Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   XPB1   DNA repair helicase XPB1-like protein 
 ath-r.6   XPB1   DNA repair helicase XPB1-like protein 
 ath-e.1   XPB1   DNA repair helicase XPB1-like protein 
 ath-u.4   XPB2   homolog of Xeroderma pigmentosum complementation group B 2 
 gma-u.4   100818501   general transcription and DNA repair factor IIH helicase subunit XPB1 
 gma-u.4   100789550   general transcription and DNA repair factor IIH helicase subunit XPB1 
 ppo-u.4   7472752   general transcription and DNA repair factor IIH helicase subunit XPB1 
 mtr-u.4   25502076   general transcription and DNA repair factor IIH helicase subunit XPB1 
 sly-u.4   101251406   general transcription and DNA repair factor IIH helicase subunit XPB1 
 osa-u.4   4325640   general transcription and DNA repair factor IIH helicase subunit XPB1 

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Top 50 coexpressed genes to XPB1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath513   Various types of N-glycan biosynthesis  1 32 -
 ath510   N-Glycan biosynthesis  1 46 -
 ath51   Fructose and mannose metabolism  1 63 -
 ath260   Glycine, serine and threonine metabolism  1 70 -
 ath3040   Spliceosome  2 203 -

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ath:XPB1 (DNA repair helicase XPB1-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
XPB1
ath-r.6
for
XPB1
ath-e.1
for
XPB1
ath-u.4
for
XPB2
gma-u.4
for
100818501
gma-u.4
for
100789550
ppo-u.4
for
7472752
mtr-u.4
for
25502076
sly-u.4
for
101251406
osa-u.4
for
4325640
1 AT3G15220 Protein kinase superfamily protein 820753 At3g15220 8.8 9.8
 2.3
 1.4
-0.3
 0.2
-0.2
 1.8
0.5
 2.5
1.0
 4.2
 4.5
 1.2
2 SUA suppressor of abi3-5 824590 At3g54230 7.8 8.8
 2.8
 1.7
 1.2
0.3
 1.8
0.7
 2.2
2.1
 3.9
 1.9
 3.7
3 AT4G36980 CLK4-associating serine/arginine-rich protein 829852 At4g36980 7.1 7.5
 2.8
 -0.2
 0.3
-0.7
 1.7
1.3
 0.3
-0.7
 1.8
 1.1
 3.5
4 INO80 DNA helicase INO80-like protein 824897 At3g57300 7.0 7.7
 2.8
 1.7
 3.7
3.3
 2.3
2.1
 1.9
1.6
 3.3
 4.0
 2.6
5 AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein 842315 At1g60200 6.8 7.5
 3.9
 1.3
 0.8
-0.8
 2.2
1.3
 0.1
-0.7
 2.1
 1.4
 2.7
6 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519 At2g39340 6.7 7.1
 1.9
 1.8
 2.6
0.9
 3.9
2.5
 0.7
-0.0
 2.1
 3.4
 2.3
2.3
7 AT1G27520 Glycosyl hydrolase family 47 protein 839643 At1g27520 6.5 6.9
 1.2
 -1.9
 -0.1
 -0.2
 1.5
0.1
 2.8
 -0.6
 1.1
8 CLC-D chloride channel D 832693 At5g26240 6.3 7.4
 1.7
 1.2
 1.1
0.3
 3.1
2.7
 2.2
 4.9
 3.0
 2.2
9 AT1G53780 26S proteasome regulatory complex ATPase 841815 At1g53780 6.3 6.7
 3.3
 2.9
-0.7
 3.0
2.1
 4.1
3.6
 2.5
1.4
 3.3
3.1
 2.9
2.7
 2.1
0.6
10 ASG2 transducin family protein / WD-40 repeat family protein 830961 At5g10940 6.1 6.8
 3.3
 2.0
 2.4
1.8
 2.8
1.7
 1.6
 2.9
 3.5
 1.5
11 EDM2 ENHANCED DOWNY MILDEW 2 835632 At5g55390 6.1 7.2
 1.1
 2.8
-0.4
 1.8
1.5
 1.6
1.6
 1.4
 2.5
-0.0
 2.6
0.2
 3.1
2.2
12 AT1G70620 cyclin-like protein 843399 At1g70620 6.0 6.5
 1.8
 -0.1
 -0.1
 -0.3
 0.4
 2.1
 1.5
 2.3
13 REV1 DNA-directed DNA polymerase 834504 At5g44750 5.7 6.1
 1.2
 1.4
 0.6
 1.4
 1.0
 2.2
 1.8
 1.9
14 AT2G37840 Protein kinase superfamily protein 818361 At2g37840 5.6 6.0
 2.2
 2.3
-0.4
 0.6
0.4
 2.7
1.5
 -0.2
-0.2
 2.9
 3.9
2.5
 2.0
15 AT5G15270 RNA-binding KH domain-containing protein 831379 At5g15270 5.5 5.9
 2.3
 -0.0
-0.1
 2.1
1.6
 2.0
2.0
 1.2
1.0
 2.9
2.5
 2.1
1.9
 1.6
16 AME3 Protein kinase superfamily protein 829401 At4g32660 5.5 6.0
 2.8
 0.7
 -0.6
-1.3
 2.7
2.6
 1.2
 0.8
2.2
17 AT1G19485 Transducin/WD40 repeat-like superfamily protein 838534 At1g19485 5.4 5.9
 0.8
 1.4
 1.6
 1.4
 1.7
-0.9
 3.8
 -0.1
 2.0
18 AT1G02960 kinetochore protein 839363 At1g02960 5.3 5.2
 2.5
 0.3
 -0.0
-0.3
 1.3
0.3
 1.5
 1.9
 0.5
 3.0
19 SAC3B SAC3/GANP/Nin1/mts3/eIF-3 p25 family 819803 At3g06290 5.3 5.9
 1.5
 0.9
 2.6
2.6
 4.5
2.0
 1.9
 2.7
 4.1
 1.9
20 AT4G12680 uncharacterized protein 826880 At4g12680 5.3 5.6
 0.7
 0.5
 -0.7
 -0.7
 0.1
1.7
21 AT4G29890 choline monooxygenase, putative (CMO-like) 829111 At4g29890 5.3 5.7
 2.1
 -1.6
 0.2
 0.9
 -0.1
 1.2
 0.5
 0.9
22 AT2G25010 Aminotransferase-like, plant mobile domain family protein 817040 At2g25010 5.3 5.9
 1.9
 2.4
1.9
 0.8
-0.1
 2.8
0.8
 3.0
1.3
 1.1
 2.1
-0.6
 0.6
23 EMB2757 Transducin/WD40 repeat-like superfamily protein 829108 At4g29860 5.2 5.6
 1.0
 0.7
 2.9
 4.2
 1.0
 2.3
 0.2
 0.5
24 AT5G26610 D111/G-patch domain-containing protein 832729 At5g26610 5.2 5.7
 1.3
 1.5
 1.0
0.5
 2.3
1.9
 -0.6
-0.7
 0.5
 0.3
 0.8
25 AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor 842382 At1g60900 5.2 5.6
 3.4
 2.0
1.2
 1.7
0.1
 2.2
0.9
 2.5
1.4
 1.8
0.8
 2.3
2.3
 2.6
1.7
26 AT1G36070 Transducin/WD40 repeat-like superfamily protein 840511 At1g36070 5.2 6.0
 2.2
 3.6
2.0
 3.4
3.0
 4.5
3.7
 2.3
1.3
 2.7
2.2
 2.5
1.5
 3.1
-0.1
27 AT1G10890 arginine/glutamate-rich 1 protein 837632 At1g10890 5.1 5.5
 3.6






28 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 831672 At5g01780 5.1 5.4
 1.6
 1.9
-0.0
 0.0
-0.0
 1.4
1.4
 2.0
-0.1
 0.9
-0.2
0.6
29 AT2G25590 Plant Tudor-like protein 817098 At2g25590 5.1 5.1
 1.2
 1.1
-0.8
 1.4
0.3
 1.8
0.6
 1.8
0.0
 0.7
 1.0
0.8
 0.8
0.7
30 AT5G58510 Rab3 GTPase-activating protein catalytic protein 835964 At5g58510 5.1 5.4
 1.4
 0.9
 1.6
1.1
 3.7
2.3
 1.9
 4.8
 3.0
 1.7
31 NHX5 sodium hydrogen exchanger 5 841878 At1g54370 5.0 5.5
 1.6
 2.4
-1.4
 1.2
0.5
 3.3
2.2
 1.3
 3.8
 2.2
 2.7
32 AT1G48430 Dihydroxyacetone kinase 841264 At1g48430 5.0 5.5
 2.3
 1.9
-1.6
 2.4
1.7
 2.8
2.7
 2.3
-1.2
 2.4
 -0.2
 3.0
33 AT3G13225 WW domain-containing protein 820517 At3g13225 4.9 5.7
 2.1
 1.3
 1.1
0.9
 3.0
2.8
 0.8
 1.6
 2.9
 3.2
34 AT5G28390 RNA-binding (RRM/RBD/RNP motifs) family protein 832924 At5g28390 4.9 5.2
 -0.4
 0.8
0.5
 3.4
2.8
 3.2
2.8
 3.3
2.5
 4.2
1.8
 2.1
-0.5
 2.8
2.5
35 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 821167 At3g02300 4.9 5.7
 4.2
 -0.2
 -0.3
-1.4
 1.3
0.4
 1.6
 0.8
 1.3
 1.2
36 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837604 At1g10610 4.9 5.2
 1.8
 0.5
-0.0


0.5
 2.3
37 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily protein 835932 At5g58200 4.9 5.1
 2.1
 -0.2
 -0.1
 0.6
 -1.5
 1.0
 0.6
 0.4
38 AT3G13340 Transducin/WD40 repeat-like superfamily protein 820534 At3g13340 4.8 5.6
 1.7
 3.6
2.0
 3.4
3.0
 4.5
3.7
 2.3
1.3
 2.7
2.2
 2.5
1.5
 3.1
-0.1
39 AT3G57170 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein 824884 At3g57170 4.8 5.1
 1.5
 -2.0
 0.2
-0.1
 2.1
0.9
 -0.0
 1.6
 0.3
 1.0
40 AT5G55600 Agenet and bromo-adjacent homology (BAH) domain-containing protein 835654 At5g55600 4.8 5.4
 3.0
 2.7
 1.5
0.7
 2.8
2.7
 0.2
0.1
 1.7
1.4
 3.6
1.4
 -0.1
41 GTE8 global transcription factor group E8 822345 At3g27260 4.7 5.1
 1.9
 2.9
1.7
 2.6
1.9
 2.7
1.7
 1.1
0.8
 3.2
0.8
 3.6
1.7
 3.6
0.5
42 EMB2820 Cytidine/deoxycytidylate deaminase family protein 832539 At5g24670 4.7 4.9
 1.0
 0.2
 0.3
 3.2
 -0.1
 2.2
 0.5
 1.4
43 DCL1 dicer-like 1 839574 At1g01040 4.7 5.5
 2.7
 2.0
 1.5
0.4
 1.7
0.6
 -0.3
 4.5
 1.1
 1.3
44 AT3G24740 cellulose synthase, putative (DUF1644) 822072 At3g24740 4.7 5.1
 3.0
 1.0
 1.5
1.4
 2.6
1.8
 3.2
 1.4
 1.8
 1.5
45 AT1G11930 Putative pyridoxal phosphate-dependent enzyme, YBL036C type 837744 At1g11930 4.7 5.5
 2.3
 -0.4
-1.3
 0.7
0.6
 1.5
0.7
 1.4
 0.8
0.2
 -0.4
-0.7
 2.5
46 AT4G08540 DNA-directed RNA polymerase II protein 826413 At4g08540 4.6 4.9
 1.4
 0.9
 2.3
2.2
 3.0
3.0
 0.7
 1.9
 3.2
 0.7
47 AT3G63340 kinase superfamily protein 825509 At3g63340 4.6 5.0
 2.6
 1.1
 1.0
 2.9
 1.4
0.9
 2.0
 3.4
0.6
 1.6
48 CGL1 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 829981 At4g38240 4.6 5.1
 2.8
 0.1
 -0.3
-0.8
 1.6
1.4
 2.1
1.2
 3.0
 0.5
 1.7
49 TRFL6 TRF-like 6 843597 At1g72650 4.6 4.9
 1.5
 0.4
0.0
 1.9
0.4
 2.3
2.2
 0.4
-1.2
 2.4
 3.0
 3.1
50 AT1G50970 Membrane trafficking VPS53 family protein 841519 At1g50970 4.6 4.8
 2.8






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