Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT3G22220   hAT transposon superfamily 
 ath-r.6   AT3G22220   hAT transposon superfamily 
 ath-m.9   AT3G22220   hAT transposon superfamily 
 ath-m.4.notissue   AT3G22220   hAT transposon superfamily 
 ath-m.4.tis   AT3G22220   hAT transposon superfamily 
 ath-m.4.str   AT3G22220   hAT transposon superfamily 
 ath-m.4.hor   AT3G22220   hAT transposon superfamily 
 ath-m.4.bio   AT3G22220   hAT transposon superfamily 
 ath-m.4.lig   AT3G22220   hAT transposon superfamily 
 ath-e.1   AT3G22220   hAT transposon superfamily 
 ath-u.4   AT4G15020   hAT transposon superfamily 
 gma-u.4   100817502   uncharacterized LOC100817502 
 ppo-u.4   18099776   uncharacterized LOC18099776 
 ppo-u.4   112324464   uncharacterized LOC112324464 
 ppo-u.4   7490381   uncharacterized LOC7490381 
 mtr-u.4   112419854   uncharacterized LOC112419854 
 sly-u.4   101254391   uncharacterized LOC101254391 
 osa-u.4   4334613   uncharacterized LOC4334613 

close


Top 50 coexpressed genes to AT3G22220 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3040   Spliceosome  4 180 2.96
 ath3008   Ribosome biogenesis in eukaryotes  1 96 -
 ath3018   RNA degradation  1 113 -
 ath3015   mRNA surveillance pathway  1 119 -
 ath4120   Ubiquitin mediated proteolysis  2 155 -

close


ath:AT3G22220 (hAT transposon superfamily) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT3G22220
ath-r.6
for
AT3G22220
ath-m.9
for
AT3G22220
ath-m.4.notissue
for
AT3G22220
ath-m.4.tis
for
AT3G22220
ath-m.4.str
for
AT3G22220
ath-m.4.hor
for
AT3G22220
ath-m.4.bio
for
AT3G22220
ath-m.4.lig
for
AT3G22220
ath-e.1
for
AT3G22220
ath-u.4
for
AT4G15020
gma-u.4
for
100817502
ppo-u.4
for
18099776
ppo-u.4
for
112324464
ppo-u.4
for
7490381
mtr-u.4
for
112419854
sly-u.4
for
101254391
osa-u.4
for
4334613
1 AT4G15020 hAT transposon superfamily 827161 At4g15020 7.5 8.2
 4.7
 203.0
 2.1
 2.2
 0.2
 2.0
 2.7
 4.8
 7.5
3.2
2.8
 3.2
2.1
 2.8
2.1


2 FHY3 far-red elongated hypocotyls 3 821781 At3g22170 6.7 5.9
 5.7
 2.0
 1.9
 2.7
 3.4
 4.8
 1.7
 2.8
 5.5
 5.1
3.4
 0.5
0.4
 1.5
0.9
 0.7
0.5
 1.3
 0.0
3 SPT16 global transcription factor C 826665 At4g10710 6.6 6.3
 5.1
 1.0
 4.4
 3.9
 5.4
 5.2
 1.3
 3.3
 4.1
 3.7
2.3
 2.7
1.6
 3.2
2.9
 2.5
1.7
 3.3
2.3
 1.1
0.6
 3.2
4 TKI1 TSL-kinase interacting protein 1 818270 At2g36960 6.1 5.5
 5.0
 646.2
 0.5
 3.7
 0.7
 3.4
 -0.6
 2.6
 3.9
 2.1
1.3
 1.6
1.5
 0.7
0.4
 1.3
0.4
 1.7
 -0.1
 1.7
-0.1
5 AT3G62330 Zinc knuckle (CCHC-type) family protein 825406 At3g62330 6.0 5.2
 5.2
 136.1
 2.1
 4.7
 1.7
 1.3
 -1.1
 1.4
 3.1
 3.3
2.4
 0.4
0.1
 1.6
0.9
 1.7
1.5
 2.8
 1.8
 1.5
6 XI-I myosin 829456 At4g33200 5.7 5.8
 4.0
 345.7
 3.2
 1.2
 0.7
 2.3
 0.8
 2.5
 5.7
 2.4
2.3
 2.3
 0.5
 3.7
 1.2
0.7
 1.7
 2.2
0.2
7 VIP5 plus-3 domain-containing protein 842395 At1g61040 5.6 4.6
 5.1
 17.9
 3.1
 1.5
 3.5
 5.8
 0.8
 2.7
 1.7
 3.3
2.6
 1.0
0.5
 2.2
0.5
 1.4
0.7
 2.8
2.0
 0.7
 1.5
8 CUL3 cullin 3 839226 At1g26830 5.5 5.4
 4.2
 6.9
 1.2
 4.0
 3.0
 3.3
 1.2
 3.3
 3.5
3.1
 2.3
2.2
 1.4
-0.6
 2.2
1.7
 1.5
0.5
 2.3
1.5
 1.2
1.1
 1.7
1.2
9 AT4G31880 transcriptional regulator 829318 At4g31880 5.5 4.2
 5.2
 20.4
 3.5
 1.6
 2.7
 4.1
 1.1
 2.4
 3.8
2.4
 3.8
3.0
 1.8
1.0
 2.7
1.5
 2.1
1.7
 3.4
2.4
 0.5
0.5
 3.1
1.4
10 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B protein 817233 At2g26920 5.4 4.7
 4.6
 328.6
 1.3
 1.2
 1.8
 3.0
 0.9
 1.7
 3.3
1.5
 2.0
1.7
 1.5
1.3
 2.2
1.8
 1.9
1.2
 2.5
1.0
 2.1
0.1
 3.3
11 CUL3B cullin 3B 843303 At1g69670 5.4 5.9
 3.4
 47.0
 2.0
 2.3
 4.1
 2.1
 2.5
 3.3
 3.5
3.1
 2.3
2.2
 1.4
-0.6
 2.2
1.7
 1.5
0.5
 2.3
1.5
 1.2
1.1
 1.7
1.2
12 AT5G46070 Guanylate-binding family protein 834648 At5g46070 5.3 4.4
 4.8
 267.9
 2.4
 0.0
 1.8
 2.2
 1.6
 1.6
 3.2
 2.9
1.9
 2.3
1.5
 1.7
1.4
 3.2
1.2
 2.4
 1.5
0.2
 1.5
1.3
13 SNL5 SIN3-like 5 842283 At1g59890 5.3 6.1
 3.0
 429.0
 1.6
 0.9
 1.1
 3.3
 -0.5
 2.9
 3.6
3.3






14 AT4G29420 F-box/RNI-like superfamily protein 829063 At4g29420 5.3 5.2
 3.9
 735.7
 0.3
 2.9
 0.1
 2.3
 -0.5
 2.5
 3.6
 2.8


2.2
0.5
15 AT1G09730 Cysteine proteinases superfamily protein 837501 At1g09730 5.2 4.6
 4.4
 218.9
 3.1
 3.0
 0.9
 3.3
 0.7
 3.3
 2.9
0.9
 2.4
1.8
 2.4
1.4
 2.1
1.3
 3.4
2.2
 2.7
1.8
 2.1
-0.2
 2.5
16 SMP1 Pre-mRNA splicing Prp18-interacting factor 842877 At1g65660 5.2 4.8
 4.1
 94.5
 1.2
 2.7
 3.0
 2.3
 0.6
 2.5
 1.3
1.2
 2.2
0.7
 0.9
-0.3
 1.6
0.9
 0.6
-1.2
 2.7
 1.2
0.8
 0.8
17 FUS12 proteasome family protein 817241 At2g26990 5.2 5.3
 3.7
 105.4
 1.7
 0.7
 3.5
 2.6
 2.0
 1.8
 3.0
 0.2
0.0
 1.0
0.9
 0.9
-0.2
 0.7
0.1
 2.3
 1.3
1.0
 1.1
18 AT5G64270 splicing factor 836548 At5g64270 5.2 4.9
 4.0
 364.6
 2.1
 0.7
 1.9
 2.5
 0.2
 2.9
 4.5
 1.6
1.4
 3.2
3.1
 3.1
1.2
 3.1
1.6
 3.1
 2.0
 2.4
19 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 838344 At1g17680 5.0 5.0
 3.7
 96.2
 1.8
 3.0
 1.2
 2.6
 0.2
 1.7
 1.3
 2.3
0.1


2.0
1.6
 1.4
 1.3
20 AT3G09670 Tudor/PWWP/MBT superfamily protein 820124 At3g09670 5.0 3.7
 4.8
 158.3
 1.7
 0.9
 3.5
 2.7
 0.9
 1.9
 3.9
0.7
 5.8
2.2
 1.4
0.2
 3.0
2.0
 3.2
2.4
 4.0
3.3
 0.9
-0.2
 0.4
0.3
21 AT3G17740 uncharacterized protein 821042 At3g17740 4.9 4.9
 3.6
 205.2
 3.9
 2.6
 0.4
 3.6
 0.5
 2.7
 3.0
2.3
 2.8
2.4
 2.4
 1.3
 2.3
 0.2
 -0.5
 0.8
22 RH8 RNAhelicase-like 8 828042 At4g00660 4.9 4.3
 4.2
 556.5
 3.4
 2.2
 0.7
 2.0
 1.9
 1.4
 4.2
3.7
 1.0
1.0
 1.9
1.9
 1.3
1.0
 1.8
1.5
 3.3
2.8
 1.7
1.0
 2.5
0.9
23 NRPB2 DNA-directed RNA polymerase family protein 828259 At4g21710 4.8 4.8
 3.6
 59.1
 3.6
 3.2
 1.2
 2.3
 0.3
 4.0
 2.5
 2.9
1.4
 2.5
 1.6
 2.1
 3.1
 1.8
-0.1
 2.0
24 AT5G12400 PHD-finger and DNA binding domain-containing protein 831115 At5g12400 4.8 5.1
 3.2
 354.2
 2.5
 2.1
 0.4
 2.5
 0.8
 2.8
 3.8
 3.7
3.5
 1.3
0.9
 2.1
1.0
 3.4
3.3
 4.0
 0.6
 1.4
25 GTE4 global transcription factor group E4 837133 At1g06230 4.8 3.9
 4.4
 163.3
 1.9
 0.9
 3.1
 3.8
 0.6
 2.4
 4.6
2.6
 4.2
3.6
 2.5
0.9
 2.3
1.5
 1.9
1.8
 2.9
2.7
 1.0
0.4
 2.6
1.1
26 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family protein 821872 At3g22980 4.8 3.8
 4.5
 572.2
 0.9
 0.9
 0.7
 2.3
 0.7
 2.6
 2.7
 2.4
 1.1
 1.6
 0.7
 2.7
 2.3
 1.7
27 SYN4 sister chromatid cohesion 1 protein 4 831487 At5g16270 4.8 4.4
 3.9
 10.9
 2.5
 4.1
 3.5
 3.1
 2.8
 2.4
 6.0
 4.3
3.3
 1.4
1.2
 1.8
1.7
 2.2
2.1
 2.8
 0.9
 1.2
28 FES1 Zinc finger C-x8-C-x5-C-x3-H type family protein 817951 At2g33835 4.8 5.0






2.0
 3.6





0.7
29 AT1G17930 Aminotransferase-like, plant mobile domain family protein 838372 At1g17930 4.8 4.5
 3.7
 798.0
 3.2
 3.1
 0.3
 1.1
 1.2
 1.0
 3.1
2.2
 1.9
1.3
 1.2
0.9
 1.6
1.5
 2.8
1.7
 2.4
 1.7
0.3
 0.9
30 AT3G45830 nuclear factor kappa-B-binding-like protein 823726 At3g45830 4.7 5.2
 2.9
 353.4
 1.8
 2.2
 1.8
 2.1
 0.3
 4.1
 2.1
 4.0
 1.7
1.4
 2.8
2.1
 3.0
1.5
 3.9
 1.5
 2.8
31 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 822392 At3g27700 4.7 5.7
 2.4
 1060.8
 0.8
 2.0
 0.8
 1.5
 -0.8
 3.1
 5.4
 0.9
0.4
 2.5
 2.3
 2.0
 1.9
 0.7
0.0
 2.4
32 AT3G54190 Transducin/WD40 repeat-like superfamily protein 824586 At3g54190 4.7 4.1
 4.0
 250.7
 1.5
 1.3
 1.8
 1.6
 2.2
 4.1
 4.6
0.2
 5.0
3.1
 -0.6
-0.9
 0.7
0.3
 0.5
0.1
 2.5
1.5
 1.5
1.0
 1.2
0.9
33 MBD9 methyl-CPG-binding domain 9 821132 At3g01460 4.6 4.4
 3.6
 180.4
 1.8
 2.6
 1.0
 2.4
 3.1
 2.7
 3.9
 2.3
2.2
 2.5
 2.0
 2.0
 2.7
 1.1
 1.8
34 ATG3 autophagy 3 (APG3) 836271 At5g61500 4.6 3.2
 4.8
 63.5
 0.7
 2.0
 2.9
 4.0
 1.3
 1.3
 2.7
 1.4
1.1
 -0.1
-0.4
 0.9
0.6
 0.6
-0.4
 1.4
 -1.9
 0.3
35 AT3G17450 hAT dimerization domain-containing protein 821009 At3g17450 4.6 4.8
 3.3
 209.6
 3.0
 2.7
 -0.1
 1.9
 1.7
 3.1
 3.2
 3.5
2.8
 0.2
0.1
 0.7
0.4
 1.7
1.2
 2.0

36 AT5G56420 F-box/RNI-like/FBD-like domains-containing protein 835743 At5g56420 4.6 5.0






2.4
 3.8
2.6
 2.3
1.4


1.8
1.7
 1.7
0.7
 -0.4
37 TOP1ALPHA DNA topoisomerase I alpha 835623 At5g55300 4.6 4.6
 3.5
 62.4
 3.0
 1.6
 2.7
 2.2
 1.1
 1.9
 2.3
1.9
 3.1
2.8
 0.9
0.2
 1.0
0.9
 1.5
1.1
 2.8
2.1
 2.6
 2.5
38 PP2AA3 protein phosphatase 2A subunit A3 837892 At1g13320 4.6 5.4
 2.6
 1947.5
 0.7
 0.9
 1.7
 1.1
 1.1
 4.7
 6.3
3.7
 2.0
1.5
 1.3
0.7
 0.7
0.5
 -0.3
-0.7
 3.4
1.3
 0.6
0.5
 1.0
39 AT1G56290 CwfJ-like family protein 842082 At1g56290 4.6 5.0
 2.9
 1885.4
 1.7
 0.5
 0.2
 2.1
 -0.5
 1.4
 2.1
 4.2
3.5
 2.2
 1.6
 1.0
 3.1
 0.8
 1.6
40 ILP1 GC-rich sequence DNA-binding factor-like protein 830755 At5g08550 4.6 4.1
 3.8
 99.1
 2.5
 2.0
 1.2
 3.0
 0.7
 2.3
 5.4
 1.4
0.6
 1.7
 2.3
 1.0
 2.6
 1.8
 3.6
41 AT3G09850 D111/G-patch domain-containing protein 820143 At3g09850 4.6 3.6
 4.3
 557.3
 1.1
 1.2
 2.3
 2.7
 -0.6
 3.6
 1.5
 2.6
2.0
 0.4
 0.3
 0.6
 1.7
 0.6
 0.9
42 AT1G58025 DNA-binding bromodomain-containing protein 842169 At1g58025 4.5 4.6






0.7
 2.4
 1.9
-0.0
 0.9
 0.9
 1.8
 3.1
 1.5
 1.7
1.7
43 GC6 golgin Putative 6 822375 At3g27530 4.5 3.3
 4.6
 13.7
 2.7
 5.5
 2.3
 3.5
 1.3
 1.0
 2.6
 2.6
1.0
 0.6
 -0.3
 1.0
 2.8
 -0.4
 0.1
44 LFR ARM repeat superfamily protein 821873 At3g22990 4.5 4.4
 3.4
 15.6
 3.5
 1.6
 2.1
 3.2
 2.5
 2.6
 4.9
 1.6
1.3
 1.2
 0.8
 1.0
 1.7
 1.7
-0.6
 1.0
45 AT5G41770 crooked neck protein, putative / cell cycle protein 834182 At5g41770 4.5 5.2
 2.6
 71.6
 1.4
 1.1
 4.3
 3.0
 0.8
 2.4
 5.7
 1.7
0.8
 2.5
0.9
 3.0
1.8
 1.9
1.7
 3.9
 1.7
0.1
 2.7
46 MAD1 mitotic checkpoint family protein 835051 At5g49880 4.5 3.7
 4.2
 44.5
 3.6
 1.6
 2.9
 2.1
 1.1
 1.4
 1.4
 1.0
0.6
 1.5
1.4
 0.4
-0.0
 1.5
0.5
 0.9
 1.7
 1.8
47 AT2G34730 myosin heavy chain-like protein 818038 At2g34730 4.5 4.6






3.0
 3.1




0.9
 0.8
48 AT5G18420 CCR4-NOT transcription complex subunit 831960 At5g18420 4.5 4.5
 3.2
 292.3
 3.1
 1.1
 1.7
 1.9
 1.6
 2.6
 3.9
 1.3
-0.3
 1.6
0.7
 0.4
-0.5
 2.2
1.1
 1.4
 1.1
 2.0
0.7
49 ESP3 RNA helicase family protein 840143 At1g32490 4.5 4.5
 3.2
 820.4
 2.2
 1.1
 0.4
 2.8
 0.1
 2.5
 2.5
1.0
 1.6
1.6
 2.5
 1.6
 2.0
 3.2
1.7
 2.0
0.1
 1.8
50 ASG3 SNF2 domain-containing protein / helicase domain-containing protein 819106 At2g44980 4.5 4.3
 3.4
 1799.5
 0.3
 2.5
 0.9
 1.2
 -0.9
 1.6
 2.8
 1.9
 1.2
 -0.2
 2.8
 1.8
1.0
 0.2
 0.3
The preparation time of this page was 1.0 [sec].