Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4334582   AP2-like ethylene-responsive transcription factor TOE3 
 osa-r.5   4334582   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.4   9271266   ethylene-responsive transcription factor RAP2-7 
 osa-u.4   4342787   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.4   4337654   AP2-like ethylene-responsive transcription factor TOE3 
 ath-u.4   AP2   Integrase-type DNA-binding superfamily protein 
 ath-u.4   TOE3   target of early activation tagged (EAT) 3 
 ath-u.4   RAP2.7   uncharacterized protein 
 gma-u.4   100792442   floral homeotic protein APETALA 2 
 gma-u.4   100786333   floral homeotic protein APETALA 2 
 gma-u.4   100794096   floral homeotic protein APETALA 2 
 sly-u.4   AP2c   APETALA2-like protein AP2c 
 sly-u.4   AP2d   APETALA2-like protein AP2d 
 sly-u.4   AP2a   APETALA2a 
 ppo-u.4   7462600   floral homeotic protein APETALA 2 
 ppo-u.4   18100239   ethylene-responsive transcription factor RAP2-7 
 ppo-u.4   7489744   AP2-like ethylene-responsive transcription factor TOE3 
 mtr-u.4   25493474   floral homeotic protein APETALA 2 
 mtr-u.4   11425769   APETALA2-like protein 2 
 mtr-u.4   11417561   AP2-like ethylene-responsive transcription factor TOE3 

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Top 50 coexpressed genes to 4334582 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa130   Ubiquinone and other terpenoid-quinone biosynthesis  1 46 -
 osa53   Ascorbate and aldarate metabolism  1 64 -
 osa520   Amino sugar and nucleotide sugar metabolism  1 162 -
 osa940   Phenylpropanoid biosynthesis  1 196 -
 osa1240   Biosynthesis of cofactors  1 248 -

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osa:LOC4334582 (AP2-like ethylene-responsive transcription factor TOE3) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4334582
osa-r.5
for
4334582
osa-u.4
for
9271266
osa-u.4
for
4342787
osa-u.4
for
4337654
ath-u.4
for
AP2
ath-u.4
for
TOE3
ath-u.4
for
RAP2.7
gma-u.4
for
100792442
gma-u.4
for
100786333
gma-u.4
for
100794096
sly-u.4
for
AP2c
sly-u.4
for
AP2d
sly-u.4
for
AP2a
ppo-u.4
for
7462600
ppo-u.4
for
18100239
ppo-u.4
for
7489744
mtr-u.4
for
25493474
mtr-u.4
for
11425769
mtr-u.4
for
11417561
1 LOC4347499 UDP-glucuronate 4-epimerase 6 4347499 Os09g0504000 3.0 3.8
 1.5
-0.1
 0.9
-0.5
 0.7
-1.3














2 LOC4338977 BEL1-like homeodomain protein 9 4338977 Os05g0455200 3.0 4.1
 0.3
-0.4
 2.3
1.4
 1.2
1.0
 0.7
0.3
 1.9
1.0
 0.2
-1.0
 0.5
0.3
 0.7
0.2
 0.6
0.3
 2.2
-0.0
 0.9
-0.9
 -0.1
-0.3
 1.3
-0.2
 0.4
-0.5
 0.2
-0.6
 2.0
 -0.6
 -0.2
3 LOC4346973 probable transcription factor RL9 4346973 OSNPB_090395300 2.7 4.0
 0.8
-0.5
 1.1
0.3
 1.1
0.4
 3.9
 0.7
 0.1
 3.1
2.8
 1.4
1.3
 2.8
2.6
 1.7
0.8
 0.8
-0.5
 0.2
-0.9


0.1
 -0.3
 -0.9
4 LOC4324956 integrin-linked protein kinase 1 4324956 Os01g0892800 2.6 3.9
 -0.1
-0.5
 2.9
-0.3
 3.3
0.6
 1.7
-0.5
 0.3
-0.3
 1.6
0.1
 2.8
1.4
 0.8
-0.3
 1.4
1.2
 0.0
-0.9
 1.5
-1.3
 0.4
0.1
 0.9
0.1
 1.4
-0.2
 0.9
-0.4
 0.7
 0.1
 2.9
5 PIN1A auxin efflux carrier component 1a-like 4330700 OSNPB_020743400 2.6 3.6
 0.3
-0.6
 1.4
0.9
 2.0
0.5
 0.1
 0.8
 0.9
 0.3
0.2
 -0.1
-0.4
 1.0
0.7
 0.3
 0.3
 -1.3
 0.4
-0.1
 -0.9
-1.4
 1.8
0.6
 2.0
 1.1
 -1.0
6 LOC4349613 uncharacterized LOC4349613 4349613 Os11g0117700 2.6 3.8
 -0.1
-0.2
 1.0
1.0
 1.6
0.8














7 LOC4328406 auxin response factor 6-like 4328406 OSNPB_020164900 2.5 3.4
 0.6
0.2
 1.1
0.7
 0.8
0.2
 3.1
 0.4
 1.9
 2.8
2.6
 1.3
0.0
 2.7
1.7
 -0.3
 0.2
 0.9
 3.6
3.1
 2.7
1.4
 0.8
0.8
 1.2
0.2
 0.8
-0.3
 2.1
1.9
8 LOC4332743 receptor-like protein kinase FERONIA 4332743 Os03g0333200 2.5 3.2
 0.9
-0.2
 0.7
-0.2
 -0.2
-0.8
 1.4
 -0.6
 -0.3
 1.7
1.2
 0.9
0.3
 1.7
1.4
 0.6
-1.7
 0.9
-1.9
 0.3
0.1
 -0.2
-0.4
 -0.1
-0.3
 0.2
0.2
 -0.0
-0.2
 -0.1
-0.9
 0.1
-0.5
9 LOC4336419 auxin response factor 10 4336419 OSNPB_040519700 2.4 3.4
 0.1
 1.0
 1.2














10 LOC4324662 probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial 4324662 Os01g0722100 2.4 3.8
 -0.9
 1.0
 -0.3
 0.9
 1.7
 1.2
 0.0
 0.2
 0.2
 1.4
 0.1
 -0.5
 1.4
 1.8
 -0.6
 -0.0
 -0.2
 0.1
11 LOC4338163 probable aquaporin TIP4-1 4338163 OSNPB_050231700 2.4 3.6
 -0.2
-0.3
 1.2
-0.4
 2.2
-0.6














12 LOC4329978 filament-like plant protein 7 4329978 Os02g0614600 2.4 3.3
 0.9
 0.5
 0.9














13 LOC4351589 protein FAM135B 4351589 Os12g0164800 2.3 2.9
 0.3
0.2
 1.6
-0.6
 2.1
1.1
 1.3
0.7
 0.3
-0.3
 1.4
0.1
 1.4
1.3
 1.6
1.4
 0.5
0.5
 -1.4
 1.4
 -0.1
 2.3
1.8
 1.9
1.2
 0.3
-0.2
 1.0
0.3
 0.3
0.1
 0.4
0.4
14 LOC4339308 uncharacterized LOC4339308 4339308 Os05g0514400 2.3 3.2
 0.7
 0.3
 0.9














15 LOC4324736 glucan endo-1,3-beta-glucosidase 14 4324736 Os01g0860800 2.3 3.5
 0.1
0.1
 0.8
-0.8
 1.0
0.6
 0.3
 -0.5
 -0.2
 0.2
-0.5
 1.1
0.4
 0.3
-0.7
 0.1
 0.4
 -0.1
 0.5
0.1
 1.3
-1.1
 0.2
-1.0
 1.5
-0.3
 -0.0
-0.3
 0.4
-1.6
16 LOC4343624 protein STRUBBELIG-RECEPTOR FAMILY 3 4343624 Os07g0565400 2.3 3.2
 0.1
-0.8
 0.7
-0.4
 0.2
-0.4
 1.9
-0.3
 0.6
-0.2
 0.2
-0.2
 0.4
0.3
 -0.1
-0.2
 2.4
0.8
 0.9
-0.4
 1.5
0.5
 0.6
-0.1
 1.5
0.9
 1.4
0.9
 0.3
0.1
 0.8
-0.3
 1.7
-0.5
 0.4
0.1
17 LOC4349894 CBS domain-containing protein CBSCBSPB3 4349894 Os11g0170300 2.3 3.3
 0.6
-0.1
 0.4
-0.2
 1.0
0.8
 0.4
-0.9
 -0.1
-0.8
 0.3
-0.4
 1.4
-0.2
 0.0
-0.4
 1.0
0.6
 0.0
 -0.6
 -0.6
 1.4
0.1
 -0.2
-0.6
 -0.2
-1.2
 0.7
-0.4
 0.5
0.2
 0.6
-0.2
18 LOC4341718 probable 4-coumarate--CoA ligase 4 4341718 OSNPB_060656500 2.3 3.1
 0.8
0.3
 0.2
-0.3
 2.1
1.9
 0.8
0.6
 0.5
-0.3
 1.5
0.7
 2.0
1.4
 1.9
1.3
 2.4
1.8
 2.0
1.6
 1.4
0.6
 0.7
0.2
 1.4
-0.4
 0.4
0.1
 1.0
0.5
 0.5
0.4
 0.3
-0.0
 1.9
1.1
19 LOC4331563 uncharacterized LOC4331563 4331563 Os03g0139200 2.2 3.2
 -0.5
 1.0
 0.4
 1.9
-0.3
 -0.1
-0.7
 2.1
-0.5
 0.6
-0.4
 1.4
0.5
 -1.4
-1.7
 -1.2
 -1.1
 0.1
 1.6
0.3
 -0.1
-0.5
 0.3
-0.2
 -0.3
 1.2
 0.8
20 LOC4350238 protein NLP2-like 4350238 Os11g0264300 2.2 3.3
 -1.3
 1.5
 1.2














21 LOC4350215 ankyrin repeat-containing protein NPR4-like 4350215 Os11g0252400 2.2 3.1
 0.4
-0.2
 0.3
0.1
 0.3
0.3





0.5
0.4
 1.1
0.7
 0.9
0.3
 0.4
0.3
 0.5
0.3
 0.6
-0.1


22 LOC4337363 auxin response factor 12-like 4337363 OSNPB_040671900 2.2 3.0
 0.2
 -0.1
 0.6
 0.9
 0.2
 2.1
 1.4
1.3
 0.7
0.1
 2.0
1.3
 1.4
1.0
 1.9
-0.1
 -0.6
-0.9
 1.4
1.2
 1.8
1.1
 1.7
1.2
 1.4
1.4
 1.0
-0.0
 0.3
0.0
23 LOC4328953 probable WRKY transcription factor 27 4328953 Os02g0265200 2.2 3.4
 1.2
0.2
 0.6
0.6
 0.4
-0.0
 1.3
1.1
 -0.1
-0.2
 1.2
0.5
 1.7
1.2
 1.2
1.1
 1.0
0.7
 0.9
0.3
 0.9
0.1
 0.8
-0.1
 2.3
0.4
 1.0
0.5
 1.6
1.4
 2.1
0.5
 0.4
-0.4
 0.8
0.3
24 LOC4351908 serine carboxypeptidase 1-like 4351908 OSNPB_120257000 2.2 3.2
 0.4
-0.3
 1.1
-0.9
 1.4
0.1
 0.6
 0.8
 1.4
 1.3
-0.0
 0.4
-0.0
 0.1
-0.2
 -0.6
-0.8
 -0.0
-0.3
 -0.5
-0.6
 -0.5
 -1.5
 -1.6
 0.9
-1.0
 1.2
0.5
 0.7
-1.0
25 LOC4346235 kinesin-like protein KIN-7H 4346235 2.2 2.9
 0.8
-0.1
 0.6
0.4
 0.9
-0.3














26 LOC4332365 uncharacterized LOC4332365 4332365 Os03g0267500 2.2 2.7
 0.1
 0.6
 -0.3
 -0.2
 1.6
 1.5
 2.6
1.8
 1.5
0.4
 2.9
2.6
 1.0
-0.3
 0.1
-0.2
 1.7
0.5
 1.0
0.6
 1.0
-0.1
 -0.7
-0.7
 2.3
0.3
 0.7
-0.9
 0.9
-1.2
27 LOC4342417 leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 4342417 Os07g0152200 2.2 3.3
 1.2
 -1.0
 -0.1


2.2
 0.2
 1.1
 -0.7
 -1.2
 0.2
 0.2
 -1.4
 2.9
 1.0
 -0.8
 0.5
28 LOC4330760 uncharacterized LOC4330760 4330760 Os02g0753900 2.2 3.1
 -0.7
 0.5
 1.4














29 LOC4351587 putative F-box protein At3g52320 4351587 Os12g0164300 2.2 3.2
 0.5
0.1
 0.9
0.8
 1.5
0.9











-1.1
 -0.3
 -0.5
30 LOC4330614 potassium transporter 25-like 4330614 OSNPB_020730300 2.2 3.2
 -0.3
-0.7
 0.6
0.6
 0.7
0.3
 0.4
-0.5
 1.4
-0.2
 1.6
0.2
 2.1
1.5
 1.4
1.2
 0.3
0.2
 2.0
0.7
 2.1
-0.2
 0.4
0.3
 0.5
-0.3
 2.0
1.4
 0.2
-0.4
 0.8
0.0
 -0.9
-1.0
 1.9
0.3
31 LOC4331448 protein FIZZY-RELATED 2 4331448 Os03g0123300 2.1 2.7
 -0.9
 0.1
 -0.2
 1.9
1.4
 1.4
-0.9
 0.8
0.0
 1.5
1.1
 1.5
0.8
 1.2
0.3
 -0.2
-0.6
 -0.1
-0.2
 1.5
-0.7
 0.3
-0.7
 -0.3
-0.9
 -0.8
-1.0
 -2.5
 0.9
 0.3
32 LOC4331613 protein SHOOT GRAVITROPISM 6 4331613 Os03g0146600 2.1 3.0
 -0.7
 0.7
 -0.8
 -1.3
 -1.6
 0.3
 -0.3
 0.7
 0.0
 1.2
 0.9
 0.4
 1.8
 2.2
 -0.0
 0.1
 0.3
 0.9
33 LOC4338068 uncharacterized LOC4338068 4338068 Os05g0203900 2.1 3.2
 -0.3
-0.8
 2.2
0.8
 1.1
-0.5














34 LOC4330554 aspartyl protease family protein At5g10770 4330554 Os02g0720900 2.1 2.8
 0.2
-0.0
 -0.6
-0.8
 1.9
-0.2


-0.1
-0.3
 0.7
0.2
 0.6
-0.1


-0.4
 1.9
 0.6
 -0.4
 -0.1
 -1.4
35 LOC4341659 uncharacterized LOC4341659 4341659 Os06g0646400 2.1 3.0
 -0.4
-0.8
 1.7
-0.0
 0.4
0.0
 -0.4
 -0.2
 -1.3
 1.2
-0.4
 1.5
0.6
 1.2
-0.0
 -0.1
 -1.3
 1.9
 1.2
-0.6
 0.4
-0.2
 0.4
-0.6
 -0.5
-1.3
 -0.6
-1.5
 0.5
-0.2
36 LOC4347110 protein YABBY 3-like 4347110 2.1 3.0

















37 LOC4328265 auxin response factor 5 4328265 OSNPB_020141100 2.1 2.9
 0.0
-0.1
 1.8
1.4
 3.0
1.1


2.6
1.2
 0.4
0.3
 2.7
1.6
 0.6
0.3
 1.9
0.3
 -0.2
-1.6
 1.4
1.1
 -0.0
-1.0
 0.3
-0.3
 0.6
 -1.4
 1.6
38 LOC107277958 uncharacterized LOC107277958 107277958 2.1 3.0

















39 LOC4334614 L-type lectin-domain containing receptor kinase IV.1 4334614 Os03g0823000 2.1 2.8
 0.5
 0.0
 1.7














40 LOC9266405 long-chain-alcohol oxidase FAO1 9266405 Os10g0474800 2.1 3.1
 0.3
0.1
 0.8
-0.3
 0.5
-0.0
 1.2
0.6
 1.3
0.8
 1.8
0.6
 1.4
0.8
 1.3
1.0
 1.9
1.0
 0.7
-0.1
 1.1
-0.5
 -0.2
-0.6
 1.7
-0.1
 -0.0
-0.3
 0.1
-0.2
 0.8
-1.1
 1.4
-0.1
 -0.4
-1.1
41 LOC4342440 nuclear transcription factor Y subunit A-2 4342440 Os07g0158500 2.1 3.3
 0.4
-0.3
 1.5
1.4
 2.0
0.5
 2.9
0.9
 2.5
1.4
 3.7
2.1
 0.2
0.1
 0.7
-0.2
 -0.1
-0.3
 1.5
0.2
 0.3
-0.2
 1.0
-0.3
 1.2
0.9
 0.6
0.1
 0.6
-1.1
 0.3
-1.0
 0.1
-1.0
 0.3
-0.7
42 LOC4334296 uncharacterized LOC4334296 4334296 Os03g0777500 2.1 2.9
 -0.4
-0.7
 1.7
0.8
 0.8
-0.6
 1.9
0.5
 1.3
1.1
 0.8
0.0
 0.9
0.6
 0.0
-0.2
 0.8
0.1
 0.5
-0.6
 3.2
1.4
 0.5
0.1
 -0.3
-0.8
 0.4
0.4
 -0.4
-0.6
 -0.2
-0.7
 0.4
0.3
 0.5
-0.9
43 LOC4331740 carbon catabolite repressor protein 4 homolog 1 4331740 Os03g0166800 2.1 3.1
 -0.1
-0.3
 2.1
0.0
 0.7
0.5
 1.6
1.0
 0.0
-0.0
 1.2
0.5
 0.7
0.5
 1.2
-0.6
 1.2
0.3
 0.6
0.5
 -0.7
-1.5
 1.5
0.2
 0.8
-0.7
 1.5
0.6
 0.7
-0.3
 -0.0
-0.3
 -0.1
-0.6
 1.4
-0.0
44 LOC4344687 oxysterol-binding protein-related protein 2A 4344687 Os08g0154900 2.1 3.1
 0.0
-0.2
 0.3
-0.3
 1.2
0.0
 -0.1
-0.4
 0.7
-0.4
 0.5
0.2
 1.4
0.3
 0.6
0.6
 0.9
-0.0
 3.0
 0.8
 1.2
 1.0
0.7
 0.8
-0.6
 0.7
0.5
 0.9
 -0.3
 0.5
45 LOC4346162 zinc finger protein CONSTANS-LIKE 14 4346162 Os08g0536300 2.1 2.3
 -0.5
-0.6
 1.7
1.5
 1.1
0.7
 1.9
1.6
 2.0
0.4
 1.6
1.5
 0.4
-0.7
 -0.5
-1.3
 0.3
-0.1
 0.3
 1.5
 0.8
 0.5
-0.3
 1.0
-0.5
 0.6
-1.4
 2.4
 -0.5
 -0.7
46 LOC4342694 leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 4342694 Os07g0207100 2.1 2.9
 -0.4
 2.1
 0.9
 -0.8
 -1.0
 0.6
 0.2
-0.8
 -1.3
-1.6
 -1.0
-1.4
 0.7
0.2
 0.4
-1.7
 -0.3
-1.5
 -0.1
-0.1
 -0.1
-0.6
 -0.4
-0.4
 1.2
 0.0
 -0.8
47 LOC4340939 auxin-responsive protein IAA21-like 4340939 OSNPB_060335500 2.0 3.0
 0.3
0.3
 0.6
-0.5
 0.4
-0.1
 1.4
 0.4
 0.1
 1.1
0.9
 -0.0
-0.3
 0.4
0.3
 1.7
0.6
 1.8
0.2
 -0.5
-0.6
 1.3
0.2
 0.4
-1.0
 1.3
-0.2
 2.0
0.9
 1.4
0.7
 1.5
-0.4
48 LOC4340749 transcription factor bHLH49 4340749 Os06g0275600 2.0 3.1
 -0.7
 1.6
 0.4














49 LOC107276380 probable WRKY transcription factor 72 107276380 Os06g0146250 2.0 3.0
 0.1
-1.1
 1.2
-0.1
 1.7
0.5
 0.7
0.2
 0.3
-0.2
 1.4
0.2
 0.6
0.1
 0.4
0.4
 0.5
0.4
 0.8
0.4
 1.2
0.7
 0.5
0.5
 0.5
-1.8
 -0.1
-1.1
 -0.4
-1.2
 1.8
-1.7
 -0.4
-0.8
 -0.0
-0.2
50 LOC4343793 formin-like protein 5 4343793 OSNPB_070596300 2.0 2.6
 -0.3
 -0.3
 -0.1














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