Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   PS1   Presenilin-1 
 ath-r.6   PS1   Presenilin-1 
 ath-m.9   PS1   Presenilin-1 
 ath-m.4.notissue   PS1   Presenilin-1 
 ath-m.4.tis   PS1   Presenilin-1 
 ath-m.4.str   PS1   Presenilin-1 
 ath-m.4.hor   PS1   Presenilin-1 
 ath-m.4.bio   PS1   Presenilin-1 
 ath-m.4.lig   PS1   Presenilin-1 
 ath-e.1   PS1   Presenilin-1 
 gma-u.4   100819461   presenilin-like protein At1g08700 
 gma-u.4   100799010   presenilin-like protein At1g08700 
 ppo-u.4   7482392   presenilin-like protein At1g08700 
 mtr-u.4   11433216   presenilin-like protein At1g08700 
 sly-u.4   101256336   presenilin-like protein At1g08700 
 osa-u.4   4324260   presenilin-like protein At1g08700 

close


Top 50 coexpressed genes to PS1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath510   N-Glycan biosynthesis  1 46 -
 ath280   Valine, leucine and isoleucine degradation  1 52 -
 ath330   Arginine and proline metabolism  1 54 -
 ath270   Cysteine and methionine metabolism  1 124 -
 ath1230   Biosynthesis of amino acids  2 244 -

close


ath:PS1 (Presenilin-1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
PS1
ath-r.6
for
PS1
ath-m.9
for
PS1
ath-m.4.notissue
for
PS1
ath-m.4.tis
for
PS1
ath-m.4.str
for
PS1
ath-m.4.hor
for
PS1
ath-m.4.bio
for
PS1
ath-m.4.lig
for
PS1
ath-e.1
for
PS1
gma-u.4
for
100819461
gma-u.4
for
100799010
ppo-u.4
for
7482392
mtr-u.4
for
11433216
sly-u.4
for
101256336
osa-u.4
for
4324260
1 MPI7 CAMV movement protein interacting protein 7 839565 At1g04260 6.6 5.7
 5.7
 66.0
 4.9
 0.8
 4.5
 2.8
 2.6
 6.3
 3.3
 3.4
 0.0
 4.2
 2.6
2 AT3G28720 uncharacterized protein 822504 At3g28720 5.8 5.8
 4.3
 3.9
 2.6
 3.0
 2.1
 3.6
 1.2
 5.6
 7.0
6.6
 8.7
8.7
 2.6
1.9
 4.9
 3.4
 2.1
3 AT5G49000 Galactose oxidase/kelch repeat superfamily protein 834959 At5g49000 5.4 5.6
 3.7
 422.1
 3.7
 1.5
 0.5
 1.8
 0.6
 2.4





4 AT3G06570 Galactose oxidase/kelch repeat superfamily protein 819836 At3g06570 5.3 5.6
 3.6
 3014.8
 1.1
 1.3
 0.9
 0.0
 0.7
 3.7





5 AT5G51280 DEAD-box protein abstrakt 835202 At5g51280 5.3 4.0
 5.1
 40.7
 2.9
 1.9
 2.3
 3.2
 2.7
 2.9
 3.5
2.8
 2.1
1.8
 -0.8
 6.7
0.9
 0.5
-0.4
 2.9
-0.5
6 AT4G39240 Galactose oxidase/kelch repeat superfamily protein 830080 At4g39240 5.2 5.3
 3.8
 90.3
 4.0
 3.3
 0.8
 1.9
 1.0
 2.9





7 AT2G01060 myb-like HTH transcriptional regulator family protein 814630 At2g01060 5.1 5.2
 3.6
 39.6
 1.2
 2.2
 2.4
 3.2
 0.8
 3.8
 1.6
0.0
 1.2
0.2
 -1.3
-1.9
 1.1
 0.8
-0.3
 0.2
-0.1
8 FTA farnesyltransferase A 825107 At3g59380 5.1 4.9
 3.8
 203.1
 0.4
 1.9
 1.7
 3.5
 0.8
 2.5
 -0.2
-0.7
 -1.0
-1.1
 2.7
 0.3
 2.7
 1.8
9 AT1G55880 Pyridoxal-5'-phosphate-dependent enzyme family protein 842038 At1g55880 5.0 5.6
 3.0
 3823.6
 -0.0
 0.4
 -0.8
 1.9
 -0.3
 2.1
 0.2
 0.6
 1.0
 2.5
 0.9
 1.1
10 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein 820721 At3g14920 5.0 4.7
 3.9
 23.4
 0.9
 4.0
 3.3
 3.3
 0.2
 3.5
 0.1
-0.7
 1.3
0.4
 3.0
 0.0
-0.5
 0.5
0.1
 1.0
11 AT4G03030 Galactose oxidase/kelch repeat superfamily protein 828110 At4g03030 4.9 4.3
 4.2
 4052.4
 -0.3
 0.3
 0.3
 1.5
 -0.2
 4.4
 2.8
2.4
 2.3
2.1
 1.3
0.3
 1.4
 1.6
 1.7
12 TAF6B TBP-ASSOCIATED FACTOR 6B 841877 At1g54360 4.9 4.4
 4.1
 78.2
 1.3
 2.1
 1.3
 3.5
 0.6
 2.6





13 AT5G58480 O-Glycosyl hydrolases family 17 protein 835961 At5g58480 4.9 3.9
 4.6
 2199.8
 0.5
 1.8
 2.7
 0.5
 1.5
 2.6
 -0.8
-1.7
 -0.4
-1.2
 0.1
 -0.8
0.2
14 AT5G58640 Selenoprotein, Rdx type 835978 At5g58640 4.9 5.6
 2.9
 60.8
 2.3
 2.5
 2.3
 2.4
 0.5
 4.9
 1.0
0.9
 3.2
2.4
 2.4
1.8
 3.1
0.8
 1.5
 2.8
2.1
15 AT2G25520 Drug/metabolite transporter superfamily protein 817090 At2g25520 4.8 4.6
 3.7
 1640.3
 2.5
 0.7
 0.2
 1.9
 0.3
 5.3
 3.5
3.0
 5.4
5.3
 3.6
2.9
 4.9
1.2
 3.3
3.1
 1.2
0.6
16 AT3G08650 ZIP metal ion transporter family 820012 At3g08650 4.8 5.0
 3.2
 1053.7
 -0.1
 0.4
 2.4
 3.2
 0.6
 4.4
 1.4
1.4
 1.4
0.6
 1.0
0.7
 1.7
 1.7
 0.7
17 CYP81K1 cytochrome P450, family 81, subfamily K, polypeptide 1 830926 At5g10610 4.7 5.4






3.0

0.0
-0.5
-0.6
18 CCX4 cation calcium exchanger 4 841851 At1g54115 4.6 4.8
 3.2
 2853.1
 1.2
 1.5
 0.3
 0.4
 2.8
 6.1
 3.2
2.3
 1.8
1.6
 -0.2
-0.3
 3.5
4.7
19 LDL1 LSD1-like 1 842582 At1g62830 4.5 3.0
 4.9
 78.8
 1.5
 1.5
 2.0
 2.1
 0.7
 2.5
 6.1
5.7
 4.9
4.7
 3.6
 3.9
 4.0
 3.4
20 AT5G66240 Transducin/WD40 repeat-like superfamily protein 836756 At5g66240 4.5 4.7
 3.1
 950.6
 1.1
 1.7
 1.0
 2.4
 0.9
 1.5
 0.3
-0.2
 0.1
-0.4
 -0.0
 0.1
 -0.1
 0.7
21 AT2G40650 PRP38 family protein 818660 At2g40650 4.5 4.3
 3.4
 1124.3
 1.8
 0.4
 0.7
 2.2
 0.8
 3.2
 3.7
2.8
 2.9
2.5
 2.0
 2.7
 1.4
 0.2
22 AT5G09310 gamma-secretase subunit 830790 At5g09310 4.4 4.6
 3.0
 196.5
 4.3
 1.7
 1.8
 4.1
 -0.7
 5.0
 2.8
1.9
 3.9
2.6
 1.5
 2.6
 1.0
 2.7
23 SPPL1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 829478 At4g33410 4.4 3.6
 4.0
 1322.1
 0.8
 1.7
 3.1
 0.7
 0.7
 1.6
 0.5
-0.7
 0.8
0.1
 4.1
1.4
 2.4
 2.8
 2.5
24 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein 834199 At5g41940 4.4 5.3
 2.3
 904.1
 0.3
 1.1
 0.8
 2.1
 -0.8
 5.0
 2.5
2.4
 3.2
2.4
 1.3
1.1
 3.5
2.6
 2.8
2.6
 1.4
0.3
25 QQT2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 828268 At4g21800 4.3 4.8
 2.7
 65.2
 0.6
 2.3
 0.7
 3.4
 1.4
 2.1
 1.6
1.5
 0.9
0.6
 -0.3
-0.5
 2.0
 1.5
 0.0
26 AT2G45590 Protein kinase superfamily protein 819167 At2g45590 4.3 4.3
 3.2
 1171.8
 1.0
 1.0
 1.5
 1.7
 0.6
 4.2
 3.1
2.3
 1.8
1.6
 2.1
0.3
 3.6
2.3
 2.6
1.2
 2.1
0.6
27 CIP8 COP1-interacting protein 8 836616 At5g64920 4.3 3.7
 3.7
 2489.1
 -0.1
 2.5
 1.1
 -0.1
 0.3
 3.3
 2.2
2.0
 2.3
2.0
1.7
 4.3
28 AT4G32680 uncharacterized protein 829403 At4g32680 4.3 3.8
 3.7
 512.8
 2.7
 1.1
 0.3
 2.0
 0.2
 4.5
 1.2
0.7
 2.5
1.2
 2.0
0.3
0.7
 -0.5
-0.5
29 LARP6b RNA-binding protein 819002 At2g43970 4.3 4.2
 3.2
 2297.3
 -0.1
 0.9
 1.1
 3.0
 -1.0
 4.4
 3.1
3.0
 3.2
2.6
 2.2
1.3
 2.4
 2.6
0.6
 2.7
1.3
30 AT5G13890 plant viral-response family protein (DUF716) 831236 At5g13890 4.3 4.4
 2.9
 1262.3
 2.2
 0.4
 1.7
 1.5
 0.8
 5.7
 5.2
 7.3
 2.5
 4.2
 3.8
31 TBL35 TRICHOME BIREFRINGENCE-LIKE 35 831716 At5g01620 4.3 3.8
 3.6
 1049.0
 0.7
 1.5
 2.4
 2.1
 0.7
 1.5
 0.4
-0.4
 1.2
1.2
 1.3
 1.3
 0.6
32 AT3G19120 PIF / Ping-Pong family of plant transposase 821446 At3g19120 4.3 4.9
 2.4
 2704.5
 1.6
 1.0
 2.7
 -0.7
 -0.1
 4.0
 5.6
3.5
 8.1
5.3
 2.9
1.8
 5.7
 4.5
33 ATMAK3 Acyl-CoA N-acyltransferases (NAT) superfamily protein 818391 At2g38130 4.2 2.7
 4.6
 26.5
 2.0
 2.3
 3.4
 3.5
 1.7
 1.1
 -1.0
 -0.9
 1.5
0.6
 0.2
 1.6
 0.2
34 LPPbeta Phosphatidic acid phosphatase (PAP2) family protein 828351 At4g22550 4.2 4.8






4.2
 3.7
1.9
 5.8
2.4
 1.8
 2.4
 1.2
 0.8
35 AT1G71180 6-phosphogluconate dehydrogenase family protein 843458 At1g71180 4.2 4.8
 2.4
 3999.7
 -0.1
 0.4
 1.0
 1.4
 -0.2
 2.6
 2.4
 3.9
 2.4
 2.8
 3.9
36 AT5G19130 GPI transamidase component family protein / Gaa1-like family protein 832033 At5g19130 4.2 4.7
 2.5
 1347.1
 2.1
 0.2
 1.7
 2.0
 0.0
 2.3
 0.4
0.2
 0.8
0.3
 2.5
 1.3
 2.4
 1.2
37 AT3G11890 Sterile alpha motif (SAM) domain-containing protein 820362 At3g11890 4.2 4.8






0.9
 0.4
-0.1
 0.4
-0.3
 0.3
 1.4
 -1.4
 0.5
38 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 827337 At4g16430 4.2 3.8
 3.4
 129.4
 2.2
 1.4
 2.5
 2.3
 2.0
 2.7
 2.3
1.2
 1.5
1.3
 0.4
-0.2
 2.2
 1.6
39 AT5G38380 zinc transporter 833821 At5g38380 4.2 2.8
 4.3
 13.1
 3.8
 2.9
 2.1
 3.2
 1.6
 2.3
 1.8
1.1
 1.2
0.5
 1.2
 0.7
 0.3
 -1.1
40 CYB-1 cytochrome B561-1 833853 At5g38630 4.1 3.4
 3.8
 90.9
 0.7
 2.3
 2.7
 2.9
 1.2
 2.9
 0.2
 1.0
 3.6
0.3
 0.7
 1.6
 0.6
41 AT4G29870 Oligosaccharyltransferase complex/magnesium transporter family protein 829109 At4g29870 4.1 4.6
 2.5
 563.3
 1.6
 1.7
 5.1
 1.8
 0.3
 3.8
 3.2
3.2
 6.5
4.2
 4.1
2.3
 2.2
 3.4
 0.5
42 AT3G63270 nuclease 825502 At3g63270 4.1 4.8
 2.3
 1760.7
 2.0
 -0.2
 0.5
 4.0
 -0.9
 2.8
 2.3
0.0
 0.4
-0.0
 1.9
 1.4
 1.5
 0.9
43 AT5G01980 RING/U-box superfamily protein 831911 At5g01980 4.1 4.5
 2.6
 8900.6
 -0.2
 -0.2
 0.7
 0.2
 -0.0
 5.2
 1.1
-0.3
 1.1
-1.1
 0.7
 -0.1
0.4
-0.5
44 AT2G05320 beta-1,2-N-acetylglucosaminyltransferase II 815080 At2g05320 4.1 3.5
 3.6
 355.9
 0.4
 1.4
 2.4
 2.1
 0.9
 2.9

1.9
 3.3
 0.7
 1.1
45 SKIP16 SKP1/ASK-interacting protein 16 837120 At1g06110 4.1 3.6
 3.5
 1941.7
 1.4
 1.3
 0.9
 2.6
 -0.8
 1.6
 0.4
-0.2
 -0.2
-0.2
 0.5
-0.6
 1.7
 0.2
 0.3
46 D6PKL2 D6 protein kinase like 2 834826 At5g47750 4.1 4.5
 2.5
 334.2
 3.3
 1.0
 3.1
 1.8
 1.0
 2.3
 1.7
1.1
 1.1
0.7
 2.7
1.6
 3.4
2.1
 0.7
0.7
 1.0
0.8
47 CYP721A1 cytochrome P450, family 721, subfamily A, polypeptide 1 843850 At1g75130 4.1 4.3
 2.8
 279.3
 -1.6
 0.6
 2.5
 5.4
 -1.7
 4.3
 0.2
 0.1
 -0.0
-0.5
 0.9
-0.0
 0.5
-1.2
 1.4
48 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein 841873 At1g54320 4.1 2.9
 4.1
 346.8
 -0.3
 2.7
 2.8
 2.1
 0.6
 4.2
 1.0
0.5
 1.2
0.4
 1.3
0.7
 0.3
-1.2
 1.7
-1.4
 1.4
-0.1
49 NEF1 no exine formation 1 831180 At5g13390 4.0 3.4
 3.5
 342.4
 5.3
 1.4
 2.1
 1.3
 1.3
 2.7
 3.8
2.5
 6.3
3.4
 1.8
1.7
 3.4
 2.2
 1.2
50 P5CR pyrroline-5- carboxylate (P5C) reductase 831332 At5g14800 4.0 3.3
 3.7
 1294.4
 -0.1
 1.6
 1.6
 2.4
 0.1
 0.2
 0.3
0.2
 1.7
-0.3
 0.0
 0.7
 0.7
 1.0
The preparation time of this page was 1.6 [sec].