Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4327814   pentatricopeptide repeat-containing protein At3g16610 
 osa-r.5   4327814   pentatricopeptide repeat-containing protein At3g16610 
 osa-m.8   4327814   pentatricopeptide repeat-containing protein At3g16610 
 gma-u.4   100780518   DEAD-box ATP-dependent RNA helicase 22 
 ppo-u.4   18111160   pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.4   11406042   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 4327814 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1232   Nucleotide metabolism  3 78 3.22
 osa240   Pyrimidine metabolism  2 62 2.12
 osa400   Phenylalanine, tyrosine and tryptophan biosynthesis  1 51 -
 osa380   Tryptophan metabolism  1 60 -
 osa230   Purine metabolism  2 91 -

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osa:LOC4327814 (pentatricopeptide repeat-containing protein At3g16610) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4327814
osa-r.5
for
4327814
osa-m.8
for
4327814
gma-u.4
for
100780518
ppo-u.4
for
18111160
mtr-u.4
for
11406042
1 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 5.4 5.1
 5.7


2 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 5.2 3.7
 6.7
 2.2
 3.4
 1.7
3 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 5.1 4.7
 5.5
 1.7
 -0.4
 -0.6
4 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 4.9 4.4
 5.4

2.2
5 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 4.7 3.2
 6.3
 5.0
 3.2
 3.6
6 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 4.7 3.6
 5.7
 3.7
3.8
7 LOC4342414 non-structural maintenance of chromosomes element 3 homolog 4342414 Os07g0151300 4.5 3.4
 5.5
 -0.6
-1.7
 -0.5
 -0.1
8 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 4.4 2.1
 6.8
 1.0
1.0
 2.0
 -0.3
9 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 4.3 4.3
 4.3


10 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 4.0 3.4
 4.6
 5.1
 3.9
3.2
 3.7
11 LOC4339275 single-stranded DNA-binding protein, mitochondrial 4339275 Os05g0509700 4.0 3.0
 4.9
 1.5
0.4
 2.2
 1.9
12 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.9 3.1
 4.8
 3.0
3.3
1.8
13 LOC4333040 pentatricopeptide repeat-containing protein At4g33990 4333040 Os03g0396200 3.9 1.7
 6.0
 4.4
 1.5
 1.8
14 LOC4332866 probable diphthine methyl ester synthase 4332866 Os03g0355800 3.8 3.8
 3.9
 0.7
0.4
 -0.0
 -0.9
15 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 3.8 2.7
 4.9


16 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 3.8 4.2
 3.3

1.1
17 LOC4324326 pentatricopeptide repeat-containing protein At1g05600 4324326 Os01g0913800 3.7 2.9
 4.6
 1.3
 0.4
 1.2
-0.2
18 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 3.7 2.5
 5.0
 4.3

19 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 3.7 4.0
 3.4


20 LOC4344190 putative pentatricopeptide repeat-containing protein At5g40405 4344190 Os07g0662700 3.6 2.2
 5.0


21 LOC4348020 MEIOTIC F-BOX protein MOF-like 4348020 Os10g0126700 3.6 1.8
 5.3


22 LOC4327795 F-box only protein 7 4327795 Os01g0530500 3.5 3.0
 4.0


23 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 3.5 1.5
 5.4
 2.4
 1.8
 3.4
24 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 3.4 1.6
 5.2
 3.6
2.5
25 LOC4333679 deoxyuridine 5'-triphosphate nucleotidohydrolase-like 4333679 Os03g0669100 3.4 2.8
 4.0
 0.5
-0.5
 -1.0
 -0.8
26 LOC4348029 uncharacterized LOC4348029 4348029 Os10g0128800 3.4 2.6
 4.2


27 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 3.4 2.3
 4.5
 1.0
0.7
 1.0
0.3
 1.2
1.1
28 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 3.4 2.9
 3.9
 2.6

29 LOC4331709 probable indole-3-pyruvate monooxygenase YUCCA7 4331709 Os03g0162000 3.4 3.0
 3.7


30 LOC4325366 putative pentatricopeptide repeat-containing protein At5g52630 4325366 Os01g0651100 3.3 4.1
 2.5
 4.0
 2.1
 2.2
31 LOC4333964 COMPASS-like H3K4 histone methylase component WDR5A 4333964 Os03g0725400 3.3 1.7
 4.9
 1.0
0.6
 -0.2
-0.8
 -0.4
-0.5
32 LOC4340474 uncharacterized LOC4340474 4340474 Os06g0213900 3.3 2.6
 4.0
 0.1
-1.3
 -0.2
 -1.9
33 LOC9272023 pentatricopeptide repeat-containing protein At4g02820, mitochondrial 9272023 Os12g0527900 3.3 2.7
 3.9
 1.1
 0.9
 2.0
34 LOC4344519 exosome complex component RRP41-like 4344519 Os08g0116800 3.3 2.1
 4.5
 1.1
-0.6
 0.9
-0.8
 0.3
35 LOC4348590 uncharacterized LOC4348590 4348590 Os10g0407100 3.2 2.4
 4.0
 1.1
0.6
 -0.1
-0.3
 -0.7
-1.2
36 LOC4342470 pentatricopeptide repeat-containing protein At3g62890 4342470 Os07g0163900 3.2 4.7


2.1
37 LOC4345655 pentatricopeptide repeat-containing protein At3g47530 4345655 Os08g0434000 3.2 3.4
 3.1
 3.3
2.6
38 LOC9269859 uncharacterized LOC9269859 9269859 3.2 4.6



39 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.2 1.7
 4.7
 3.8
3.3

40 LOC4326607 protein ROOT PRIMORDIUM DEFECTIVE 1 4326607 Os01g0617600 3.2 2.8
 3.5
 1.2
 1.6
41 LOC4343831 glycine-rich RNA-binding protein 2, mitochondrial 4343831 Os07g0602600 3.2 4.0
 2.4
 3.6
3.4
 1.3
1.3
 0.9
0.8
42 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 3.2 2.7
 3.6


43 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.1 3.0
 3.2
 3.6

44 LOC4350046 F-box protein At4g22280 4350046 Os11g0209200 3.1 3.0
 3.2


45 LOC4325578 putative pentatricopeptide repeat-containing protein At5g40405 4325578 Os01g0715700 3.1 4.4
3.7

46 LOC4349873 uncharacterized LOC4349873 4349873 Os11g0167300 3.1 4.2
 2.0
 5.0
3.9
 3.3
1.7
 3.1
47 LOC4350065 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4350065 Os11g0213500 3.1 4.5
3.3
2.8
48 LOC4334640 anthranilate synthase alpha subunit 1, chloroplastic-like 4334640 OSNPB_030826500 3.1 2.8
 3.4
 0.4
-0.2
 0.3
-0.7
 0.2
-0.3
49 LOC4345281 GMP synthase [glutamine-hydrolyzing] 4345281 Os08g0326600 3.1 2.5
 3.7
 4.3
4.0
 2.2
 1.5
50 LOC4339741 zinc finger BED domain-containing protein RICESLEEPER 3-like 4339741 OSNPB_050583200




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