Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.notissue   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.tis   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.str   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.hor   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.bio   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.lig   PIL2   phytochrome interacting factor 3-like 2 
 ath-u.4   PIL1   phytochrome interacting factor 3-like 1 

close


Top 50 coexpressed genes to PIL2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath904   Diterpenoid biosynthesis; Including: Gibberellin biosynthesis  1 21 -
 ath630   Glyoxylate and dicarboxylate metabolism  1 78 -
 ath4016   MAPK signaling pathway - plant  3 139 -
 ath500   Starch and sucrose metabolism  1 172 -
 ath4075   Plant hormone signal transduction  4 291 -

close


ath:PIL2 (phytochrome interacting factor 3-like 2) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.9
for
PIL2
ath-m.4.notissue
for
PIL2
ath-m.4.tis
for
PIL2
ath-m.4.str
for
PIL2
ath-m.4.hor
for
PIL2
ath-m.4.bio
for
PIL2
ath-m.4.lig
for
PIL2
ath-u.4
for
PIL1
1 E12A11 PEBP (phosphatidylethanolamine-binding protein) family protein 838390 At1g18100 4.5 34.6
 2.3
 2.2
 2.5
 1.9
 1.0
 -0.0
2 LOG5 Putative lysine decarboxylase family protein 829672 At4g35190 4.4 107.2
 -0.4
 3.8
 4.2
 2.0
 0.5
 0.3
-0.3
3 HB52 homeobox protein 52 835481 At5g53980 4.2 4663.1
 0.7
 1.2
 0.6
 0.4
 1.4
 2.0
4 MYB10 myb domain protein 10 820464 At3g12820 4.0 4797.3
 2.3
 -1.1
 0.9
 1.6
 0.8
 2.4
5 AT1G48690 Auxin-responsive GH3 family protein 841291 At1g48690 3.9 8718.9
 0.7
 -0.2
 0.5
 1.0
 -0.2
6 MYB67 myb domain protein 67 820454 At3g12720 3.7 1604.3
 4.4
 1.3
 1.5
 2.3
 1.4
7 CYP718 cytochrome P450, family 718 818885 At2g42850 3.5 11765.1
 1.3
 -0.6
 -0.6
 1.7
 1.3
 -0.4
8 MYB305 myb domain protein 305 822019 At3g24310 3.5 2325.7
 0.7
 1.4
 2.4
 0.6
 -1.3
9 EEL Basic-leucine zipper (bZIP) transcription factor family protein 818706 At2g41070 3.5 233.4
 2.7
 1.3
 0.8
 0.2
 0.5
 1.3
-0.0
10 AT3G61410 U-box kinase family protein 825313 At3g61410 3.4 1485.9
 1.4
 0.1
 1.6
 1.9
 0.8
 -0.0
-0.7
11 AT4G35720 DUF241 domain protein, putative (DUF241) 829724 At4g35720 3.3 14179.9
 1.1
 -0.2
 0.1
 0.1
 1.1
 3.1
0.3
12 AT5G07570 glycine/proline-rich protein 830650 At5g07570 3.3 6117.5
 1.4
 -0.1
 1.2
 2.2
 -0.2
13 AT4G24480 Protein kinase superfamily protein 828550 At4g24480 3.3 581.2
 0.4
 2.5
 3.1
 1.8
 0.3
 -0.8
14 AT1G63240 uncharacterized protein 842629 At1g63240 3.3 52.0
 1.4
 2.0
 2.3
 1.0
 1.3
 0.2
15 GA20OX2 gibberellin 20 oxidase 2 835256 At5g51810 3.3 13200.5
 0.6
 -0.6
 1.4
 2.0
 0.5
 2.6
1.7
16 HIPP27 Heavy metal transport/detoxification superfamily protein 836743 At5g66110 3.3 15.7
 2.9
 2.3
 2.5
 1.2
 2.0
 1.7
1.6
17 iqd15 IQ-domain 15 824100 At3g49380 3.2 459.9
 1.8
 1.7
 0.6
 1.1
 0.7
18 AT5G02580 argininosuccinate lyase 831095 At5g02580 3.1 1349.5
 1.2
 0.1
 2.1
 0.6
 1.3
 4.0
2.8
19 HB-2 homeobox protein 2 827384 At4g16780 3.1 2847.5
 0.4
 -0.1
 0.1
 0.8
 1.0
 7.0
1.6
20 AT4G10890 DDE family endonuclease 826688 At4g10890 3.1 2337.8
 1.3
 0.1
 0.9
 0.9
 1.5
 1.0
21 HIS1-3 histone H1-3 816317 At2g18050 3.1 278.2
 1.2
 1.9
 2.8
 0.4
 -0.6
 0.8
-0.1
22 AT4G39720 VQ motif-containing protein 830127 At4g39720 3.1 3106.2
 1.7
 0.6
 2.4
 1.9
 1.1
 1.2
23 LBD16 lateral organ boundaries-domain 16 818843 At2g42430 3.1 2284.8
 3.2
 2.1
 1.5
 1.7
 0.1
 -0.1
24 AT1G27620 HXXXD-type acyl-transferase family protein 839654 At1g27620 3.1 403.2
 0.4
 2.0
 0.4
 1.8
 0.7
 0.1
25 TPPI Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 830874 At5g10100 3.1 159.8
 0.7
 2.8
 2.9
 2.2
 0.5
 1.3
1.3
26 GRF7 growth-regulating factor 7 835447 At5g53660 3.0 320.4
 1.6
 2.5
 0.4
 1.3
 1.6
 1.0
27 AT2G19200 816437 At2g19200 3.0 851.7
 1.1
 2.4
 1.0
 1.8
 1.3
28 AT1G49570 Peroxidase superfamily protein 841381 At1g49570 3.0 1541.9
 0.8
 1.4
 0.7
 2.4
 0.9
 -0.4
29 ERF12 ERF domain protein 12 839732 At1g28360 3.0 151.2
 2.0
 0.3
 1.3
 2.2
 2.0
 -0.2
30 RAX2 Duplicated homeodomain-like superfamily protein 818262 At2g36890 3.0 5863.6
 0.7
 0.3
 0.6
 -0.0
 -0.6
 0.4
0.1
31 NAC089 NAC domain containing protein 89 832289 At5g22290 2.9 500.1
 2.0
 1.8
 2.2
 0.4
 -0.1
 0.9
0.6
32 IAA29 indole-3-acetic acid inducible 29 829361 At4g32280 2.9 6049.7
 1.0
 0.4
 -0.2
 0.4
 1.7
 3.2
33 AT5G40100 Disease resistance protein (TIR-NBS-LRR class) family 834007 At5g40100 2.9 295.2
 1.5
 1.1
 1.6
 1.0
 1.0
34 AT4G36000 Pathogenesis-related thaumatin superfamily protein 829756 At4g36000 2.9 3411.3
 0.7
 0.3
 1.0
 1.6
 0.6
 -0.3
-0.9
35 GOX3 Aldolase-type TIM barrel family protein 827563 At4g18360 2.9 1219.3
 1.2
 2.6
 1.5
 0.5
 0.4
 0.3
0.2
36 MYB9 myb domain protein 9 831540 At5g16770 2.9 151.7
 3.1
 2.3
 3.1
 1.9
 0.2
37 MYB107 myb domain protein 107 821178 At3g02940 2.9 203.2
 2.8
 2.1
 2.7
 1.5
 0.6
38 CKX1 cytokinin oxidase/dehydrogenase 1 818749 At2g41510 2.9 10139.0
 -0.0
 -0.8
 -0.2
 2.5
 4.4
39 AT5G44920 Toll-Interleukin-Resistance (TIR) domain family protein 834522 At5g44920 2.9 9972.2
 0.7
 -0.2
 0.1
 2.7
 -0.2
40 AT1G11270 F-box and associated interaction domains-containing protein 837669 At1g11270 2.9 405.4
 1.5
 0.9
 0.8
 1.8
 1.9
 0.2
-0.5
41 AT5G42690 transcription factor, putative (Protein of unknown function, DUF547) 834278 At5g42690 2.9 244.9
 2.5
 -0.7
 1.0
 1.8
 -1.5
 1.2
-0.0
42 CYP708A1 cytochrome P450 family protein 842045 At1g55940 2.9 861.2
 1.9
 1.6
 0.8
 1.5
 0.4
43 EXO70G2 exocyst subunit exo70 family protein G2 841589 At1g51640 2.9 158.1
 2.2
 2.5
 3.7
 1.2
 2.6
44 EBF2 EIN3-binding F box protein 2 832607 At5g25350 2.9 7754.7
 2.3
 0.0
 -0.2
 -0.0
 1.0
 -0.1
-0.6
45 SNRK2.9 SNF1-related protein kinase 2.9 816833 At2g23030 2.9 405.9
 0.9
 2.7
 1.3
 0.6
 -0.4
 3.1
0.6
46 HB40 homeobox protein 40 829827 At4g36740 2.9 766.5
 0.3
 1.8
 2.5
 1.4
 0.6
 2.0
47 AT2G11240 3768343 At2g11240 2.9 2505.4
 1.6
 -0.0
 1.4
 1.4
 1.2
48 RTE1 protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778) 817148 At2g26070 2.9 1091.4
 0.8
 1.9
 0.3
 0.1
 2.4
 0.1
49 ABCG10 ABC-2 type transporter family protein 841761 At1g53270 2.9 433.6
 3.6
 1.6
 2.5
 1.1
 1.4
 0.0
50 FHL far-red-elongated hypocotyl1-like protein 830832 At5g02200 2.8 15304.3
 -0.5
 -0.9
 1.1
 1.6
 0.7
 3.3
0.5
The preparation time of this page was 1.0 [sec].