Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   TOM2B   tobamovirus multiplication 2B 
 ath-r.6   TOM2B   tobamovirus multiplication 2B 
 ath-m.9   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.notissue   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.tis   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.str   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.hor   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.bio   TOM2B   tobamovirus multiplication 2B 
 ath-m.4.lig   TOM2B   tobamovirus multiplication 2B 
 ath-e.1   TOM2B   tobamovirus multiplication 2B 
 gma-u.4   100813690   tobamovirus multiplication protein 2B 
 gma-u.4   100819701   tobamovirus multiplication protein 2B 
 ppo-u.4   18094198   tobamovirus multiplication protein 2B 
 mtr-u.4   11405253   tobamovirus multiplication protein 2B 
 sly-u.4   101245663   tobamovirus multiplication protein 2B 
 osa-u.4   4329014   tobamovirus multiplication protein 2B 

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Top 50 coexpressed genes to TOM2B (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3040   Spliceosome  4 180 2.96
 ath4120   Ubiquitin mediated proteolysis  3 119 2.47
 ath4130   SNARE interactions in vesicular transport  2 34 2.48
 ath3018   RNA degradation  1 113 -
 ath4141   Protein processing in endoplasmic reticulum  2 215 -

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ath:TOM2B (tobamovirus multiplication 2B) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
TOM2B
ath-r.6
for
TOM2B
ath-m.9
for
TOM2B
ath-m.4.notissue
for
TOM2B
ath-m.4.tis
for
TOM2B
ath-m.4.str
for
TOM2B
ath-m.4.hor
for
TOM2B
ath-m.4.bio
for
TOM2B
ath-m.4.lig
for
TOM2B
ath-e.1
for
TOM2B
gma-u.4
for
100813690
gma-u.4
for
100819701
ppo-u.4
for
18094198
mtr-u.4
for
11405253
sly-u.4
for
101245663
osa-u.4
for
4329014
1 SKIP5 SKP1/ASK-interacting protein 5 824613 At3g54480 7.7 8.7
 4.5
 123.0
 1.0
 3.3
 1.9
 1.5
 0.6
 2.2
 1.8
 0.1
 1.0
-0.0
 2.0
 1.3
 3.6
2 AT3G21215 RNA-binding (RRM/RBD/RNP motifs) family protein 821675 At3g21215 7.0 7.8






2.5
 2.6
1.5
 5.1
3.6
 1.0
-0.4
 1.3
 0.9
 1.2
3 AT5G27860 uncharacterized protein 832849 At5g27860 6.3 7.0






0.5
 1.9
1.0
 3.0
0.9
 0.9
 1.5
 3.5
 0.5
4 AT1G49590 C2H2 and C2HC zinc fingers superfamily protein 841383 At1g49590 6.0 5.7
 4.7
 336.5
 0.7
 1.1
 1.6
 2.3
 0.8
 0.8
 2.0
1.6
 3.8
3.6
 0.5
 2.6
 1.2
 1.4
5 AT3G23255 tRNA dimethylallyltransferase 5008023 At3g23255 5.6 5.8






1.9
 1.8
 2.0
 1.1
 -0.0
 1.5
6 AT4G36980 CLK4-associating serine/arginine-rich protein 829852 At4g36980 5.6 6.1
 3.5
 1105.5
 3.0
 1.6
 0.6
 1.2
 0.0
 1.7
 0.6
0.5
 2.4
2.0
 0.9
0.6
 0.6
 1.1
 0.4
7 AT1G26580 ELM2 domain protein 839198 At1g26580 5.5 6.4
 3.1
 723.7
 2.1
 1.2
 0.8
 1.4
 0.7
 1.1
 0.7
0.5
 1.1
-0.1
 0.0
-0.1
 0.8
 -0.7
-1.3
 -1.2
8 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 819606 At3g04500 5.5 6.3
 3.1
 3237.0
 1.2
 0.3
 2.1
 0.8
 0.3
 1.1
 1.1
1.1
 2.0
1.7
 2.2
1.4
 0.4
 2.0
1.3
 -0.1
-0.7
9 SR34b RNA-binding (RRM/RBD/RNP motifs) family protein 828027 At4g02430 5.4 5.8
 3.6
 319.3
 3.4
 1.4
 0.8
 1.8
 0.3
 0.9
 3.1
2.9
 2.9
2.6
 1.8
1.2
 0.8
0.0
 0.2
 0.6
0.1
10 AT1G10890 arginine/glutamate-rich 1 protein 837632 At1g10890 5.4 6.1
20514.4




1.0





11 AT4G23330 uncharacterized protein 828432 At4g23330 5.4 5.2
 4.2
 911.9
 1.7
 1.2
 0.9
 2.2
 -0.1
 1.7
 1.8
 1.0
 0.1
-0.0
 2.1
 2.2
 1.8
12 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 844417 At1g80780 5.3 6.1
 3.1
 42.9
 0.0
 3.9
 1.4
 0.9
 0.1
 2.6
 2.0
1.4
 2.7
1.9
 -0.4
-1.1
 0.5
0.3
 0.9
0.5
 1.3
0.2
13 AT5G03500 Mediator complex, subunit Med7 831822 At5g03500 5.3 5.6






3.3
 2.3
1.9
 2.1
1.8
 -0.3
 1.9
1.1
 3.2
 1.1
14 AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein 829732 At4g35785 5.3 5.7






1.8
 3.1
2.8
 4.7
4.0
 0.8
0.3
 0.6
0.3
 2.3
1.3
 0.7
0.4
15 BPM6 BTB-POZ and MATH domain 6 823478 At3g43700 5.2 4.8
 4.2
 17.4
 1.1
 1.8
 1.1
 4.7
 1.3
 1.5
 2.4
2.2
 1.5
1.3
 -0.6
-1.7
 1.2
0.7
 1.6
-0.0
 -0.1
-0.5
16 RSZ21 RS-containing zinc finger protein 21 838997 At1g23860 5.2 6.4
 2.6
 368.7
 0.3
 2.2
 1.5
 0.9
 0.4
 1.8
 3.2
3.0
 2.3
2.2
 -0.5
-0.9
 2.0
0.3
 1.2
 4.9
0.3
17 TBP2 TATA binding protein 2 841999 At1g55520 5.2 4.9
 4.0
 111.4
 1.2
 2.1
 1.3
 2.4
 1.9
 1.9
 2.4
2.0
 2.3
2.2
 -0.1
-0.3
 1.6
0.7
 1.5
 1.7
1.6
18 AT5G04090 histidine-tRNA ligase 830288 At5g04090 5.2 5.6






1.9
 2.4
1.8
 2.2
0.7
 0.7
-0.7
 2.2
 2.4
1.3
 0.4
19 AT5G37930 Protein with RING/U-box and TRAF-like domain 833772 At5g37930 5.2 6.3
 2.7
 345.1
 2.0
 3.2
 1.3
 1.1
 1.7
 2.0
 1.2
0.6
 1.0
0.4
 2.0
-0.2
 2.6
0.7
 0.2
-0.1
 1.4
20 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein 820326 At3g11530 5.2 4.1
 4.8
 444.4
 0.6
 2.0
 1.3
 2.4
 2.7
 1.0
 3.7
2.6
 3.0
2.9
 1.2
 2.2
 3.4
 0.6
21 AT3G59470 Far-red impaired responsive (FAR1) family protein 825116 At3g59470 5.1 5.5
 3.3
 327.2
 1.6
 2.0
 0.7
 1.3
 1.4
 -0.1
 3.1
2.7
 3.6
2.8
 1.3
1.2
 1.6
1.4
 1.2
0.4
 0.6
22 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519 At2g39340 5.1 4.5
 4.3
 25.8
 1.2
 1.6
 2.8
 2.3
 0.6
 2.3
 0.9
0.6
 -0.2
-0.8
 0.9
0.4
 -0.8
 0.4
 -0.5
-1.6
23 AT2G35360 ubiquitin family protein 818103 At2g35360 5.1 5.3
 3.6
 198.8
 4.2
 2.8
 1.5
 1.5
 0.1
 2.4
 3.9
3.2
 2.9
2.8
 2.2
 2.7
 2.5
 0.4
24 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 832631 At5g25560 5.1 5.5
 3.3
 443.6
 2.5
 1.5
 2.1
 1.5
 0.8
 2.5
 1.2
1.0
 2.8
0.6
 0.0
-0.9
 1.0
1.0
 0.4
-1.5
 1.2
0.7
25 SEF HIT-type Zinc finger family protein 833676 At5g37055 5.0 5.0
 3.6
 362.4
 0.5
 2.1
 0.9
 0.8
 -0.0
 1.6
 2.6
2.2
 4.6
3.3
 2.0
 0.3
 1.7
 1.9
26 AT3G24740 cellulose synthase, putative (DUF1644) 822072 At3g24740 4.9 4.2
 4.3
 2978.3
 0.6
 0.8
 0.4
 1.3
 1.0
 0.4
 1.6
1.3
 1.5
1.2
 -0.6
 0.7
 0.2
 -0.2
27 SYP41 syntaxin of plants 41 832756 At5g26980 4.9 6.1
 2.4
 1174.0
 1.5
 1.4
 0.1
 1.6
 1.0
 -0.0
 2.0
1.8
 2.9
2.8
 -0.3
-1.0
 0.1
0.1
 1.5
1.2
 1.0
28 AT1G08710 F-box family protein 837392 At1g08710 4.9 5.1
 3.4
 1128.5
 1.7
 1.1
 1.4
 1.0
 0.9
 0.6
 3.5
 3.4
 0.8
 1.7
 0.5
 2.2
29 AT2G24592 28718300 At2g24592 4.9 5.6






1.5





30 AT2G41600 Mitochondrial glycoprotein family protein 818758 At2g41600 4.8 4.8
 3.6
 1240.1
 0.9
 3.2
 0.6
 0.5
 -0.3
 0.6
 1.4
0.8
 1.3
1.1
 -0.5
 2.0
0.3
-0.0
31 AT5G63460 SAP domain-containing protein 836465 At5g63460 4.8 4.8






2.8
 2.7
2.0
 5.8
3.4
 1.5
0.2
 1.2
 0.4
 1.7
0.2
32 AT5G15270 RNA-binding KH domain-containing protein 831379 At5g15270 4.8 5.2






1.9
 0.6
0.4
 0.4
-0.4
 0.2
-0.2
 0.4
-0.3
 0.6
-0.6
 0.3
33 AT4G14600 Target SNARE coiled-coil domain protein 827108 At4g14600 4.8 5.0
 3.3
 64.7
 0.5
 3.0
 1.9
 0.9
 -0.4
 2.3
 1.3
0.2
 2.1
1.0
 -0.2
 2.1
1.2
 1.0
0.8
 1.7
0.3
34 AT1G27520 Glycosyl hydrolase family 47 protein 839643 At1g27520 4.8 4.6
 3.7
 104.8
 2.7
 3.3
 3.5
 0.2
 0.6
 1.4
 1.0
 2.1
 0.5
-1.7
 0.4
 0.4
 0.8
35 RS31 RNA-binding (RRM/RBD/RNP motifs) family protein 825359 At3g61860 4.8 6.3
 1.9
 1719.2
 0.7
 3.3
 1.8
 -0.5
 -0.1
 2.7
 3.0
2.5
 1.5
1.3
 1.2
1.2
 0.3
0.2
 1.6
1.4
 2.3
1.6
36 AT3G62190 Chaperone DnaJ-domain superfamily protein 825392 At3g62190 4.7 4.7
 3.5
 709.4
 0.4
 1.4
 1.8
 2.0
 0.0
 0.8
 2.1
 4.2
2.2
 1.5
 0.2
37 AT3G11745 uncharacterized protein 820347 At3g11745 4.7 2.7
 5.5
 1201.0
 2.3
 3.3
 -0.7
 -0.3
 0.8
 1.3





38 AT1G02960 kinetochore protein 839363 At1g02960 4.7 4.7
 3.5
 196.8
 1.6
 2.4
 2.5
 0.5
 -0.0
 3.1
 1.3
-0.8
 1.7
1.4
 -0.5
 -0.2
 0.4
 1.6
39 RIK RS2-interacting KH protein 822600 At3g29390 4.7 5.2
 2.9
 294.7
 1.6
 3.0
 1.6
 0.9
 -0.2
 1.5
 0.2
-0.4
 1.2
0.0
 0.3
 0.3
 -0.1
 0.5
40 ING1 RING/FYVE/PHD zinc finger superfamily protein 821986 At3g24010 4.7 4.3
 3.8
 436.0
 3.7
 2.6
 1.0
 0.8
 -0.6
 -0.3
 2.4
1.7
 2.2
1.2
 0.3
 1.7
 2.3
 1.3
41 AT5G05310 TLC ATP/ADP transporter 830413 At5g05310 4.6 5.5
 2.5
 4340.9
 1.3
 -0.2
 0.7
 0.8
 0.3
 3.7
 -1.6
 -0.4
 1.9
 0.8
 0.5
 -0.2
-0.3
42 SUF4 zinc finger (C2H2 type) family protein 839984 At1g30970 4.6 5.9
 2.1
 3458.1
 1.5
 0.9
 -0.2
 0.2
 0.3
 2.0
 2.0
0.8
 3.4
2.4
 1.4
0.5
 0.8
 1.0
1.0
 -0.1
43 AT3G42150 uncharacterized protein 823187 At3g42150 4.6 4.5






1.4
 2.7
1.7
 3.7
2.3
 1.3
 0.4
 2.0
 2.6
44 UBC34 ubiquitin-conjugating enzyme 34 838300 At1g17280 4.6 4.9






1.4
 3.3
2.7
 3.5
3.5
 0.9
 2.7
 2.6
-0.4
 3.6
45 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein 818834 At2g42330 4.6 4.6
 3.3
 845.0
 1.6
 0.6
 1.0
 3.6
 0.7
 2.8
 -1.2
-1.2
 -0.7
-2.1
 0.0
-0.9
 0.1
 -1.9
 -0.4
46 AT5G66290 uncharacterized protein 836761 At5g66290 4.6 4.0
 3.9
 4237.1
 0.6
 1.0
 0.1
 1.2
 0.7
 3.8
 1.8
1.2
 3.3
2.8
 1.5
1.0
 3.1
 2.1
 2.3
47 EMB2820 Cytidine/deoxycytidylate deaminase family protein 832539 At5g24670 4.6 5.7
 2.2
 1366.1
 2.1
 2.1
 1.8
 -0.4
 0.8
 1.9
 1.4
 1.2
 -0.7
 2.4
 -0.3
 0.7
48 FCA flowering time control protein FCA 827323 At4g16280 4.6 4.6
 3.3
 7519.0
 0.5
 -0.6
 2.1
 0.4
 0.9
 2.3
 1.3
1.0
 0.8
0.1
 2.0
 1.3
 0.6
 0.4
49 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 821167 At3g02300 4.6 5.9
 2.1
 142.2
 2.4
 2.4
 1.8
 1.3
 0.3
 1.7
 0.2
-0.1
 0.3
-1.3
 -2.1
 1.0
 0.5
 -0.9
50 AT2G26030 F-box/RNI-like/FBD-like domains-containing protein 817144 At2g26030 4.6 5.0






0.9





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