1.5
0.6
 1.6
0.6
 0.6
0.4
 0.0
 -0.0
-1.2
 -0.6
-0.6
 -0.4
-0.7
 3.2
1.8
 0.9
-0.5
 -0.0
11 LOC101258035 short-chain dehydrogenase/reductase 2b 101258035 3.4 3.4
 0.2
 0.1
 -0.5
0.6
 -1.0
 -1.1

-0.6
12 LOC101247980 low-temperature-induced cysteine proteinase-like 101247980 3.3 3.5
 1.2
-0.1
 1.5
0.4
 0.4
-0.7
1.0
0.1
 0.0
-0.3
 -0.9
-1.1


13 LOC543856 WRKY transcription factor 37 543856 3.3 3.4
 0.9
 -0.2
 -0.3
2.0
 1.3
 0.8
 0.7
 -0.8
 -0.4
14 LOC101252154 peroxisomal membrane protein PMP22 101252154 3.2 2.9
 -0.2
-0.3
 0.3
-0.5
 -0.1
-0.4
 1.4
1.3
 0.5
 0.9
 0.2
 -0.3
-0.5
 0.3
-0.0
 0.5
0.1
15 ABCA3 ABC transporter A family member 3 101248567 3.2 3.4
 0.9
-0.5
 1.2
-0.2
 -0.1
-0.2
 1.3
0.0
 -0.6
-0.7
 -1.0
-1.1
 0.4
-0.6
 1.7
0.7
 1.5
0.2
 0.5
0.3
16 LOC101255122 protein TWIN LOV 1-like 101255122 3.2 3.7
 -0.0
-0.4
 0.1
-0.9
 0.3
-1.2
 -0.3
 0.2
-1.0
 0.4
-0.2
 0.0
-0.2
 0.7
 0.0
 -0.9
17 LOC101262894 EH domain-containing protein 1-like 101262894 3.1 3.3
 0.8
0.0
 0.2
-0.2
 -0.1
-0.3
 1.6
-0.6
 -0.2
-0.8
 0.3
-0.3
 0.1
-0.9
 1.0
0.5
 1.2
1.1
 0.4
0.2
18 LOC101256489 uncharacterized LOC101256489 101256489 3.1 3.4
 0.1
0.0
 0.7
0.2
 -0.2
-0.3
 1.7
0.2
 1.2
-0.6
 0.2
-0.4
 -0.2
-0.4
 -0.2
-0.7
 -0.1
-0.1
 -0.7
19 LOC101262081 linoleate 13S-lipoxygenase 2-1, chloroplastic 101262081 3.1 3.3
 0.6
0.4
 1.0
0.2
 1.2
0.8
 -0.7
 0.1
-0.1
 0.3
0.3
 0.8
-0.2
 1.8
1.5
 1.5
1.2
 0.8
0.4
20 LOC101254501 uncharacterized LOC101254501 101254501 3.0 3.0
 1.0
0.8
 0.7
0.6
 0.7
-0.2
 0.5


1.2
0.0
 2.1
-1.5
 0.1
0.1
21 LOC101252574 probable acetyltransferase NATA1-like 101252574 3.0 3.3
 0.7
-0.5
 0.5
-0.2
 -0.0
-0.1
 -0.2
-1.0
 -0.0
-0.4
 0.1
-0.7
 0.3
-0.0
 -2.2
 -1.9
 -0.2
22 LOC101267030 CASP-like protein 1F1 101267030 3.0 3.2
 1.4
0.1
 0.8
0.0
 2.1
-0.4
-0.6
-0.7
 0.9
0.2
 2.0
1.0
 -0.8
 0.6
23 LOC104645948 uncharacterized LOC104645948 104645948 3.0 3.2
 0.6
0.2
 0.6
0.6
 -0.2
-1.6
 0.9
0.3
 0.3
-0.4
 0.4
0.3
 0.8
-0.9
 0.1
 0.3
 0.6
0.3
24 LOC101266644 LIM domain-containing protein WLIM1 101266644 3.0 3.4
 0.4
-0.8
 1.5
0.2
 0.5
-0.1
0.5
-0.2
 0.9
-1.1
 -0.4
-0.4


25 LOC101265921 receptor protein kinase-like protein ZAR1 101265921 3.0 3.1
 0.9
 1.6
 0.1
 -0.4
 3.2
0.9
 1.6
1.1
 -0.6
-0.8
 1.6
1.3
 0.7
0.4
 0.7
0.5
26 LOC101252275 protein DETOXIFICATION 16 101252275 3.0 3.1
 1.3
0.0
 1.1
-0.6
 1.2
-0.9
-0.2
 -0.3
 -0.3


27 LOC101262603 protein arginine methyltransferase NDUFAF7 homolog, mitochondrial 101262603 2.9 3.4
 -0.5
 -0.2
 0.2
 0.2
 -0.0
 0.5
 -0.6
 0.5
 0.3
 0.6
28 LOC543698 beta-mannosidase 543698 2.9 3.1
 0.6
-0.0
 0.7
0.3
 1.0
0.9
 1.2
-0.2
 1.2
-0.2
 0.5
-0.8
 0.4
-1.5
 0.8
0.2
 1.3
0.9
 0.6
-0.8
29 opr3 12-oxophytodienoate reductase 3 543763 2.9 2.7
 -0.2
 0.8
 -0.7
 0.1
 0.3
-0.8
 -0.0
-0.4
 1.0
-0.3
 -1.7
 -1.0
 0.5
30 LOC101243668 BEL1-like homeodomain protein 9 101243668 2.9 3.0
 0.5
 -0.3
 0.9
0.9
0.7
 1.2
0.8
 -0.3
-0.7
 -0.6
 1.0
31 LOC101264050 universal stress protein PHOS32-like 101264050 2.9 2.9
 -0.2
-0.9
 0.3
-1.0
 -1.1
-1.3
 -0.6
 0.3
-0.3
 -0.4
-0.9
 0.7
-0.8
 3.0
-0.1
 0.7
-0.5
 0.1
-0.2
32 LOC101256779 peroxisomal nicotinamide adenine dinucleotide carrier 101256779 2.9 3.1
 0.3
 0.1
 -0.3
 1.0
 0.4
 0.1
 -1.0
 -0.0
 0.4
 -0.1
33 LOC101244006 zinc finger family protein 101244006 2.9 3.1
 0.9
0.9
 1.4
1.3
 0.8
0.6
 1.5
0.2
 0.0
0.0
 0.4
0.4
 2.1
1.8
 1.5
1.3
 1.5
1.4
 -0.1
-0.1
34 LOC101248073 transcription factor LHW-like 101248073 2.9 3.0
 0.7
-0.9
 1.7
-0.3
 1.0
-0.7
 0.8
 0.5
-0.8
 -0.6
-1.1
 0.3
-0.1
 0.2
-0.5
 -0.0
-0.8
 0.5
0.5
35 LOC101263559 actin-related protein 2 101263559 2.9 3.1
 -0.9
 0.3
 -0.9
 1.4
 1.3
 1.1
 -0.1
 2.2
 0.8
 0.3
36 Hxk2 hexokinase 543638 2.8 2.9
 0.2
-0.1
 0.7
0.7
 -0.2
-0.4
 -0.3
-1.0
 1.0
-0.5
 1.3
-0.7
 -1.1
-1.2
 1.3
-1.7
 -0.9
-1.3
 0.9
0.6
37 PMEU1 pectin methylesterase 544016 2.8 2.4
 1.1
-0.1
 0.4
0.2
 0.7
0.2
 0.4
0.1
 1.5
1.3
 0.3
-0.3
 0.7
0.5
 1.6
1.1
 2.4
1.0
 -0.6
-1.1
38 LOC101245147 UDP-glycosyltransferase 91A1 101245147 2.8 2.9
 0.7
0.5
 1.6
1.4
 0.9
0.3
 -0.4
-1.0
 0.2
-0.5
 -0.1
-0.3
 0.5
0.1
 0.8
0.5
 1.2
1.1
 0.6
0.4
39 LOC101263304 zeatin O-glucosyltransferase 101263304 2.8 2.8
 1.5
1.0
 0.9
0.9
 1.4
1.3
-0.2
 -0.3
 -0.3
 -0.2
-1.1
 -1.2
-1.3
 0.4
0.1
40 LOC101250258 uncharacterized LOC101250258 101250258 2.8 3.0
 1.2
 1.0
 -0.1
 0.0
 0.8
 -0.6
 -0.3
 1.3
 -1.4
 0.3
41 LOC101259532 purple acid phosphatase 23 101259532 2.8 3.0
 0.5
 -0.2
 0.5
1.5
 0.6
 1.1
 0.5
 -1.1
 0.6
42 LOC101251432 serine/threonine-protein kinase SRK2I 101251432 2.8 3.0
 -0.3
-0.3
 0.4
-0.1
 1.0
-0.5
 2.6
0.8
 0.4
-0.3
 -0.7
-1.1
 0.2
-0.6
 0.3
-0.8
 0.0
-0.4
 0.5
-0.4
43 LOC101256933 uncharacterized LOC101256933 101256933 2.7 3.1
 -0.4
 1.4
 0.6
 -1.9
 0.6
 0.3
 0.6
 0.2
 -0.1
 1.4
0.4
44 LOC101258497 uncharacterized LOC101258497 101258497 2.7 2.9
 0.5
-0.0
 0.7
0.0
 -0.4
-0.5
 -1.8
 -1.3
 -0.7
 -0.3
 1.2
 0.8
 -0.0
45 ARF8a auxin response factor 8a 100736450 2.7 2.7
 0.3
0.0
 0.9
0.2
 1.6
1.2
 0.2
 -0.1
-0.1
 0.3
0.0
 0.1
-0.3
 -1.5
-1.6
 -1.7
-1.8
 -0.7
46 AP2d APETALA2-like protein AP2d 100736472 2.7 2.8
 1.0
0.3
 1.2
0.7
 1.3
0.9
 0.1
-0.2
 0.6
0.4
 0.7
0.6
 0.4
0.4
 1.5
1.3
 1.1
0.4
 0.8
0.2
47 LOC101262095 protein PHR1-LIKE 3-like 101262095 2.7 3.0
 -0.4
-0.7
 1.1
0.1
 -0.1
-0.6
 2.5
1.4
 -0.7
-1.0
 -0.1
-0.8
 0.9
0.4
 1.2
0.5
 0.8
-0.2
 0.4
-0.0
48 LOC101260206 probable L-type lectin-domain containing receptor kinase S.5 101260206 2.7 2.8
 -0.0
-0.5
 -0.2
-0.2
 -0.1
-0.3
1.5
-0.2
 0.1
-0.7
 1.3
0.3
 -1.8
 -1.1
 -0.2
-0.4
49 LOC101265242 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 101265242 2.7 2.4
 0.3
0.0
 0.6
-0.3
 0.4
0.4
 -1.7
-2.0
 -0.6
-0.8
 -0.1
-0.4
 -0.5
-0.5
 -0.9
-1.4
 -0.3
-1.1
 0.7
0.5
50 LOC101249542 alpha-galactosidase 1 101249542










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