Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT1G48860   RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta 
 ath-r.6   AT1G48860   RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta 
 ath-e.1   AT1G48860   RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta 
 ath-u.4   AT2G45300   RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta 
 gma-u.4   100789268   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 gma-u.4   100811089   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 ppo-u.4   18105206   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 ppo-u.4   7453965   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 mtr-u.4   11419944   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 sly-u.4   101265440   3-phosphoshikimate 1-carboxyvinyltransferase 2 
 sly-u.4   543977   5-enolpyruvylshikimate-3-phosphate synthase 
 osa-u.4   4340026   3-phosphoshikimate 1-carboxyvinyltransferase 2 

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Top 50 coexpressed genes to AT1G48860 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath1230   Biosynthesis of amino acids  13 230 13.91
 ath940   Phenylpropanoid biosynthesis  10 112 12.72
 ath1200   Carbon metabolism  8 258 6.60
 ath400   Phenylalanine, tyrosine and tryptophan biosynthesis  7 52 10.28
 ath270   Cysteine and methionine metabolism  6 113 6.41

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ath:AT1G48860 (RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT1G48860
ath-r.6
for
AT1G48860
ath-e.1
for
AT1G48860
ath-u.4
for
AT2G45300
gma-u.4
for
100789268
gma-u.4
for
100811089
ppo-u.4
for
18105206
ppo-u.4
for
7453965
mtr-u.4
for
11419944
sly-u.4
for
101265440
sly-u.4
for
543977
osa-u.4
for
4340026
1 AT2G45300 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta 819138 At2g45300 9.4 10.2
 5.8
 9.4
 17.6
 17.6
 3.6
 3.6
0.9
 0.9
2 AT5G66120 3-dehydroquinate synthase 836744 At5g66120 8.9 9.8
 2.8
 8.5
 7.3
5.0
 8.7
8.0
 2.1
 5.2
 9.0
 1.4
 9.5
 5.8
3 EMB1144 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase 841307 At1g48850 8.6 9.1
 5.8
 14.4
 5.6
3.6
 8.5
3.9
 2.8
1.7
 12.3
8.1
 6.9
 1.3
-2.1
 9.9
0.7
 8.9
4 MEE32 dehydroquinate dehydratase, putative / shikimate dehydrogenase 819809 At3g06350 7.2 7.7
 3.4
 11.0
 3.3
 5.7
 1.9
1.6
 12.3
7.6
 3.5
 3.5
 7.1
 6.5
3.9
5 CUE1 Glucose-6-phosphate/phosphate translocator-like protein 833308 At5g33320 6.3 6.8
 4.0
 4.9
0.5
 2.5
1.3
 4.4
2.6
 1.0
0.3
 6.6
2.2
 5.0
0.2
 1.7
0.3
 4.5
0.1
 2.8
2.0
6 AT1G22410 Class-II DAHP synthetase family protein 838847 At1g22410 6.3 6.5
 1.0
 12.5
7.3
 7.1
0.7
 9.5
1.1
 2.1
1.8
 9.2
7.7
 10.3
1.4
 2.2
-0.1
 9.0
0.4
 9.1
7.3
7 CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3 818686 At2g40890 6.2 6.4
 2.7
 9.5
 2.3
1.9
 3.7
3.3
 2.4
0.3
 4.9
1.1
 5.2
 1.5
0.7
 5.5
4.7
 5.1
8 RAD52-2 cobalt ion-binding protein 834838 At5g47870 6.1 6.8
 2.1
 6.8
 3.2
 4.7
 2.6
1.0
 5.6
3.6
 3.9
 -1.0
-1.6
 4.0
3.7
 3.6
0.7
9 AT1G12000 Phosphofructokinase family protein 837752 At1g12000 6.1 6.1
 3.4
 5.4
0.2
 1.7
1.6
 2.8
2.6
 -0.1
 0.2
 2.1
1.6
 0.1
-0.1
 3.6
2.2
 2.1
10 MDH malate dehydrogenase 823906 At3g47520 6.0 6.8
 3.5
 4.4
 2.0
1.7
 3.1
2.0
 -0.3
-0.4
 3.5
1.4
 1.9
 1.4
0.4
 5.4
2.7
 1.4
1.1
11 ATMS1 Cobalamin-independent synthase family protein 831660 At5g17920 6.0 6.4
 3.2
 5.9
5.6
 3.5
2.8
 6.1
4.3
 3.7
3.3
 8.7
7.5
 7.9
1.4
 2.7
0.5
 3.6
3.3
 6.6
5.3
12 MAT3 methionine adenosyltransferase 3 818260 At2g36880 5.8 6.3
 2.8
 11.3
6.6
 4.6
3.1
 4.9
3.5
 3.1
3.0
 7.9
7.8
 5.1
4.8
 2.1
1.7
 3.9
2.0
 5.9
4.9
13 SAM1 S-adenosylmethionine synthetase 1 839501 At1g02500 5.8 6.0
 3.2
 11.3
6.6
 4.6
3.1
 4.9
3.5
 3.1
3.0
 7.9
7.8
 5.1
4.8
 2.1
1.7
 3.9
2.0
 5.9
4.9
14 AT3G02360 6-phosphogluconate dehydrogenase family protein 821163 At3g02360 5.8 6.0
 4.2
 7.0
3.8
 7.2
6.3
 9.3
6.5
 2.2
1.6
 5.4
4.9
 7.2
1.0
 1.1
0.4
 5.6
4.8
 5.3
1.1
15 HCT hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 834951 At5g48930 5.7 6.3
 4.9
 10.2
 2.6
1.6
 3.4
3.1
 2.6
1.2
 5.0
2.3
 3.8
0.1
 1.8
 3.2
 4.7
3.5
16 KASI 3-ketoacyl-acyl carrier protein synthase I 834671 At5g46290 5.7 5.8
 2.9
 3.6
 1.1
1.0
 1.5
1.5
 0.8
0.4
 3.7
2.9
 1.5
1.4
 3.5
1.7
 2.4
0.9
 0.7
0.2
17 AAT aspartate aminotransferase 816758 At2g22250 5.7 6.0
 4.5
 10.4
 7.6
3.4
 8.0
2.8
 2.7
0.9
 12.2
4.3
 8.4
2.8
 0.9
 8.9
 7.8
18 CBR NADH:cytochrome B5 reductase 1 831645 At5g17770 5.7 6.0
 2.9
 6.9
 6.8
3.5
 9.3
3.0
 3.3
0.4
 12.1
2.8
 7.1
2.5
 1.1
 8.9
 4.0
-1.1
19 MTHFR2 methylenetetrahydrofolate reductase 2 819022 At2g44160 5.4 5.9
 1.8
 6.2
5.6
 5.9
5.8
 8.0
6.1
 3.4
1.1
 8.7
2.8
 6.8
 2.5
1.6
 4.6
2.9
 6.7
20 ADK2 adenosine kinase 2 831882 At5g03300 5.4 5.8
 2.1
 5.0
3.0
 3.8
3.0
 4.2
2.3
 3.0
2.5
 9.7
7.2
 4.6
1.7
 2.3
0.4
 3.2
0.7
 6.4
0.8
21 PP2AA3 protein phosphatase 2A subunit A3 837892 At1g13320 5.3 5.5
 1.1
 2.7
2.0
 1.7
1.6
 2.4
2.1
 1.5
0.4
 2.7
0.5
 4.1
2.1
 0.4
0.0
 2.1
0.7
 -0.1
22 CM1 chorismate mutase 1 822573 At3g29200 5.3 5.7
 2.6
 6.4
-1.3
 5.1
3.9
 6.2
5.2
 2.8
 8.2
 6.2
-0.1
 0.4
 7.9
 5.1
23 SHM4 serine hydroxymethyltransferase 4 827027 At4g13930 5.3 5.7
 2.4
 7.1
1.2
 4.7
4.0
 5.8
4.8
 3.4
2.4
 6.4
6.0
 9.0
4.9
 3.3
2.2
 1.6
1.4
 5.8
0.4
24 C4H cinnamate-4-hydroxylase 817599 At2g30490 5.3 5.5
 1.7
 10.4
 5.5
5.5
 7.5
6.1
 3.5
2.9
 6.5
3.9
 5.6
 0.9
 6.2
 6.0
0.6
25 AT5G24760 GroES-like zinc-binding dehydrogenase family protein 832545 At5g24760 5.2 5.8
 0.5
 9.0
 6.1
 5.6
 3.3
 9.2
 10.8
 2.1
 5.9
 6.4
26 PAL1 PHE ammonia lyase 1 818280 At2g37040 5.1 5.6
 1.9
 11.3
9.8

3.9
3.5
 7.7
6.0
 6.5
4.0
 2.3
2.1
 6.6
5.0
 5.8
5.2
27 MS2 methionine synthase 2 821147 At3g03780 5.1 5.5
 1.8
 5.9
5.6
 3.5
2.8
 6.1
4.3
 3.7
3.3
 8.7
7.5
 7.9
1.4
 2.7
0.5
 3.6
3.3
 6.6
5.3
28 AT1G76550 Phosphofructokinase family protein 843988 At1g76550 5.1 5.2
 1.1
 4.6
3.7
 1.4
1.2
 3.4
3.1
 2.9
0.8
 6.6
0.4
 1.5
 0.1
-0.2
 1.5
1.2
 1.8
1.6
29 SHS1 Mitochondrial substrate carrier family protein 829375 At4g32400 5.0 5.5
 1.8
 5.7
 2.2
1.9
 1.3
1.2
 2.0
0.1
 4.6
1.0
 2.1
-0.2
 0.1
 0.8
 1.7
1.0
30 GSA1 glutamate-1-semialdehyde-2,1-aminomutase 836476 At5g63570 5.0 4.9
 5.0
 4.5
1.5
 1.6
0.6
 2.2
1.2
 -1.6
 0.8
 0.9
 3.3
 3.8
 3.1
31 MTHFR1 methylenetetrahydrofolate reductase 1 825167 At3g59970 5.0 5.4
 2.8
 6.2
5.6
 5.9
5.8
 8.0
6.1
 3.4
1.1
 8.7
2.8
 6.8
 2.5
1.6
 4.6
2.9
 6.7
32 LTA2 2-oxoacid dehydrogenases acyltransferase family protein 822181 At3g25860 5.0 5.1
 4.7
 2.3
 1.2
1.0
 1.5
0.7
 0.4
0.1
 1.7
-1.5
 1.6
 3.5
 4.0
 1.1
-0.0
33 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 829551 At4g34050 5.0 5.5
 1.9
 9.4
 3.1
2.5
 4.7
3.5
 2.2
1.7
 4.5
3.7
 7.8
1.8
 1.2
0.8
 2.0
1.9
 4.3
34 HOG1 S-adenosyl-L-homocysteine hydrolase 827028 At4g13940 4.9 5.2
 2.2
 6.0
3.8
 3.8
3.0
 6.7
3.3
 3.0
3.0
 9.2
8.2
 7.5
4.4
 2.0
1.2
 3.9
2.9
 7.2
35 AT1G06550 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 837166 At1g06550 4.9 5.3
 1.6
 7.4
 5.2
4.5
 6.1
3.0
 1.1
 4.7
 3.9
 2.3
 6.5
 5.3
36 4CL1 4-coumarate:CoA ligase 1 841593 At1g51680 4.8 5.3
 2.5
 11.0
7.7
 6.3
5.2
 7.0
7.0
 2.9
1.8
 4.1
3.1
 6.4
5.1
 1.5
1.2
 5.8
4.2
 6.5
4.4
37 EMB3147 EMBRYO DEFECTIVE 3147 817570 At2g30200 4.8 5.0
 1.5
 3.0
 1.8
-0.0
 1.5
0.5
 -0.1
 2.7
 1.0
 3.0
 0.7
 0.4
38 CARA carbamoyl phosphate synthetase A 822396 At3g27740 4.8 4.8
 4.4
 2.8
 -0.1
-0.2
 1.3
0.8
 -0.1
-0.5
 0.9
-0.1
 2.8
0.5
 -0.2
 2.5
 0.5
39 ACLB-1 ATP-citrate lyase B-1 819845 At3g06650 4.7 4.9
 0.5
 2.8
2.8
 7.3
6.8
 11.7
6.7
 2.9
1.8
 8.1
2.4
 6.9
 2.1
1.8
 4.4
3.8
 3.1
40 LysoPL2 lysophospholipase 2 841709 At1g52760 4.7 4.8
 1.1
 8.5
 4.2
 6.0
 2.6
2.4
 9.7
4.6
 7.6
 0.3
 6.6
 -0.4
41 TOC75-III translocon at the outer envelope membrane of chloroplasts 75-III 823827 At3g46740 4.6 4.8
 2.8
 1.6
 0.8
0.8
 2.1
1.5
 -1.0
-1.4
 1.7
0.2
 1.7
1.0
 0.3
 2.2
 -0.1
-0.6
42 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 842058 At1g56070 4.6 4.9
 3.2
 2.8
0.8
 1.0
0.5
 2.3
2.1
 -0.7
-1.1
 1.8
1.7
 1.9
1.2
 0.2
 3.0
 1.8
1.5
43 TRA2 Aldolase-type TIM barrel family protein 831183 At5g13420 4.6 4.9
 3.9
 6.7
 2.2
2.0
 5.5
3.9
 2.3
1.8
 5.2
2.7
 7.0
0.2
 0.3
 5.6
 5.8
44 AT1G29880 glycyl-tRNA synthetase / glycine-tRNA ligase 839866 At1g29880 4.5 4.9
 4.5
 2.5
 0.3
 0.7
 0.4
-0.5
 1.5
-0.4
 0.8
0.5
 0.2
-0.5
 2.5
0.1
 -0.1
-0.6
45 ATCAD4 GroES-like zinc-binding alcohol dehydrogenase family protein 821479 At3g19450 4.5 4.5
 3.3
 5.5
5.2
 1.6
0.7
 2.1
1.5
 1.5
 2.1
 2.9
 2.2
 0.1
 5.7
46 OMT1 O-methyltransferase 1 835504 At5g54160 4.5 5.1
 1.7
 8.6
 2.3
1.6
 4.7
2.6
 2.4
1.1
 4.3
1.5
 4.1
2.1
 1.2
 0.8
 4.1
47 ACLB-2 ATP citrate lyase subunit B 2 835006 At5g49460 4.5 4.5
 1.3
 2.8
2.8
 7.3
6.8
 11.7
6.7
 2.9
1.8
 8.1
2.4
 6.9
 2.1
1.8
 4.4
3.8
 3.1
48 PAL2 phenylalanine ammonia-lyase 2 824493 At3g53260 4.4 4.7
 1.8
 11.3
9.8

3.9
3.5
 7.7
6.0
 6.5
4.0
 2.3
2.1
 6.6
5.0
 5.8
5.2
49 AT5G08690 ATP synthase alpha/beta family protein 830770 At5g08690 4.4 4.7
 3.3
 3.5
3.3
 2.6
1.6
 2.7
2.5
 -0.5
-0.5
 4.2
3.7
 3.9
1.0
 0.8
0.7
 4.0
3.9
 2.2
1.4
50 EMB1467 NADH-ubiquinone dehydrogenase 833729 At5g37510 4.4 4.8
 3.1
 3.1
 3.5
1.7
 3.1
2.7
 1.4
0.4
 2.4
2.0
 2.4
 -0.0
 2.8
 1.5
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