Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT4G08510   mediator of RNA polymerase II transcription subunit-like protein 
 ath-r.6   AT4G08510   mediator of RNA polymerase II transcription subunit-like protein 
 ath-e.1   AT4G08510   mediator of RNA polymerase II transcription subunit-like protein 
 ath-u.4   AT1G36990   C-jun-amino-terminal kinase-interacting protein 
 gma-u.4   100812026   mediator of RNA polymerase II transcription subunit 1 
 gma-u.4   100800475   mediator of RNA polymerase II transcription subunit 1 
 gma-u.4   100799079   mediator of RNA polymerase II transcription subunit 1 
 ppo-u.4   7463182   uncharacterized LOC7463182 
 ppo-u.4   7460929   mediator of RNA polymerase II transcription subunit 1 
 mtr-u.4   11411397   mediator of RNA polymerase II transcription subunit 1 
 mtr-u.4   25488392   stomatal closure-related actin-binding protein 3 
 mtr-u.4   11436047   mediator of RNA polymerase II transcription subunit 1 
 sly-u.4   101262360   uncharacterized LOC101262360 
 sly-u.4   101263472   uncharacterized LOC101263472 
 sly-u.4   101259017   uncharacterized LOC101259017 

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Top 50 coexpressed genes to AT4G08510 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3015   mRNA surveillance pathway  5 115 4.98
 ath670   One carbon pool by folate  1 21 -
 ath260   Glycine, serine and threonine metabolism  1 70 -
 ath460   Cyanoamino acid metabolism  1 71 -
 ath630   Glyoxylate and dicarboxylate metabolism  1 78 -

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ath:AT4G08510 (mediator of RNA polymerase II transcription subunit-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT4G08510
ath-r.6
for
AT4G08510
ath-e.1
for
AT4G08510
ath-u.4
for
AT1G36990
gma-u.4
for
100812026
gma-u.4
for
100800475
gma-u.4
for
100799079
ppo-u.4
for
7463182
ppo-u.4
for
7460929
mtr-u.4
for
11411397
mtr-u.4
for
25488392
mtr-u.4
for
11436047
sly-u.4
for
101262360
sly-u.4
for
101263472
sly-u.4
for
101259017
1 AT1G36990 C-jun-amino-terminal kinase-interacting protein 840609 At1g36990 9.6 10.6
 6.0
 9.6
 9.1
7.1
 13.1
6.8
 13.1
8.0
 7.6
 7.6
 8.6
0.5
 0.5
0.1
 8.6
0.1
 6.4
4.4
 6.4
6.1
 6.1
4.4
2 AT4G24200 Transcription elongation factor (TFIIS) family protein 828521 At4g24200 6.7 6.9
 4.2
 11.1
 4.8
4.2
 3.6
3.2
 4.8
4.4
 2.5
2.3
 4.1
1.9
 3.4
 0.3
 3.8
 2.4
 3.2
 2.7
3 NAC082 NAC domain containing protein 82 830792 At5g09330 6.4 6.6
 3.5
 4.2
-0.1
 3.5
3.4
 3.5
2.5
 3.3
2.7
 1.7
1.2
 1.7
1.5
 2.4
1.7
 0.5
0.1
 2.0
1.5
 3.5
1.5
 0.9
0.3
 2.5
1.4
4 LARP1c winged-helix DNA-binding transcription factor family protein 829743 At4g35890 5.6 5.7
 5.1
 5.0
3.7
 5.5
4.7
 3.3
2.6
 4.1
3.9
 3.1
2.6
 3.1
2.1
 3.5
2.9
 0.1
-0.2
 3.4
2.9
 2.9
2.4
 3.8
2.8
 3.9
3.8
5 AT3G09100 mRNA capping enzyme family protein 820064 At3g09100 5.5 5.8
 3.7
 6.7
3.7
 3.4
3.3
 3.6
3.0
 3.5
2.9
 2.5
2.3
 3.0
1.4
 2.5
1.7
 1.3
0.5
 2.4
1.9
 1.7
1.6
 1.6
1.6
 2.6
1.2
6 AT5G04670 Enhancer of polycomb-like transcription factor protein 830344 At5g04670 5.5 5.7
 6.0
 5.3
 3.1
2.6
 4.5
3.9
 6.0
5.1
 5.0
4.8
 4.4
3.5
 3.1
2.5
 1.2
-0.3
 2.5
2.2
 4.3
 2.4
 4.0
7 NUP1 nuclear pore complex protein 820234 At3g10650 5.4 5.4
 5.4
 6.5
 7.4
5.1
 5.0
4.9
 6.4
6.3
 5.2
3.4
 5.3
4.8
 4.0
2.7
 -0.7
-0.8
 2.7
2.6
 1.9
1.6
 0.7
0.6
 2.9
2.3
8 UBP2 ubiquitin-specific protease 2 839397 At1g04860 5.4 5.6
 5.8
 5.9
 2.2
1.8
 1.3
0.9
 3.7
2.6
 2.9
2.6
 3.0
1.8
 3.8
 -0.2
 3.5
 0.8
0.4
 1.6
1.3
 1.1
1.1
9 GTE4 global transcription factor group E4 837133 At1g06230 5.3 5.5
 3.2
 6.5
3.6
 4.6
4.2
 3.0
3.0
 3.8
3.6
 2.7
1.4
 2.2
1.9
 4.2
4.2
 0.4
-0.6
 4.0
3.6
 3.5
2.8
 3.2
2.5
 5.2
1.8
10 UBP24 ubiquitin-specific protease 24 829213 At4g30890 5.0 5.4
 3.1
 6.3
 5.0
2.9
 4.4
2.7
 5.8
4.0
 1.7
 1.9
 3.4
 0.3
 3.8
 3.3
1.7
 3.9
1.0
 3.2
1.6
11 AT3G07660 flocculation protein (DUF1296) 819957 At3g07660 5.0 5.4
 3.1
 8.2
 5.8
5.1
 3.9
3.6
 5.5
5.4
 3.0
1.3
 3.4
2.0
 2.9
 -1.4
 4.4
 3.4
2.8
 1.8
1.0
 2.7
1.9
12 AT3G51620 PAP/OAS1 substrate-binding domain superfamily 824325 At3g51620 5.0 5.5
 3.3
 4.9
1.8
 1.8
1.7
 1.9
1.3
 1.9
1.1
 1.8
0.8
 1.6
1.3
 3.2
2.2
 0.2
-0.0
 3.3
2.5
 2.8
1.8
 1.7
1.3
 1.9
1.4
13 AGL18 AGAMOUS-like 18 824906 At3g57390 5.0 5.4
 1.4
 2.7
0.3
 0.9
-0.2
 0.8
-0.3
 0.3
-0.2




1.0
 0.3
 0.4
14 UPF3 Smg-4/UPF3 family protein 840295 At1g33980 5.0 5.4
 2.0
 4.0
 2.8
2.6
 2.6
2.1
 2.2
1.9
 4.2
1.8
 3.3
2.3
 2.4
1.4
 0.7
0.7
 3.0
2.4
 2.4
2.3
 2.9
2.8
 3.8
1.7
15 AT1G55820 lysine-specific demethylase, putative (DUF1296) 842032 At1g55820 5.0 5.0
 1.8
 4.9
1.1










16 AT5G08560 transducin family protein / WD-40 repeat family protein 830756 At5g08560 5.0 5.3
 4.6
 4.3
 1.4
1.3
 2.2
1.9
 2.4
1.7
 1.7
0.3
 1.6
0.6
 1.5
1.0
 -0.3
-0.8
 0.7
0.6
 3.4
0.9
 3.0
2.0
 2.6
0.6
17 AT1G26370 RNA helicase family protein 839179 At1g26370 5.0 4.8
 3.7
 4.4
 2.6
2.3
 2.9
2.0
 3.5
3.5
 2.0
 1.7
 3.0
2.2
 0.4
-0.5
 3.0
2.3
 1.6
 2.5
 1.9
18 AT3G63070 Tudor/PWWP/MBT domain-containing protein 825482 At3g63070 4.9 4.9
 5.5
 5.4
5.4
 4.4
3.5
 2.8
1.9
 3.9
3.5
 2.2
 2.7
 2.8
2.4
 0.7
0.3
 3.1
2.9
 2.4
 1.7
 1.3
19 AT5G01290 mRNA capping enzyme family protein 831240 At5g01290 4.9 5.1
 3.0
 6.7
3.7
 3.4
3.3
 3.6
3.0
 3.5
2.9
 2.5
2.3
 3.0
1.4
 2.5
1.7
 1.3
0.5
 2.4
1.9
 1.7
1.6
 1.6
1.6
 2.6
1.2
20 MET18 ARM repeat superfamily protein 834864 At5g48120 4.8 4.8
 1.8
 1.7
 1.4
-0.1
 1.4
-0.1
 2.4
0.6
 1.4
 1.9
 1.7
0.0
 1.2
-0.5
 2.0
-1.9
 1.1
 -0.1
 2.3
21 NAC050 NAC domain containing protein 50 820212 At3g10480 4.7 5.1
 2.1
 4.6
3.3
 2.2
1.3
 1.5
1.4
 2.0
1.3
 0.0
 -0.8
 2.1
 -0.2
 2.2
 2.4
1.6
 2.5
0.5
 0.7
-0.1
22 ABCB20 P-glycoprotein 20 824698 At3g55320 4.7 4.7
 3.9
 4.8
1.9
 5.5
4.4
 3.8
3.3
 4.7
4.0
 5.0
1.5
 6.4
1.7
 2.6
2.5
 -0.3
-1.0
 2.8
2.3
 2.2
 1.1
 1.2
23 NAF1 nuclear assembly factor 1 839468 At1g03530 4.7 4.9
 4.4
 4.4
 1.6
1.4
 2.5
2.4
 3.8
3.1
 1.2
-0.5
 1.5
0.3
 2.0
1.9
 0.0
-1.0
 1.6
1.1
 1.7
 0.9
 1.1
24 AT3G22270 Topoisomerase II-associated protein PAT1 821797 At3g22270 4.7 5.0
 5.5
 6.6
5.9
 5.5
5.5
 4.7
3.7
 7.4
5.3
 3.7
3.7
 5.3
3.3
 4.0
3.0
 -0.2
-0.4
 3.7
3.0
 3.3
2.4
 3.3
2.8
 3.6
3.5
25 NPGR2 no pollen germination related 2 828978 At4g28600 4.7 4.7
 3.5
 5.5
 2.3
1.9
 2.0
1.6
 1.3
1.1
 2.4
1.4
 2.4
0.4
 2.0
1.2
 0.6
0.2
 2.2
2.1
 1.0
0.3
 3.0
2.1
 2.6
1.8
26 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 843814 At1g74750 4.6 4.6
 1.4
 3.5
3.4
 3.8
3.1
 3.2
2.1
 3.1
2.7
 2.2
 2.5
 3.3
 -0.0
 3.6
 2.5
 1.9
 1.6
27 AT5G40880 WD-40 repeat family protein / zfwd3 protein (ZFWD3) 834089 At5g40880 4.6 5.0
 1.1
 3.5










28 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 822392 At3g27700 4.6 4.8
 3.2
 6.5
 7.4
3.9
 5.4
4.1
 6.1
6.0
 4.3
 3.1
 5.5
 -0.6
 4.5
 4.9
1.9
 3.3
2.1
 1.7
0.6
29 AT3G12130 KH domain-containing protein / zinc finger (CCCH type) family protein 820388 At3g12130 4.6 5.0
 3.6
 4.5
0.4
 3.1
3.0
 2.7
1.8
 3.6
2.5
 1.7
1.2
 1.3
1.2
 3.9
0.9
 -0.7
-1.1
 4.1
2.4
 3.8
3.7
 2.0
1.6
 2.4
2.1
30 AT5G52530 dentin sialophosphoprotein-like protein 835329 At5g52530 4.6 4.5
 4.8
 5.8










31 AT5G03970 F-box associated ubiquitination effector family protein 830276 At5g03970 4.6 5.1
 1.6
 2.9
 0.2
 0.7
 0.8
 0.1
 1.0
 0.3
 -1.3
 1.3


32 LRS1 Transducin/WD40 repeat-like superfamily protein 819671 At3g05090 4.5 4.7
 1.4
 4.2
 2.4
2.4
 1.5
1.4
 1.5
1.3
 2.5
0.0
 2.3
1.2
 2.4
2.1
 0.8
-0.0
 3.2
2.2
 2.1
0.3
 1.5
0.9
 2.4
0.5
33 AtRZ-1c RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 830307 At5g04280 4.5 5.1
 4.0
 4.0
3.8
 3.3
2.6
 1.1
0.6
 2.2
1.4
 0.9
0.5
 0.6
-0.5
 0.6
 -0.9
 1.7
 2.0
1.3
 1.4
0.9
 1.4
0.4
34 SHM6 serine hydroxymethyltransferase 6 838807 At1g22020 4.5 4.8
 2.2
 4.0
0.4
 4.4
3.7
 4.6
3.9
 5.2
4.6
 3.4
2.1
 3.3
1.9
 4.2
-0.1
 0.7
-0.3
 4.7
-0.1
 3.2
 2.3
 2.0
35 AT5G55600 Agenet and bromo-adjacent homology (BAH) domain-containing protein 835654 At5g55600 4.5 4.2
 3.7
 3.2
 3.0
2.6
 3.7
2.3
 3.8
3.4
 3.2
1.5
 4.4
2.6
 1.8
1.7
 0.2
-0.8
 1.9
1.1
 4.2
-0.3
 3.3
1.3
 2.7
1.2
36 AT1G28760 guanosine-3',5'-bis (diphosphate) 3'-pyrophosphohydrolase, putative (DUF2215) 839772 At1g28760 4.5 5.0
 3.1
 2.9
 4.1
1.6
 2.9
2.0
 3.1
2.0
 0.8
 0.2
 0.2
 -1.0
 0.8
 1.6
 1.2
 2.5
37 UBP16 ubiquitin-specific protease 16 828558 At4g24560 4.5 4.6
 4.5
 6.5
0.7
 4.4
4.3
 3.2
2.6
 3.4
3.2
 2.9
2.4
 2.9
1.0
 4.7
3.9
 1.0
0.7
 4.1
3.4
 2.5
 1.4
 1.4
38 CYCT1;4 Cyclin family protein 827702 At4g19600 4.5 4.8
 2.0
 5.0
4.0
 4.2
2.5
 3.4
3.1
 4.7
3.5
 1.7
0.8
 1.4
0.8
 3.3
1.0
 0.6
-0.6
 4.0
0.9
 4.5
 3.8
 1.5
39 SLP2 Calcineurin-like metallo-phosphoesterase superfamily protein 838428 At1g18480 4.5 4.9
 3.4
 3.2
 1.0
 0.7
 1.3
 -0.0
 -0.4
 2.6
 -0.4
 1.5
 1.6
 0.8
 0.5
40 SGA2 ASF1 like histone chaperone 842992 At1g66740 4.4 4.6
 2.1
 4.9
-0.4
 1.9
-0.1
 1.4
0.8
 1.4
0.9
 2.4
1.5
 1.3
0.5
 -1.1
 -1.9
 -1.0
 2.5
1.0
 1.4
0.6
 1.6
0.6
41 AT4G32620 Enhancer of polycomb-like transcription factor protein 829397 At4g32620 4.4 4.8
 4.8
 5.9
 5.3
5.2
 4.3
4.0
 6.5
5.6
 2.5
2.0
 3.2
2.5
 3.4
 -0.6
 2.8
 2.6
 2.4
 3.1
42 MUG7 MuDR family transposase 3768859 At3g05850 4.4 4.8
 2.4
 7.2
 1.4
0.9
 1.0
0.4
 1.6
1.0
 1.5
1.3
 2.0
1.7
 4.1
1.5
 0.3
-1.2
 3.2
1.4
 4.5
2.0
 3.3
2.7
 3.0
2.2
43 PCFS4 PCF11P-similar protein 4 825827 At4g04885 4.4 4.7
 3.5
 5.3
 2.8
1.6
 1.1
0.6
 1.8
1.6
 3.6
2.6
 3.8
1.5
 4.2
 -0.7
 3.3
 1.4
 1.0
 1.6
44 BSL3 BRI1 suppressor 1 (BSU1)-like 3 817263 At2g27210 4.4 4.7
 5.1
 5.2
5.1
 6.1
5.9
 3.2
2.7
 4.1
3.6
 4.8
2.8
 3.3
0.9
 3.6
2.6
 0.1
-0.1
 4.2
4.0
 2.1
1.5
 2.8
2.3
 1.8
1.4
45 EIL3 ETHYLENE-INSENSITIVE3-like 3 843708 At1g73730 4.4 4.4
 3.2
 4.2
 0.6
-0.1
 1.1
0.5
 0.9
0.6
 2.5
2.2
 2.2
1.5
 3.1
 -0.6
 4.3
 1.8
0.3
 3.3
-0.8
 2.3
-0.0
46 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 821395 At3g18640 4.4 4.6
 2.4
 5.6
 3.8
1.8
 2.0
1.6
 3.2
2.4
 4.7
4.3
 3.3
3.0
 3.2
2.4
 0.7
0.3
 2.7
1.7
 4.0
-0.3
 2.7
-0.9
 2.2
0.3
47 AT1G18900 Pentatricopeptide repeat (PPR) superfamily protein 838471 At1g18900 4.3 4.3
 2.9
 3.5
3.4
 3.8
3.1
 3.2
2.1
 3.1
2.7
 2.2
 2.5
 3.3
 -0.0
 3.6
 2.5
 1.9
 1.6
48 AT2G14850 transcriptional regulator of RNA polII, SAGA, subunit 815974 At2g14850 4.3 4.5
 3.3
 5.1
3.4
 2.9
2.0
 2.7
2.3
 2.8
2.4
 2.6
1.7
 2.5
1.7
 3.8
0.7
 0.3
0.2
 2.3
0.2
 1.3
0.8
 0.6
-0.6
 1.3
0.7
49 AT5G42940 RING/U-box superfamily protein 834306 At5g42940 4.3 4.5
 2.3
 4.7
3.8
 3.3
2.9
 1.3
0.8
 1.9
1.6
 1.6
1.4
 3.0
0.7
 4.1
1.0
 0.6
-0.2
 4.8
0.5
 2.5
1.9
 4.0
2.4
 2.6
1.7
50 SMG7 Telomerase activating protein Est1 832060 At5g19400 4.3 4.5
 5.3
 5.2
 3.5
3.1
 3.7
2.8
 3.8
3.0
 2.7
2.1
 2.4
2.3
 3.8
3.5
 -0.4
-0.8
 4.4
2.4
 3.3
2.6
 4.1
1.7
 4.1
2.4
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