Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT1G67680   SRP72 RNA-binding domain-containing protein 
 ath-r.6   AT1G67680   SRP72 RNA-binding domain-containing protein 
 ath-e.1   AT1G67680   SRP72 RNA-binding domain-containing protein 
 ath-u.4   AT1G67650   SRP72 RNA-binding domain-containing protein 
 gma-u.4   100810125   signal recognition particle subunit SRP72 
 gma-u.4   100791472   signal recognition particle subunit SRP72 
 ppo-u.4   7491965   signal recognition particle subunit SRP72 
 mtr-u.4   25501703   signal recognition particle subunit SRP72 
 sly-u.4   101255954   signal recognition particle subunit SRP72 
 osa-u.4   4324904   signal recognition particle subunit SRP72 

close


Top 50 coexpressed genes to AT1G67680 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3060   Protein export  3 50 3.56
 ath4144   Endocytosis  3 146 2.22
 ath190   Oxidative phosphorylation  2 170 -
 ath3040   Spliceosome  3 203 -
 ath1240   Biosynthesis of cofactors  2 236 -

close


ath:AT1G67680 (SRP72 RNA-binding domain-containing protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT1G67680
ath-r.6
for
AT1G67680
ath-e.1
for
AT1G67680
ath-u.4
for
AT1G67650
gma-u.4
for
100810125
gma-u.4
for
100791472
ppo-u.4
for
7491965
mtr-u.4
for
25501703
sly-u.4
for
101255954
osa-u.4
for
4324904
1 AT4G24330 hypothetical protein (DUF1682) 828536 At4g24330 7.2 8.2
 4.4
 1.0
-0.1
 4.1
3.7
 5.2
3.8
 3.9
 6.3
 0.8
 2.6
2 AT1G75990 PAM domain (PCI/PINT associated module) protein 843931 At1g75990 6.9 7.8
 4.0
 1.5
1.2
 7.2
4.7
 5.6
4.3
 4.5
3.7
 4.5
4.3
 4.1
 4.6
1.6
3 ATERDJ2A DnaJ / Sec63 Brl domains-containing protein 844334 At1g79940 6.8 7.7
 5.1
 2.3
1.0
 4.9
 4.2
 2.4
2.4
 3.1
 1.0
 3.2
4 AT3G17900 heat-inducible transcription repressor 821058 At3g17900 6.4 7.0
 3.9
 1.7
 2.8
1.8
 2.7
1.5
 3.2
 2.2
0.4
 2.2
 3.0
5 AT5G11980 conserved oligomeric Golgi complex component-related / COG complex component-like protein 831071 At5g11980 6.2 6.8
 4.8
 1.1
 3.5
1.6
 3.7
2.7
 2.2
 3.9
 2.9
 3.5
6 AT1G77840 Translation initiation factor IF2/IF5 844119 At1g77840 6.1 6.3
 5.0
 3.0
0.9
 2.8
2.7
 4.0
3.9
 4.9
3.7
 2.1
 3.4
2.0
 3.1
2.9
7 AT4G11380 Adaptin family protein 826741 At4g11380 6.0 6.6
 3.9
 1.7
1.3
 4.3
4.2
 3.6
3.5
 4.6
2.0
 3.6
 2.0
 3.4
8 HSP91 heat shock protein 91 844333 At1g79930 6.0 6.5
 5.1
 1.0
 3.1
3.0
 3.5
2.8
 4.3
0.8
 4.7
2.6
 3.4
2.4
 3.8
2.7
9 AT5G06110 DnaJ and myb-like DNA-binding domain-containing protein 830498 At5g06110 5.9 6.2
 5.0
 2.3
0.9
 1.8
1.7
 1.8
1.6
 3.2
1.9
 3.3
2.8
 0.7
 2.9
10 AT1G31730 Adaptin family protein 840060 At1g31730 5.8 6.8
 3.0
 1.3
 3.6
3.2
 3.7
2.9
 0.4
 3.4
 2.9
 3.9
11 AT3G57890 Tubulin binding cofactor C domain-containing protein 824958 At3g57890 5.8 6.1
 4.5
 1.4
1.2
 2.8
2.2
 2.4
2.3
 3.0
1.2
 6.1
3.8
 6.3
 2.0
12 UBP24 ubiquitin-specific protease 24 829213 At4g30890 5.8 5.9
 4.3
 1.6
 2.6
1.3
 1.9
0.8
 2.2
 1.3
 3.0
1.3
 1.1
13 AT5G20600 ribosomal RNA processing-like protein 832182 At5g20600 5.8 6.3
 6.0
 1.5
 3.3
2.5
 4.6
3.9
 3.0
 3.2
 3.3
 1.9
14 AT2G21390 Coatomer, alpha subunit 816678 At2g21390 5.8 6.0
 2.6
 1.3
0.8
 5.7
4.5
 5.3
4.9
 3.8
3.5
 5.0
5.0
 6.5
3.5
 2.8
2.8
15 AT5G11490 adaptin family protein 831021 At5g11490 5.7 6.0
 4.2
 1.4
 3.8
3.7
 4.6
4.5
 2.8
 2.2
 2.4
 1.8
16 TPLATE ARM repeat superfamily protein 821081 At3g01780 5.7 6.6
 3.4
 2.4
 2.8
2.1
 3.6
1.9
 3.4
 4.9
 3.1
 3.1
1.7
17 ACBP4 acyl-CoA binding protein 4 819707 At3g05420 5.7 5.9
 4.2
 1.2
1.0
 5.5
2.9
 4.2
1.8
 4.4
1.8
 3.9
 3.9
 1.7
18 AT1G48900 Signal recognition particle, SRP54 subunit protein 841312 At1g48900 5.7 6.2
 5.3
 4.4
1.9
 4.2
3.8
 5.0
4.2
 2.2
2.0
 4.7
1.2
 3.8
1.7
 5.5
0.2
19 AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein 832986 At5g28740 5.6 6.1
 2.9
 0.7
 1.5
0.5
 1.6
1.5
 2.5
 3.7
 2.2
 1.4
20 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 820928 At3g16760 5.6 6.3
 3.5
 1.5
 1.2
1.1
 1.9
1.0
 3.3
 3.4
 4.0
 -0.2
21 TIF3B1 translation initiation factor 3B1 832826 At5g27640 5.6 6.0
 5.6
 1.7
1.1
 5.4
5.1
 5.6
5.4
 4.3
4.1
 4.7
 3.6
 3.3
22 AT3G63460 transducin family protein / WD-40 repeat family protein 825521 At3g63460 5.5 6.2
 3.9
 2.6
 5.5
4.2
 5.8
3.7
 2.9
2.8
 4.5
 2.6
 2.7
23 AT5G61970 signal recognition particle-related / SRP-like protein 836318 At5g61970 5.5 5.7
 4.4
 1.3
 5.8
1.8
 6.0
1.4
 2.6
1.3
 5.7
 4.7
3.2
 4.3
24 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 834457 At5g44320 5.5 6.1
 5.0
 2.1
0.7
 5.1
4.6
 5.2
4.6
 3.7
0.3
 5.7
 4.0
 2.9
25 ADK1 adenylate kinase 1 836459 At5g63400 5.4 6.1
 3.5
 0.2
-1.3
 3.4
2.7
 4.2
3.4
 2.5
2.4
 2.7
 2.7
0.8
 5.2
3.7
26 AT1G31780 oligomeric golgi complex subunit 840065 At1g31780 5.4 5.7
 3.4
 0.7
 4.3
 3.6
 1.7
 5.5
 3.4
 1.5
27 AT5G08670 ATP synthase alpha/beta family protein 830768 At5g08670 5.4 5.8
 1.6
 2.3
0.5
 6.6
6.2
 6.8
6.0
 4.9
4.4
 5.5
0.5
 1.5
0.9
 2.4
2.1
28 HAP13 Clathrin adaptor complexes medium subunit family protein 842372 At1g60780 5.4 5.8
 2.0
 4.1
0.7
 4.2
3.7
 3.9
3.5
 1.4
 4.2
3.6
 3.6
2.1
 0.7
0.4
29 ADL6 dynamin-like protein 6 837568 At1g10290 5.3 5.8
 4.4
 2.5
2.2
 3.8
3.7
 3.8
3.3
 2.1
2.1
 3.3
2.1
 4.4
0.8
 2.1
1.8
30 LARP1c winged-helix DNA-binding transcription factor family protein 829743 At4g35890 5.3 6.0
 2.5
 2.7
1.3
 3.9
2.9
 3.9
3.3
 4.6
2.6
 4.7
3.4
 1.9
1.8
 2.6
31 AT3G07660 flocculation protein (DUF1296) 819957 At3g07660 5.3 6.0
 3.6
 2.3
 3.5
3.3
 3.7
3.5
 3.5
2.0
 3.2
 1.3
0.4
 0.1
32 EIF3A eukaryotic translation initiation factor 3A 826746 At4g11420 5.3 5.6
 5.0
 1.0
 5.0
2.9
 5.0
2.7
 4.7
4.1
 5.8
 3.6
1.7
 4.4
33 AT1G67170 sarcolemmal membrane-associated protein 843037 At1g67170 5.3 5.6
 4.6
 0.8
 1.9
 0.1
 1.7
 3.0
 1.1
 1.8
34 HIT1 Membrane trafficking VPS53 family protein 841472 At1g50500 5.2 5.9
 2.3
 1.4
 4.0
2.5
 3.5
2.6
 0.4
 2.6
 3.0
 2.2
35 AT5G05520 Outer membrane OMP85 family protein 830435 At5g05520 5.2 5.6
 5.5
 0.6
-0.9
 2.9
2.3
 4.0
2.8
 4.8
3.1
 4.6
2.3
 1.9
 0.6
36 Tudor1 TUDOR-SN protein 1 830626 At5g07350 5.2 5.6
 4.5
 1.4
1.1
 5.2
5.1
 6.8
5.5
 4.5
0.7
 5.8
 3.9
1.1
 4.0
37 eIFiso4G1 MIF4G domain-containing protein / MA3 domain-containing protein 835897 At5g57870 5.2 5.5
 5.0
 2.6
0.3
 4.9
4.4
 4.8
4.3
 5.1
4.9
 6.5
 2.2
 4.5
1.2
38 EMB1467 NADH-ubiquinone dehydrogenase 833729 At5g37510 5.2 5.5
 2.9
 1.1
 4.7
4.1
 4.3
3.6
 3.3
1.9
 5.3
 2.5
 3.8
39 AT1G11480 eukaryotic translation initiation factor-like protein 837691 At1g11480 5.2 5.1
 4.0
 1.1
 1.5
1.4
 1.4
1.1
 2.9
2.0
 3.9
 1.4
 0.7
40 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family protein 821872 At3g22980 5.1 5.3
 5.0
 2.4
 1.9
 2.8
 3.7
 2.2
 1.5
 2.2
41 AT2G25670 uncharacterized protein 817108 At2g25670 5.1 5.7
 2.7
 1.1
-1.3
 3.9
3.1
 4.6
3.6
 4.5
3.5
 3.9
2.4
 3.9
3.9
 2.6
42 AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 817938 At2g33730 5.1 5.3
 4.0
 2.1
 1.0
-0.1
 1.6
-0.5
 1.4
-0.1
 2.9
 0.9
0.6
 3.1
43 MAC5A CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 837248 At1g07360 5.1 5.3
 4.9
 1.6
1.4
 3.5
1.9
 2.2
2.2
 1.4
0.9
 4.7
 1.6
-0.6
 1.4
0.3
44 DL1C DYNAMIN-like 1C 838048 At1g14830 5.1 5.4
 2.7
 1.5
1.4
 2.8
2.0
 2.1
1.9
 3.3
2.1
 4.2
3.7
 5.8
5.4
 1.6
1.2
45 AT1G70770 transmembrane protein (Protein of unknown function DUF2359, transmembrane) 843414 At1g70770 5.1 5.0
 4.2
 1.9
-0.1
 3.7
3.6
 4.9
4.9
 3.8
-0.4
 4.3
 3.3
1.4
 4.2
46 AT2G32850 Protein kinase superfamily protein 817846 At2g32850 5.1 5.0
 5.4
 2.6
 2.3
2.0
 1.8
1.7
 1.8
 3.5
 3.3
 1.6
1.5
47 AT4G38200 SEC7-like guanine nucleotide exchange family protein 829976 At4g38200 5.0 5.8
 3.7
 1.8
1.2
 1.9
1.2
 2.5
1.4
 1.1
0.7
 2.1
 2.1
 1.6
1.4
48 mtLPD2 lipoamide dehydrogenase 2 820984 At3g17240 5.0 4.9
 4.6
 1.2
-0.0
 2.6
1.1
 2.0
0.8
 2.8
-0.5
 2.7
 2.7
0.6
 3.9
3.1
49 AT3G60860 SEC7-like guanine nucleotide exchange family protein 825257 At3g60860 5.0 5.4
 3.7
 1.8
0.4
 3.4
2.0
 4.7
3.1
 2.5
1.5
 1.8
1.4
 3.5
 2.6
50 AT4G12780 Chaperone DnaJ-domain superfamily protein 826890 At4g12780 5.0 5.3
 4.4
 2.1
1.5
 2.9
2.8
 3.4
2.7
 2.0
1.7
 2.3
1.5
 4.1
2.4
 1.8
-0.1
The preparation time of this page was 1.7 [sec].