Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.notissue   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.tis   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.str   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.hor   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.bio   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.lig   AT3G16610   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.4   100780518   DEAD-box ATP-dependent RNA helicase 22 
 ppo-u.4   18111160   pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.4   11406042   pentatricopeptide repeat-containing protein At3g16610 
 osa-u.4   4327814   pentatricopeptide repeat-containing protein At3g16610 

close


Top 50 coexpressed genes to AT3G16610 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath960   Tropane, piperidine and pyridine alkaloid biosynthesis  1 36 -

close


ath:AT3G16610 (pentatricopeptide (PPR) repeat-containing protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.9
for
AT3G16610
ath-m.4.notissue
for
AT3G16610
ath-m.4.tis
for
AT3G16610
ath-m.4.str
for
AT3G16610
ath-m.4.hor
for
AT3G16610
ath-m.4.bio
for
AT3G16610
ath-m.4.lig
for
AT3G16610
gma-u.4
for
100780518
ppo-u.4
for
18111160
mtr-u.4
for
11406042
osa-u.4
for
4327814
1 AT3G13880 Tetratricopeptide repeat (TPR)-like superfamily protein 820601 At3g13880 8.5 98.3
 2.7
 2.1
 2.4
 0.3
 1.0

1.3
2 AT3G20730 PPR superfamily protein 821621 At3g20730 8.2 158.4
 2.2
 3.6
 1.4
 1.1
 -0.2
4.5

3 AT3G02330 Pentatricopeptide repeat (PPR) superfamily protein 821115 At3g02330 7.5 61.5
 3.3
 4.6
 1.8
 -0.9
 -0.1
3.3
2.4
4 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein 821701 At3g21470 7.5 477.8
 2.0
 2.1
 1.2
 -0.1
 3.3
 2.3
 2.6
 3.1
1.4
5 AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein 840997 At1g43980 7.5 151.0
 3.6
 3.0
 1.1
 -0.1
 0.6
 3.8
2.7
1.1
 1.1
0.3
6 AT1G74400 Tetratricopeptide repeat (TPR)-like superfamily protein 843781 At1g74400 7.5 182.7
 2.0
 4.2
 2.4
 0.3
 -1.3



7 AT5G06400 Pentatricopeptide repeat (PPR) superfamily protein 830528 At5g06400 7.3 1805.3
 3.1
 0.4
 0.8
 -0.9
 -0.6
 4.1
 3.6
 1.7
 1.5
8 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein 822194 At3g25970 7.3 61.1
 2.7
 2.4
 0.8
 0.4
 0.7
 5.0

2.3
9 AT4G19191 Tetratricopeptide repeat (TPR)-like superfamily protein 6240220 At4g19191 7.2
1.7
 4.8
 1.5
 1.1
 0.2
 1.6


10 AT3G13770 Pentatricopeptide repeat (PPR) superfamily protein 820586 At3g13770 7.2 405.3
 1.3
 2.7
 1.4
 0.8
 1.3
 1.4
2.9
 1.7
11 AT2G22070 pentatricopeptide (PPR) repeat-containing protein 816742 At2g22070 7.1 120.8
 2.6
 2.2
 0.4
 2.2
 -0.2
 4.3

3.7
12 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein 827041 At4g14050 7.0 239.3
 1.4
 2.9
 1.9
 0.4
 0.1
 3.4
2.7
 0.4
13 AT3G47840 Tetratricopeptide repeat (TPR)-like superfamily protein 823940 At3g47840 7.0 147.8
 4.3
 2.6
 0.9
 0.1
 0.1
 1.7
3.7
 2.4
14 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 838612 At1g20230 6.9 296.2
 2.2
 2.4
 0.7
 0.6
 1.1
2.9
 1.4
 2.5
15 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein 824136 At3g49740 6.9 350.2
 2.3
 2.2
 0.4
 -0.0
 -1.0
 3.0


16 AT3G58590 Pentatricopeptide repeat (PPR) superfamily protein 825028 At3g58590 6.7 269.4
 2.4
 2.3
 2.0
 0.1
 -0.8
 1.4
 2.5
 1.7
 1.7
17 OTP87 pentatricopeptide (PPR) repeat-containing protein 843800 At1g74600 6.6 1894.8
 1.8
 1.6
 1.9
 0.5
 0.3

3.1
 0.7
18 AT3G58520 Ubiquitin carboxyl-terminal hydrolase family protein 825021 At3g58520 6.5 94.9
 3.0
 2.9
 0.8
 1.1
 1.3
 1.5
-0.5
 0.8
 1.2
 1.5
19 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 835362 At5g52850 6.3 1458.7
 2.1
 1.9
 -0.9
 0.5
 1.8
 2.5
4.2
 0.9
20 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 818667 At2g40720 6.3 147.7
 1.6
 2.1
 0.3
 0.6
 1.3



21 AT1G70650 Ran BP2/NZF zinc finger-like superfamily protein 843402 At1g70650 6.2 1146.6
 1.5
 1.4
 1.5
 0.4
 3.4
 -1.1
-1.4
 -1.8
-1.8
 -1.2
 -0.9
22 AT5G47460 Pentatricopeptide repeat (PPR) superfamily protein 834796 At5g47460 6.2 326.2
 3.5
 2.7
 1.9
 -0.9
 -0.4



23 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 843226 At1g68930 6.2 247.8
 2.8
 0.4
 2.8
 1.2
 0.1
 4.3
 4.2
 3.3
1.8
 2.9
24 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein 826774 At4g11690 6.2 294.6
 2.2
 2.1
 2.4
 1.0
 0.4
 3.9
2.8
 2.9
 2.7
25 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein 838340 At1g17630 6.1 52.2
 1.7
 3.1
 2.0
 0.7
 0.0
 3.7


26 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 818272 At2g36980 6.1 243.2
 1.9
 1.4
 1.1
 0.6
 -0.1



27 SLO2 Pentatricopeptide repeat (PPR) superfamily protein 815845 At2g13600 6.1 115.5
 2.1
 1.5
 1.5
 0.1
 -0.1
 2.7
 2.9
 2.0
 -0.7
28 RARE1 Pentatricopeptide repeat (PPR) superfamily protein 831168 At5g13270 6.1 747.0
 1.1
 1.4
 0.3
 0.1
 1.6
 0.5
-0.4
 2.6

29 AT1G33350 Pentatricopeptide repeat (PPR) superfamily protein 840229 At1g33350 6.0 293.2
 2.7
 1.3
 1.8
 -0.1
 0.4
 3.2
2.2
 1.3
30 MEF20 mitochondrial editing factor 20 821430 At3g18970 6.0 1130.4
 3.3
 2.5
 -0.1
 0.6
 0.4
 0.9
0.8
1.9
31 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein 826371 At4g08210 6.0 71.2
 2.1
 3.7
 0.7
 0.9
 -0.4
 4.0
2.7
32 MEF18 mitochondrial editing factor 18 832021 At5g19020 6.0 363.2
 1.9
 1.9
 -0.4
 0.6
 1.8
 3.8
2.7
33 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein 837156 At1g06440 5.9 913.6
 1.4
 2.1
 0.5
 0.7
 -1.1
 2.2

-0.6
34 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 826999 At4g13650 5.9 1414.1
 1.5
 1.5
 0.2
 0.6
 1.5
 5.0
5.0
 2.4
 1.8
 3.0
35 AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein 843267 At1g69350 5.8 331.7
 2.3
 2.2
 0.3
 0.0
 -0.3
 4.0
2.1
36 AT5G42450 Pentatricopeptide repeat (PPR) superfamily protein 834252 At5g42450 5.7 399.0
 3.9
 2.9
 0.4
 0.9
 -0.6

1.2
37 LpxA bacterial transferase hexapeptide repeat-containing protein 829075 At4g29540 5.7 23.4
 1.6
 2.1
 2.1
 0.6
 1.4
 0.3
 1.7
 -0.6
 0.3
38 AT5G44230 Pentatricopeptide repeat (PPR) superfamily protein 834446 At5g44230 5.7 380.3
 2.6
 1.2
 0.8
 2.0
 0.8
 3.5
 2.2
 2.4
 1.0
39 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein 817475 At2g29260 5.7 896.0
 1.8
 3.9
 0.6
 0.0
 -0.5
 0.5
0.5
 1.3
0.6
 0.4
-0.2
 1.3
1.0
40 AT1G06710 Tetratricopeptide repeat (TPR)-like superfamily protein 837181 At1g06710 5.7 37.5
 2.3
 2.2
 2.8
 1.5
 0.6
 5.3
1.7
 2.6
 3.0
 0.5
41 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 833964 At5g39680 5.7 28.2
 2.1
 2.9
 2.4
 -0.3
 2.7
 3.6
1.9
 2.7
42 AT3G53550 FBD-like domain family protein 824523 At3g53550 5.6 667.0
 0.7
 1.2
 2.2
 2.6
 1.2



43 MEF3 Pentatricopeptide repeat (PPR) superfamily protein 837123 At1g06140 5.6 24.0
 1.2
 3.1
 1.7
 1.1
 0.3



44 MEF22 mitochondrial editing factor 22 820459 At3g12770 5.6 505.2
 2.0
 1.8
 -1.1
 0.6
 0.3
 2.8
 3.8

45 AT5G65570 Tetratricopeptide repeat (TPR)-like superfamily protein 836683 At5g65570 5.6 942.6
 1.9
 1.3
 1.4
 1.3
 -0.8
 2.9


46 AT5G56310 Pentatricopeptide repeat (PPR) superfamily protein 835730 At5g56310 5.5 1572.4
 1.0
 2.5
 0.6
 -0.6
 0.6
 2.0
 2.8
 0.2
 0.0
47 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 830107 At4g39530 5.5 913.9
 1.3
 2.4
 0.2
 -0.2
 0.5
 2.7

2.7
48 MEF29 Pentatricopeptide repeat (PPR) superfamily protein 829193 At4g30700 5.5 12.7
 2.9
 2.5
 0.5
 1.8
 2.0
 3.2
 2.5
 3.9
49 AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein 829665 At4g35130 5.5 349.1
 3.5
 1.9
 -0.1
 0.4
 -0.3


0.4
50 AT5G57230 Thioredoxin superfamily protein 835829 At5g57230 5.5 1557.0
 1.5
 1.5
 0.7
 0.0
 3.1
 2.3
-0.6
 0.9
-0.2
The preparation time of this page was 1.1 [sec].