Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-r.6   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.9   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.notissue   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.tis   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.str   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.hor   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.bio   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-m.4.lig   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-e.1   AT3G21140   Pyridoxamine 5'-phosphate oxidase family protein 
 ath-u.4   AT1G51560   Pyridoxamine 5'-phosphate oxidase family protein 
 gma-u.4   100785526   uncharacterized LOC100785526 
 ppo-u.4   7490851   uncharacterized LOC7490851 
 ppo-u.4   7469469   uncharacterized LOC7469469 
 mtr-u.4   25491230   uncharacterized LOC25491230 
 sly-u.4   101268193   uncharacterized LOC101268193 
 osa-u.4   4328299   uncharacterized LOC4328299 
 osa-u.4   4346040   uncharacterized LOC4346040 

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Top 50 coexpressed genes to AT3G21140 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3020   RNA polymerase  2 46 2.22
 ath250   Alanine, aspartate and glutamate metabolism  1 51 -
 ath230   Purine metabolism  2 87 -
 ath3008   Ribosome biogenesis in eukaryotes  2 96 -
 ath1240   Biosynthesis of cofactors  2 236 -

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ath:AT3G21140 (Pyridoxamine 5'-phosphate oxidase family protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G21140
ath-r.6
for
AT3G21140
ath-m.9
for
AT3G21140
ath-m.4.notissue
for
AT3G21140
ath-m.4.tis
for
AT3G21140
ath-m.4.str
for
AT3G21140
ath-m.4.hor
for
AT3G21140
ath-m.4.bio
for
AT3G21140
ath-m.4.lig
for
AT3G21140
ath-e.1
for
AT3G21140
ath-u.4
for
AT1G51560
gma-u.4
for
100785526
ppo-u.4
for
7490851
ppo-u.4
for
7469469
mtr-u.4
for
25491230
sly-u.4
for
101268193
osa-u.4
for
4328299
osa-u.4
for
4346040
1 ELO1 Paxneb protein-like protein 820292 At3g11220 5.6 5.8
 3.9
2.9
 2.2
 2.2
 2.0
 1.6
 2.0
 1.0
 0.2
 -0.5
 -0.6
 1.1
 2.4
 0.4
 1.9
2 COP13 Proteasome component (PCI) domain protein 831275 At5g14250 5.0 4.4
 4.3
 177.8
 2.5
 2.1
 2.4
 2.2
 1.2
 3.4
 2.7
 2.2
1.1
 1.0
0.7
 2.2
1.4
 0.4
 2.8
 0.9
 0.8
3 MEE49 Ribosomal RNA processing Brix domain protein 828136 At4g01560 4.9 4.3
 4.2
 112.8
 2.7
 3.7
 2.4
 1.8
 1.2
 2.7
 -0.6
 -0.1
-0.4
 1.3
-0.1
 1.0
0.8
 1.4
 0.4
 -0.3
 0.9
4 eIF6A Translation initiation factor IF6 824728 At3g55620 4.8 4.3
 4.0
 25.8
 1.1
 2.9
 4.3
 4.3
 2.2
 2.7
 0.6
 0.9
0.2
 0.3
0.0
 0.5
0.1
 1.4
 0.7
 0.7
-0.8
 0.3
-0.7
5 CRF11 Integrase-type DNA-binding superfamily protein 822185 At3g25890 4.8 4.5
 3.8
 139.1
 2.4
 3.3
 1.8
 2.0
 0.5
 3.2
 1.0
0.3
 -0.2
-0.6
 0.9
0.2
 2.5
1.2
 0.9
0.8
 1.8
0.3

6 AT1G61640 Protein kinase superfamily protein 842460 At1g61640 4.8 4.3
 3.9
 241.2
 0.9
 3.6
 4.3
 1.3
 1.7
 3.0
 0.1
-0.5
 -0.1
-1.1
 0.6
0.3
 1.5
0.5
 1.0
0.4
 2.4
1.6
 -1.3
 0.1
7 AT1G34200 Glyceraldehyde-3-phosphate dehydrogenase-like family protein 840319 At1g34200 4.6 4.1
 3.9
 235.5
 1.5
 0.9
 2.5
 1.9
 0.9
 0.6
 1.9
1.0
 2.1
0.4
 3.0
-0.2
 1.9
-1.2
 1.7
0.3
 1.1
0.5
 0.3
 -0.0
8 AT1G07840 Sas10/Utp3/C1D family 837299 At1g07840 4.5 4.2
 3.6
 271.4
 2.5
 2.1
 2.3
 1.5
 0.4
 2.5
 1.1
 0.7
-1.4
 -0.1
 1.9
 1.5
 3.4
 -0.1
 0.8
9 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 838618 At1g20300 4.5 4.7
 3.1
 237.7
 2.6
 3.0
 2.7
 1.7
 1.2
 2.4
 0.6
 1.1
 0.3
 1.4
 1.0
 2.9
 -0.6
 1.1
10 PP5.2 protein phosphatase 5.2 818881 At2g42810 4.4 3.9
 3.7
 292.9
 2.1
 2.4
 1.6
 2.3
 -1.7
 2.0
 0.2
 0.6
0.3
 0.5
 1.5
 0.8
 2.6
 -0.9
 2.4
11 SNM1 DNA repair metallo-beta-lactamase family protein 822280 At3g26680 4.4 4.4
 3.2
 1001.5
 1.1
 2.8
 0.8
 1.1
 0.3
 3.0
 1.4
 -0.8
 2.2
 -0.0
 -0.3
2.3
 1.5
12 AT3G01820 P-loop containing nucleoside triphosphate hydrolases superfamily protein 821071 At3g01820 4.4 4.2
 3.4
 1067.7
 -0.5
 1.9
 2.5
 0.5
 1.5
 2.0
 -1.3
 0.7
-0.4
 1.2
0.6
 1.7
1.0
 -0.0
 0.5
0.3
 -0.5
 1.1
13 AT3G25120 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 822103 At3g25120 4.3 3.6
 3.8
 949.8
 1.7
 1.9
 1.8
 1.2
 1.3
 1.7
 0.2
 0.6
 2.6
 0.8
 1.0
 -1.7
 2.6
 1.1
14 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesi 831958 At5g18400 4.3 4.4
 3.1
 844.4
 1.1
 2.6
 2.4
 0.8
 2.1
 2.0
 1.5
 0.0
-0.1
 0.0
-1.0
 -0.1
-0.3
 0.8
0.5
 3.4
0.8
 0.0
-0.3
 0.4
-0.6
15 AT4G02220 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein 828106 At4g02220 4.1 4.0
 3.1
 21.4
 2.1
 2.6
 2.6
 2.5
 0.8
 2.0
 -0.5
 1.0
 0.9
 2.0
 1.8
 2.6
 -0.7
 2.4
16 AL7 alfin-like 7 838013 At1g14510 4.1 3.4
 3.7
 42.7
 3.1
 1.9
 3.3
 3.2
 -0.7
 1.0
 2.0
1.0
 1.6
1.4
 0.5
-0.0
 -0.1
-0.1
 3.2
1.8
 3.6
2.6
 1.6
1.4
 1.6
1.1
17 AT1G22200 Endoplasmic reticulum vesicle transporter protein 838825 At1g22200 4.1 4.7
 2.4
 177.8
 -0.6
 1.9
 1.9
 3.0
 0.4
 1.7
 2.2
0.7
 0.7
0.2
 1.6
 0.5
 2.4
-0.0
 0.7
0.3
 0.9
0.2
 -0.8
-1.0
18 CB5-A cytochrome B5 isoform A 839176 At1g26340 4.0 4.1
 2.9
 767.1
 1.4
 1.7
 2.1
 2.5
 0.8
 2.4
 -0.7
 -1.1
 0.2
 0.8
 -0.5
 2.8

19 ESD4 Cysteine proteinases superfamily protein 827269 At4g15880 4.0 3.7
 3.3
 161.1
 1.2
 1.1
 3.3
 2.4
 0.5
 0.4
 2.7
2.2
 1.2
0.5
 0.2
-0.7
 0.4
0.1
 1.2
1.1
 1.9
1.5
 3.1
1.0
 1.7
0.8
20 AT1G18900 Pentatricopeptide repeat (PPR) superfamily protein 838471 At1g18900 4.0 4.4
 2.6
 315.7
 2.1
 2.4
 2.6
 1.1
 1.2
 2.6
 -0.4
-1.1
 -0.4
-0.9
 -0.4
 1.1
 -0.2
 0.1
 -0.4
 0.9
21 AT5G20200 nucleoporin-like protein 832143 At5g20200 4.0 4.2
 2.8
 113.2
 1.9
 2.9
 2.4
 2.6
 -0.6
 1.0
 -1.1
 2.7
2.3
 2.3
 1.6
 1.8
0.7
 1.3

22 AT1G11200 organic solute transporter ostalpha protein (DUF300) 837661 At1g11200 4.0 4.1
 2.9
 830.5
 1.5
 1.8
 1.5
 2.1
 1.2
 3.0
 0.9
-0.3
 1.3
0.3
 -0.1
-0.6
 0.4
-0.2
 -1.1
 0.7
0.4
 0.2
 0.3
23 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein 837723 At1g11780 4.0 3.5
 3.4
 1719.3
 1.0
 1.5
 1.5
 0.0
 0.6
 1.3
 1.1
 0.7
-0.6
 -0.2
 1.0
 0.9
 2.7
 1.2
 0.9
24 ELM1 fission ELM1-like protein (DUF1022) 832295 At5g22350 4.0 4.2






2.2
 1.7
0.9
 2.1
0.8
 1.9
1.5
 1.6
1.0
 0.8
-0.6
 1.0
-1.0
 0.7
0.3
 1.2
-0.0
25 HCC1 electron transport SCO1/SenC family protein 820046 At3g08950 3.9 3.0
 3.8
 8.0
 1.5
 3.6
 3.3
 4.5
 2.0
 2.1
 0.1
 0.4
-0.1
 1.5
 1.1
 1.1
 3.5
 0.1
 1.0
26 AT1G66250 O-Glycosyl hydrolases family 17 protein 842942 At1g66250 3.9 3.6
 3.2
 2891.3
 1.7
 0.8
 0.1
 1.0
 0.3
 3.6
 -0.1
-0.4
 1.7
1.3
 0.4
0.4
 1.0
0.8
 0.8
0.6
 1.2
0.9
 0.0
 0.1
27 UBP24 ubiquitin-specific protease 24 829213 At4g30890 3.9 5.2
 1.5
 126.5
 1.7
 1.9
 5.2
 3.0
 1.6
 4.0
 1.0
 0.4
0.3
 1.0
 0.8
 1.9
 4.0
2.1
 -0.0
 3.7
28 SGA2 ASF1 like histone chaperone 842992 At1g66740 3.9 3.0
 3.8
 671.7
 1.6
 1.3
 0.8
 1.9
 3.4
 1.6
 1.3
-0.7
 -0.4
-0.6
 1.7
0.4
 0.8
0.3
 0.4
 0.7
0.3
 0.7
 -0.3
29 CSN5A COP9 signalosome 5A 838899 At1g22920 3.9 3.8
 3.0
 541.2
 1.6
 1.7
 1.5
 2.6
 0.1
 3.1
 1.6
-0.1
 2.3
 1.3
-0.6
 1.7
1.5
 1.2
0.6
 2.8
-1.0
 -0.8
 -0.3
30 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 835314 At5g52380 3.9 3.6
 3.0
 362.7
 2.6
 2.1
 2.3
 1.8
 1.6
 2.2
 0.3
 2.4
 0.2
 2.7
 0.8
 3.7
 -0.1
 1.0
31 RPAC43 RNA polymerase I subunit 43 842356 At1g60620 3.9 3.2
 3.5
 184.8
 1.3
 2.4
 1.9
 2.2
 -0.5
 1.6
 0.5
-0.3
 -0.4
-0.4
 -0.9
 1.0
 0.5
 3.0
 0.2
 1.0
32 NUP1 nuclear pore complex protein 820234 At3g10650 3.9 4.2
 2.5
 257.5
 1.4
 2.1
 3.1
 2.2
 1.7
 2.6
 -1.1
 2.2
1.4
 1.5
0.3
 1.0
1.0
 0.6
-0.0
 1.8
1.3
 -1.0
 0.5
33 AT1G24267 bZIP transcription factor, putative (DUF1664) 839042 At1g24267 3.9 3.9






0.5
 1.8
0.9
 1.3
1.3
 0.5
0.4
 2.0
1.9
 1.6
 2.7
 1.4
1.4
 0.3
0.3
34 CNX2 cofactor of nitrate reductase and xanthine dehydrogenase 2 817754 At2g31955 3.9 3.0
 3.7
 285.0
 -0.3
 1.2
 1.9
 3.3
 1.7
 1.1
 0.9
 0.8
0.6
 -0.7
 0.2
 0.1
 -0.2
 1.3
0.8
 1.8
1.4
35 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 843814 At1g74750 3.9 3.9
 2.8
 81.8
 1.9
 2.6
 2.2
 3.3
 2.1
 1.6
 -0.4
-1.1
 -0.4
-0.9
 -0.4
 1.1
 -0.2
 0.1
 -0.4
 0.9
36 AT1G48040 Protein phosphatase 2C family protein 841222 At1g48040 3.8 4.2
 2.5
 1932.3
 -0.6
 1.3
 1.1
 0.9
 0.6
 2.0
 -0.3
-0.9
 0.9
-0.0
 -1.2
-1.2
 0.5
0.5
 -0.5
-0.7
 -0.3
-1.1
 0.8
0.7
 1.1
-0.1
37 AT3G57280 Transmembrane proteins 14C 824895 At3g57280 3.8 4.0
 2.6
 240.0
 0.0
 2.9
 3.9
 2.3
 2.3
 2.5
 0.6
 -0.3
-0.4
 -0.3
-2.1
 0.7
0.5
 0.5
 1.8
-1.3
 1.5
0.5
 0.9
0.1
38 AT5G22100 RNA cyclase family protein 832271 At5g22100 3.8 3.9






2.4
 0.3
 -0.7
 1.6
0.5
 1.5
-0.4
 0.2
 3.2
 0.7
 1.9
39 AT3G58510 DEA(D/H)-box RNA helicase family protein 825020 At3g58510 3.8 3.6
 3.0
 690.7
 0.6
 1.7
 1.9
 1.4
 0.7
 1.7
 1.8
1.6
 3.1
2.9
 2.4
1.9
 2.1
2.0
 0.8
0.3
 4.4
0.9
 1.0
-0.0
 2.1
0.8
40 RBP47B RNA-binding protein 47B 821447 At3g19130 3.8 3.9
 2.7
 540.3
 1.0
 3.1
 2.6
 0.9
 1.2
 3.6
 1.8
1.1
 1.2
1.0
 2.0
0.4
 1.6
1.2
 1.4
0.8
 2.3
0.3
 -0.4
-1.8
 0.8
0.1
41 La1 La protein 1 829408 At4g32720 3.8 3.7
 2.9
 27.4
 2.2
 3.5
 2.3
 2.8
 2.3
 2.6
 0.8
0.7
 0.4
0.2
 -0.1
-0.2
 1.7
0.0
 0.7
 3.6
 1.2
-0.0
 2.4
1.2
42 ASE2 GLN phosphoribosyl pyrophosphate amidotransferase 2 829626 At4g34740 3.8 3.2
 3.3
 1121.4
 1.2
 2.3
 2.9
 -0.1
 1.4
 1.7
 1.9
-0.4
 2.9
2.3
 -0.8
-1.7
 1.4
0.9
 2.3
 1.3
 -1.0
-1.3
 1.6
0.1
43 MKK4 mitogen-activated protein kinase kinase 4 841591 At1g51660 3.8 4.1
 2.5
 689.3
 0.4
 2.5
 1.4
 1.5
 1.3
 3.2
 0.3
0.1
 2.3
0.6
 2.1
0.6
 0.7
0.3
 -2.3
 -0.2
 0.9
 0.4
44 RECA2 recA DNA recombination family protein 816468 At2g19490 3.8 3.9






2.6
 1.2
 0.6
-0.5
 0.7
0.2
 0.5
0.1
 1.0
0.8
 4.2
 2.6
-0.2
 2.5
1.1
45 AT1G53760 K+-H+ exchange-like protein 841813 At1g53760 3.8 3.6
 3.0
 41.4
 0.9
 2.5
 3.6
 2.2
 1.8
 2.2
 0.6
 -0.4
-0.8
 0.4
 -0.6
 -0.1
 1.7
 -0.0
 1.8
46 TOM20-2 translocase outer membrane 20-2 839629 At1g27390 3.8 2.6
 3.9
 410.8
 2.2
 2.0
 2.6
 2.0
 2.7
 0.9
 2.8
2.3
 0.4
-0.9
 0.2
-0.9
 0.9
0.4
 0.7
0.5
 3.4
2.3
 0.9
 0.1
47 ATRPAC42 DNA-directed RNA polymerase family protein 842377 At1g60850 3.7 3.7
 2.8
 71.8
 2.6
 2.8
 3.4
 2.3
 1.5
 3.9
 0.5
-0.3
 -0.4
-0.4
 -0.9
 1.0
 0.5
 3.0
 0.2
 1.0
48 AT5G48970 Mitochondrial substrate carrier family protein 834956 At5g48970 3.7 3.6
 2.8
 891.2
 -0.7
 2.9
 4.2
 0.7
 1.2
 2.1
 2.4
0.9
 0.3
-0.2
 0.9
0.4
 0.6
0.5
 0.8
-0.7
 -0.1
-0.5
 -0.7
 0.0
49 AT4G18905 Transducin/WD40 repeat-like superfamily protein 827625 At4g18905 3.7 4.0






4.6
 1.5
 0.8
-0.1
 1.1
 1.2
 1.0
 -0.2
 0.6
 2.1
50 LCB1 long-chain base1 829800 At4g36480 3.7 2.7
 3.7
 1629.7
 1.5
 2.2
 3.4
 0.9
 1.3
 1.8







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