Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   REV1   DNA-directed DNA polymerase 
 ath-r.6   REV1   DNA-directed DNA polymerase 
 ath-m.9   REV1   DNA-directed DNA polymerase 
 ath-m.4.notissue   REV1   DNA-directed DNA polymerase 
 ath-m.4.tis   REV1   DNA-directed DNA polymerase 
 ath-m.4.str   REV1   DNA-directed DNA polymerase 
 ath-m.4.hor   REV1   DNA-directed DNA polymerase 
 ath-m.4.bio   REV1   DNA-directed DNA polymerase 
 ath-m.4.lig   REV1   DNA-directed DNA polymerase 
 ath-e.1   REV1   DNA-directed DNA polymerase 
 gma-u.4   100778409   DNA repair protein REV1 
 ppo-u.4   7490072   DNA repair protein REV1 
 mtr-u.4   25494478   DNA repair protein REV1 
 sly-u.4   101257318   DNA repair protein REV1 
 osa-u.4   4341904   DNA repair protein REV1 

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Top 50 coexpressed genes to REV1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3040   Spliceosome  4 180 2.96
 ath565   Ether lipid metabolism  1 26 -
 ath3440   Homologous recombination  1 60 -
 ath3050   Proteasome  1 61 -
 ath564   Glycerophospholipid metabolism  1 99 -

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ath:REV1 (DNA-directed DNA polymerase) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
REV1
ath-r.6
for
REV1
ath-m.9
for
REV1
ath-m.4.notissue
for
REV1
ath-m.4.tis
for
REV1
ath-m.4.str
for
REV1
ath-m.4.hor
for
REV1
ath-m.4.bio
for
REV1
ath-m.4.lig
for
REV1
ath-e.1
for
REV1
gma-u.4
for
100778409
ppo-u.4
for
7490072
mtr-u.4
for
25494478
sly-u.4
for
101257318
osa-u.4
for
4341904
1 RIK RS2-interacting KH protein 822600 At3g29390 11.2 11.2
 8.2
 12.0
 4.1
 2.8
 4.7
 2.3
 2.1
 2.5
 4.3
3.5
 2.1
 5.4
 3.6
 1.4
2 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 832631 At5g25560 9.6 8.8
 7.9
 180.7
 2.5
 1.7
 4.3
 1.6
 3.3
 1.3
 2.7
2.2
 2.4
0.9
 2.7
1.9
 2.5
2.1
 0.7
0.0
3 EDM2 ENHANCED DOWNY MILDEW 2 835632 At5g55390 9.3 9.0
 7.0
 9.5
 2.3
 4.2
 2.7
 3.7
 2.7
 2.5
 2.7
1.1
 2.1
 5.4
0.3
 3.8
0.5
 2.0
0.3
4 AT4G36980 CLK4-associating serine/arginine-rich protein 829852 At4g36980 9.2 9.5
 6.5
 19.6
 2.4
 2.4
 4.7
 2.7
 3.0
 0.9
 6.3
4.3
 2.2
1.8
 4.2
 3.7
 1.0
5 EMB2820 Cytidine/deoxycytidylate deaminase family protein 832539 At5g24670 9.1 8.1
 7.6
 4.9
 1.9
 3.7
 5.2
 1.5
 2.0
 1.2
 2.1
 0.8
 2.9
 3.0
 0.1
6 AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor 842382 At1g60900 8.9 9.6






2.0
 2.0
2.0
 1.3
1.2
 3.0
2.5
 3.9
2.9
 1.4
1.0
7 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519 At2g39340 8.9 7.9
 7.4
 4.0
 3.4
 3.5
 2.9
 1.6
 2.7
 1.5
 3.3
2.9
 3.1
2.4
 5.0
 4.0
 2.7
1.7
8 LIG6 DNA LIGASE 6 842991 At1g66730 8.8 9.8
 5.5
 394.2
 3.2
 1.4
 3.1
 0.8
 1.0
 1.7
 3.1
 2.0
 3.9
 4.3
 2.1
9 AT1G19485 Transducin/WD40 repeat-like superfamily protein 838534 At1g19485 8.4 8.3
 6.2
 60.3
 3.8
 2.1
 4.6
 2.3
 3.0
 0.3
 3.0
 1.9
1.8
 3.1
 2.0
 2.6
10 AT1G70620 cyclin-like protein 843399 At1g70620 8.0 8.4
 5.4
 15.0
 1.8
 3.5
 3.5
 1.4
 1.6
 1.4
 3.8
 2.1
 6.2
 4.1
 3.3
11 ATX2 trithorax-like protein 2 837093 At1g05830 7.9 8.2






1.4
 3.5
2.7
 1.9
1.7
 3.3
 2.1
 2.1
12 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor 829822 At4g36690 7.9 8.4
 5.2
 147.2
 4.6
 1.3
 3.2
 0.9
 4.2
 0.7
 2.0
2.0
 1.3
1.2
 3.0
2.5
 3.9
2.9
 1.4
1.0
13 AT1G27520 Glycosyl hydrolase family 47 protein 839643 At1g27520 7.8 7.7
 5.9
 5.0
 2.2
 2.9
 4.2
 3.1
 2.5
 1.2
 3.2
 2.4
1.0
 1.8
 -0.6
 4.2
14 AT5G09880 Splicing factor, CC1-like protein 830848 At5g09880 7.3 6.6
 5.9
 249.7
 2.4
 -0.3
 5.1
 2.0
 2.3
 0.4
 2.4
1.5
 2.4
1.5
 4.5
4.3
 5.7
 1.1
-1.0
15 AT1G50970 Membrane trafficking VPS53 family protein 841519 At1g50970 7.2 7.5
 5.0
 436.1
 1.5
 1.3
 0.4
 1.2
 1.2
 0.6




16 AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein 842315 At1g60200 7.2 7.0
 5.4
 49.5
 1.7
 3.1
 2.2
 1.9
 2.1
 1.7
 5.2
4.1
 1.9
1.4
 4.1
 3.5
 2.2
17 RLP14 receptor like protein 14 843758 At1g74180 7.2 6.8
 5.6
 91.2
 2.8
 2.1
 2.1
 1.6
 1.4
 0.1
 -0.1
 1.0
0.7
 0.6
0.6
 1.8
 0.4
18 SAC3B SAC3/GANP/Nin1/mts3/eIF-3 p25 family 819803 At3g06290 7.1 6.7
 5.6
 93.0
 1.6
 2.7
 2.0
 2.6
 2.0
 -0.1
 2.7
2.5
 3.0
 4.4
 2.7
 2.1
19 AT2G11225 uncharacterized protein 28718249 AT2G11225 7.0 7.4






0.4




20 AT2G25590 Plant Tudor-like protein 817098 At2g25590 7.0 6.6
 5.5
 78.4
 1.3
 2.4
 3.2
 2.8
 2.1
 0.2
 0.8
-0.1
 4.1
1.8
 1.2
 1.4
1.2
 1.9
0.9
21 TRM9 RNA-binding (RRM/RBD/RNP motifs) family protein 840048 At1g31600 6.9 5.9
 6.1
 61.6
 3.0
 2.1
 4.4
 4.0
 4.0
 -1.3
 2.5
 1.8
 1.4
 2.1
 1.8
22 AT1G10890 arginine/glutamate-rich 1 protein 837632 At1g10890 6.8 7.2
20797.7




0.2




23 PLDGAMMA2 phospholipase D gamma 2 826789 At4g11830 6.7 7.4
 4.2
 347.0
 0.8
 2.1
 1.4
 0.0
 1.3
 1.2
 2.1
1.8
 0.4
0.3
 3.8
1.1
 2.2
-1.1
 0.0
24 AT1G30590 RNA polymerase I specific transcription initiation factor RRN3 protein 839939 At1g30590 6.6 6.9






0.6
 0.2
-0.0
 1.2
 0.4
 1.8
 0.1
25 CTC1 conserved telomere maintenance component 1 826554 At4g09680 6.6 6.0
 5.5
 907.0
 3.4
 0.9
 2.1
 2.9
 1.1
 2.1
 2.5
 2.8
 0.5
 3.6
3.4
 0.3
26 AT1G13350 Protein kinase superfamily protein 837895 At1g13350 6.6 7.0






0.7
 5.8
4.9
 2.9
2.5
 5.9
 3.3
 3.3
2.4
27 AT5G03830 CDK inhibitor P21 binding protein 831702 At5g03830 6.5 7.1






0.4
 -0.2
 0.5
 1.3
1.1
 0.1
 0.1
28 AT1G53780 26S proteasome regulatory complex ATPase 841815 At1g53780 6.5 6.8






2.1
 1.0
-0.4
 0.4
-0.9
 0.2
-0.3
 -0.1
-1.0
 0.1
-0.4
29 AT2G16940 Splicing factor, CC1-like protein 816197 At2g16940 6.5 6.8
 4.3
 38.5
 0.7
 2.7
 2.0
 1.3
 3.3
 0.1
 2.4
1.5
 2.4
1.5
 4.5
4.3
 5.7
 1.1
-1.0
30 PTM PHD type transcription factor with transmembrane domain protein (PTM) 833475 At5g35210 6.5 6.9






2.2
 2.2
1.4
 1.5
1.3
 3.4
3.0
 1.6
-0.5
 2.5
31 AT3G25840 Protein kinase superfamily protein 822178 At3g25840 6.4 5.4
 5.7
 94.3
 3.4
 1.9
 2.3
 1.4
 1.6
 1.0
 5.8
4.9
 2.9
2.5
 5.9
 3.3
 3.3
2.4
32 AT3G57470 Insulinase (Peptidase family M16) family protein 824914 At3g57470 6.4 5.2
 5.8
 79.8
 0.4
 4.5
 3.9
 0.7
 2.7
 0.0
 2.4
2.4
 0.8
 2.8
 3.4
0.1
 2.4
2.3
33 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 825272 At3g61010 6.4 6.3
 4.7
 25.9
 0.7
 3.3
 5.1
 2.3
 1.7
 0.8




34 AT1G61970 Mitochondrial transcription termination factor family protein 842492 At1g61970 6.2 6.7






1.4




35 AT5G53010 calcium-transporting ATPase 835380 At5g53010 6.2 6.2






1.0




36 EMB2773 PHD finger family protein 831407 At5g15540 6.2 5.4
 5.3
 126.0
 3.2
 2.3
 2.4
 1.9
 1.4
 2.2
 4.5
4.4
 3.3
 6.2
 4.8
 4.7
37 INO80 DNA helicase INO80-like protein 824897 At3g57300 6.2 6.0
 4.6
 281.6
 2.5
 1.7
 2.3
 2.1
 3.9
 1.8
 2.9
2.0
 1.8
1.7
 5.5
 3.9
 3.6
38 DCL1 dicer-like 1 839574 At1g01040 6.2 6.4
 4.2
 570.5
 1.7
 0.6
 2.9
 1.7
 1.1
 1.6
 2.5
1.9
 2.6
 5.7
 5.4
 3.2
39 SR34b RNA-binding (RRM/RBD/RNP motifs) family protein 828027 At4g02430 6.2 6.2
 4.5
 982.6
 3.4
 0.5
 2.9
 1.2
 0.9
 1.0
 4.0
3.3
 2.1
1.6
 3.1
1.4
 2.0
 2.2
-0.0
40 DCL2 dicer-like 2 821300 At3g03300 6.1 5.7
 4.9
 104.9
 1.4
 1.7
 3.1
 2.5
 0.4
 2.2
 2.6
-0.0
 2.3
0.4
 0.9
0.4
 2.1
0.5
 1.2
1.0
41 AT1G79950 RAD3-like DNA-binding helicase protein 844335 At1g79950 6.0 6.7
 3.8
 1527.7
 2.9
 0.6
 2.2
 1.0
 3.0
 1.6
 0.4
1.6
 1.6
 2.2
42 AT2G39580 zinc finger C3H1 domain protein 818543 At2g39580 6.0 5.8
 4.6
 1094.2
 0.5
 0.6
 3.4
 0.4
 2.3
 1.1
 5.0
 3.7
2.8
 3.8
 5.6
 2.5
43 AT5G24620 Pathogenesis-related thaumatin superfamily protein 832533 At5g24620 6.0 5.0
 5.4
 306.0
 1.1
 1.3
 3.3
 1.5
 1.7
 1.5
-0.7
 -0.2

44 RAD50 DNA repair-recombination protein (RAD50) 817756 At2g31970 6.0 5.3
 5.1
 612.2
 1.9
 1.3
 2.4
 2.3
 0.2
 2.4
 2.8
 1.2
 2.6
 3.4
 1.4
45 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein 842655 At1g63490 6.0 4.6
 5.7
 2832.8
 5.7
 -0.1
 1.8
 1.0
 1.6
 2.8
 3.0
2.7
 2.7
 6.3
 3.1
 3.3
46 AT5G45760 Transducin/WD40 repeat-like superfamily protein 834615 At5g45760 5.9 4.6
 5.7
 37.8
 1.1
 3.1
 2.1
 1.5
 2.8
 0.8
 3.2
1.4
 1.1
 -0.0
 3.3
 1.1
47 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily protein 835932 At5g58200 5.9 6.1
 4.1
 263.2
 1.1
 0.8
 3.2
 2.4
 1.8
 -0.2
 1.2
 -1.6
 0.3
 1.0
 0.8
48 AT3G53640 Protein kinase superfamily protein 824532 At3g53640 5.9 6.2






0.7
 5.8
4.9
 2.9
2.5
 5.9
 3.3
 3.3
2.4
49 AT2G14255 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 2745525 At2g14255 5.8 5.9






1.7
 2.9
2.5
 1.7
 2.5
 0.8
 1.3
50 OTS2 Cysteine proteinases superfamily protein 837598 At1g10570 5.8 5.0
 5.0
 47.6
 0.6
 1.7
 3.3
 1.9
 3.2
 2.0
 4.5
 0.1
 4.1
 1.2
-0.4
 0.7
0.3
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