Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.5   103839938   pentatricopeptide repeat-containing protein At3g16610 
 gma-u.4   100780518   DEAD-box ATP-dependent RNA helicase 22 
 ppo-u.4   18111160   pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.4   11406042   pentatricopeptide repeat-containing protein At3g16610 
 osa-u.4   4327814   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 103839938 (bra-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 brp3060   Protein export  1 87 -
 brp3008   Ribosome biogenesis in eukaryotes  1 144 -

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bra:LOC103839938 (pentatricopeptide repeat-containing protein At3g16610) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.5
for
103839938
gma-u.4
for
100780518
ppo-u.4
for
18111160
mtr-u.4
for
11406042
osa-u.4
for
4327814
1 LOC103831305 putative pentatricopeptide repeat-containing protein At1g68930 103831305 7.5 4.3
 4.2
 3.3
1.8
 2.9
2 LOC103852396 pentatricopeptide repeat-containing protein At4g30700 103852396 6.7 3.2
 2.5
 3.9
3 LOC103859314 pentatricopeptide repeat-containing protein At3g09040, mitochondrial 103859314 6.2 3.9

1.5
4 LOC103846285 pentatricopeptide repeat-containing protein At5g16860 103846285 6.2 2.2

0.3
-0.4
5 LOC103849612 pentatricopeptide repeat-containing protein At4g33170 103849612 6.1 3.3
2.1
2.7
6 LOC103845985 pentatricopeptide repeat-containing protein At2g17210 103845985 5.9


0.5
7 LOC103873083 pentatricopeptide repeat-containing protein At3g49170, chloroplastic 103873083 5.9 4.3
1.6
 1.8
8 LOC103862972 pentatricopeptide repeat-containing protein At3g58590 103862972 5.9 1.4
 2.5
 1.7
 1.7
9 LOC103836421 pentatricopeptide repeat-containing protein At1g07740, mitochondrial 103836421 5.9 2.2
 3.3
 -0.0
10 LOC103836612 pentatricopeptide repeat-containing protein At1g03540 103836612 5.5 4.2
2.5
 1.8
11 LOC103866760 uncharacterized LOC103866760 103866760 5.4 3.7
2.4
 3.0
 2.9
 0.7
12 LOC103839842 pentatricopeptide repeat-containing protein At4g04370 103839842 5.4 2.5
2.4
13 LOC103830579 putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 103830579 5.4 3.0
 3.5
 1.4
 0.8
14 LOC103832674 putative pentatricopeptide repeat-containing protein At1g53330 103832674 5.4 3.1
0.5
15 LOC103868345 pentatricopeptide repeat-containing protein At4g14850 103868345 5.3 3.0
3.3
1.8
 3.9
16 LOC103867741 putative pentatricopeptide repeat-containing protein At5g09950 103867741 5.3 3.6
 2.8
1.3
 2.5
 2.5
17 LOC103852474 pentatricopeptide repeat-containing protein At4g30700 103852474 5.1 3.2
 2.5
 3.9
18 LOC103854966 uncharacterized LOC103854966 103854966 5.1



19 LOC103848948 uncharacterized LOC103848948 103848948 5.0



20 LOC103834433 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 103834433 5.0 3.4
 3.1
 3.5
21 LOC103848947 uncharacterized LOC103848947 103848947 5.0



22 LOC103841556 pentatricopeptide repeat-containing protein At3g56550 103841556 5.0



23 LOC103875008 5'-nucleotidase domain-containing protein 4 103875008 5.0 1.6
1.4
 2.7
1.2
 0.8
 -0.3
24 LOC103852375 midasin 103852375 5.0 7.0
6.5
 4.0
 5.4
 1.6
25 LOC103856774 pentatricopeptide repeat-containing protein DOT4, chloroplastic 103856774 4.8 4.5
1.0
2.6
 1.6
26 LOC103843462 receptor-like protein 1 103843462 4.8 0.7
 0.4
0.1
 0.7
0.5
 1.1
27 LOC103871457 pentatricopeptide repeat-containing protein At4g02750 103871457 4.8 4.3
3.6
 2.7
 2.3
2.3
 1.7
28 LOC103859610 putative pentatricopeptide repeat-containing protein At3g15130 103859610 4.8 3.6


29 LOC103871206 pentatricopeptide repeat-containing protein At1g62670, mitochondrial 103871206 4.8 4.1
3.7
 2.8
2.5
 3.5
3.4
30 LOC103869017 pentatricopeptide repeat-containing protein At3g22690 103869017 4.7 4.5
3.0
31 LOC103858670 tRNA wybutosine-synthesizing protein 2/3/4 103858670 4.7 7.5
 2.2
 2.7
 0.0
32 LOC103858474 pentatricopeptide repeat-containing protein At4g08210 103858474 4.7 4.0
2.7
33 LOC103845866 rRNA biogenesis protein RRP5 103845866 4.7 8.5
8.5
 3.4
 3.1
 1.3
34 LOC103830702 putative pentatricopeptide repeat-containing protein At1g74400 103830702 4.7



35 LOC103855553 uncharacterized LOC103855553 103855553 4.6 5.0
 3.7
 2.8
 2.1
36 LOC103827756 pentatricopeptide repeat-containing protein At5g46100 103827756 4.6 2.7
 2.6
 2.1
 2.1
37 LOC103846423 pentatricopeptide repeat-containing protein At5g15300 103846423 4.6
2.1
 1.8
38 LOC103863731 putative pentatricopeptide repeat-containing protein At5g37570 103863731 4.6 3.9
 3.6
 3.0
1.8
 0.6
39 LOC103870345 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 103870345 4.6 3.6
2.5
 3.4
40 LOC103844533 pentatricopeptide repeat-containing protein At1g03100, mitochondrial 103844533 4.6 3.1
0.7
 2.2
 1.4
 0.7
41 LOC103855167 pentatricopeptide repeat-containing protein At3g03580 103855167 4.6



42 LOC103850148 pentatricopeptide repeat-containing protein At5g39680 103850148 4.6 3.6
1.9
 2.7
43 LOC103847148 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial 103847148 4.6 3.2
4.5
 1.0
44 LOC103835997 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 103835997 4.6 3.8

2.9
45 LOC103863834 pentatricopeptide repeat-containing protein At5g39350 103863834 4.5 2.1
 3.8
 3.5
 2.4
46 LOC103835738 protein translocase subunit SECA2, chloroplastic 103835738 4.5 1.5
 2.8
 2.8
 -0.4
47 LOC103831270 pentatricopeptide repeat-containing protein At4g35130, chloroplastic 103831270 4.4


0.4
48 LOC103870097 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 103870097 4.4 1.4
2.9
 1.7
49 LOC103841939 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 103841939 4.4 2.2
3.4
 0.7
50 LOC103860380 pentatricopeptide repeat-containing protein At2g13600 103860380



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