Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-r.6   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.9   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.notissue   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.tis   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.str   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.hor   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.bio   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.lig   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-e.1   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-u.4   WRI1   Integrase-type DNA-binding superfamily protein 
 ppo-u.4   7455773   AP2-like ethylene-responsive transcription factor At1g16060 
 mtr-u.4   25491215   AP2-like ethylene-responsive transcription factor At1g16060 
 sly-u.4   101253986   AP2-like ethylene-responsive transcription factor At1g16060 
 sly-u.4   101251231   ethylene-responsive transcription factor WRI1 

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Top 50 coexpressed genes to WRI4 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath280   Valine, leucine and isoleucine degradation  2 49 2.17
 ath52   Galactose metabolism  1 57 -
 ath30   Pentose phosphate pathway  1 58 -
 ath40   Pentose and glucuronate interconversions  1 108 -
 ath500   Starch and sucrose metabolism  2 172 -

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ath:WRI4 (Integrase-type DNA-binding superfamily protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
WRI4
ath-r.6
for
WRI4
ath-m.9
for
WRI4
ath-m.4.notissue
for
WRI4
ath-m.4.tis
for
WRI4
ath-m.4.str
for
WRI4
ath-m.4.hor
for
WRI4
ath-m.4.bio
for
WRI4
ath-m.4.lig
for
WRI4
ath-e.1
for
WRI4
ath-u.4
for
WRI1
ppo-u.4
for
7455773
mtr-u.4
for
25491215
sly-u.4
for
101253986
sly-u.4
for
101251231
1 MCCA methylcrotonyl-CoA carboxylase alpha chain 838362 At1g03090 7.5 7.1
 5.9
 16.5
 3.7
 4.5
 3.0
 2.4
 2.1
 7.4
 -0.5
 -0.1
 -1.5
 -1.5
 -1.2
2 AKINBETA1 5'-AMP-activated protein kinase beta-2 subunit protein 832243 At5g21170 7.2 7.3
 5.2
 2.8
 2.5
 5.0
 4.2
 4.7
 1.8
 8.7
 -0.6
 -0.3
-0.3
 -1.7
 -0.5
 0.5
3 AT2G17880 Chaperone DnaJ-domain superfamily protein 816298 At2g17880 6.4 5.7
 5.4
 1.4
 2.4
 4.5
 5.3
 2.8
 5.3
 3.7
 1.1
-0.8
 0.4
-0.1
 -1.5
-1.6
 0.4
-0.5
 0.3
-0.4
4 STP1 sugar transporter 1 837667 At1g11260 6.0 6.5
 3.9
 3.0
 0.9
 4.9
 4.9
 3.2
 3.4
 4.1
 0.3
0.1
 0.7
0.2
 0.5
0.3
 1.5
-0.2
 1.4
1.1
5 ASN1 glutamine-dependent asparagine synthase 1 823888 At3g47340 5.9 5.3
 5.0
 9.2
 3.8
 4.3
 3.2
 1.8
 3.5
 4.5
 0.5
0.3
 0.9
0.7
 0.1
-0.3
 -0.1
-1.6
 0.1
-0.0
6 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 832356 At5g22920 5.7 5.1
 4.8
 13.4
 3.8
 3.9
 2.8
 3.7
 1.6
 6.4
 -0.6
-0.9
 -0.4
-0.9
 1.3
0.5
 -0.2
-1.7
 0.0
-0.6
7 ACBP3 acyl-CoA-binding domain 3 828524 At4g24230 5.7 6.2






5.8
 -1.0
 -0.8
-1.3
 -0.9
 0.4
 -0.0
8 AT1G56220 Dormancy/auxin associated family protein 842075 At1g56220 5.4 5.8
 3.7
 263.8
 2.6
 2.3
 1.4
 0.4
 2.5
 4.0
 0.1
 0.4
-0.3
 0.3
-0.1
 1.5
 -0.3
9 AT3G03150 uncharacterized protein 821070 At3g03150 5.4 4.8
 4.6
 516.2
 1.1
 2.0
 1.6
 1.9
 3.8
 4.0
 -0.1
-0.2
 -1.2
 -0.2
 1.2
-0.1
 0.4
-0.9
10 ETFQO electron-transfer flavoprotein:ubiquinone oxidoreductase 818941 At2g43400 5.2 5.1
 3.9
 246.5
 0.0
 3.5
 1.6
 0.7
 2.0
 2.8
 -1.0
 -0.5
 -1.6
 -2.5
 -1.3
11 TPS11 trehalose phosphatase/synthase 11 816385 At2g18700 5.2 5.1
 4.0
 14.7
 0.9
 4.5
 4.6
 1.9
 2.2
 5.0
 -0.4
-0.5
 0.3
-0.2
 -1.3
-1.9
 -0.8
-1.9
 0.6
0.2
12 AT3G15450 aluminum induced protein with YGL and LRDR motifs 820784 At3g15450 5.2 4.5
 4.6
 13.4
 3.5
 4.0
 3.1
 3.9
 2.0
 8.1
 0.2
-0.1
 0.3
0.2
 -2.1
-2.2
 0.1
-0.1
 1.3
0.7
13 AT1G02660 alpha/beta-Hydrolases superfamily protein 839544 At1g02660 5.2 4.1
 4.8
 113.7
 1.0
 2.8
 4.6
 0.7
 3.3
 3.4
 0.4
-0.1
 0.2
 -0.7
 0.1
 -0.3
14 SEN1 Rhodanese/Cell cycle control phosphatase superfamily protein 829730 At4g35770 5.2 4.6
 4.3
 9.9
 1.2
 4.4
 2.9
 2.6
 3.2
 5.5
 -0.2
-0.6
 -0.5
 -0.4
 -0.1
 -1.2
15 DIN4 Transketolase family protein 820547 At3g13450 5.1 5.1
 3.8
 98.7
 3.5
 4.0
 1.2
 1.0
 2.4
 3.7
 0.8
0.7
 -1.3
 -1.7
 -0.9
 -1.3
16 UVR3 DNA photolyase family protein 820804 At3g15620 4.8 5.5
 2.7
 131.3
 0.9
 1.9
 2.8
 2.1
 0.0
 4.7
 -1.0
 0.0
 -0.7
 -0.3
 -0.2
17 PGL1 6-phosphogluconolactonase 1 837931 At1g13700 4.7 4.5
 3.6
 23.7
 5.1
 3.7
 1.4
 5.0
 -0.9
 4.1
 0.2
 -1.3
-1.9
 -0.2
 0.3
0.1
 0.3
0.1
18 BXL2 beta-xylosidase 2 837940 At1g02640 4.6 4.0
 4.0
 41.0
 2.0
 3.2
 3.3
 5.4
 2.1
 3.7
 0.3
-1.9
 0.1
-0.0
 1.5
-0.3

19 AT3G62950 Thioredoxin superfamily protein 825470 At3g62950 4.6 4.5
 3.5
 4.0
 0.1
 4.2
 3.8
 4.5
 1.6
 3.4
 -0.1
 -1.0
 -0.9

20 AT2G30600 BTB/POZ domain-containing protein 817610 At2g30600 4.6 4.5
 3.4
 22.1
 2.3
 4.2
 2.7
 2.4
 1.2
 5.8
 0.8
 0.1
-0.1
 -1.8
 -1.8
 0.2
21 AT3G15630 plant/protein 820805 At3g15630 4.5 4.5
 3.3
 70.3
 2.9
 2.4
 2.3
 1.7
 2.6
 6.5
 0.6
-0.6
 -0.1
-1.0
 -1.6
 1.0
 0.5
22 AT1G30820 CTP synthase family protein 839964 At1g30820 4.4 3.9
 3.8
 48.0
 1.4
 3.4
 2.9
 1.1
 3.2
 4.5
 2.0
0.3
 1.4
0.5
 0.7
-1.0
 0.2
-0.2
 1.2
0.6
23 AT4G01330 Protein kinase superfamily protein 828117 At4g01330 4.4 4.3
 3.3
 23.0
 4.7
 3.4
 3.0
 3.0
 2.6
 2.8
 1.2
0.2
 0.1
0.1
 0.1
0.0
 -0.3
-0.5
 -0.5
-1.1
24 STY46 ACT-like protein tyrosine kinase family protein 830003 At4g38470 4.3 3.6
 3.9
 20.9
 1.0
 3.9
 3.1
 1.2
 2.5
 5.5
 0.9
-0.4
 0.4
-0.1
 -1.2
-1.5
 -0.5
-1.1
 0.1
-0.0
25 ATTPS6 UDP-Glycosyltransferase / trehalose-phosphatase family protein 843130 At1g68020 4.3 4.3
 3.2
 98.4
 0.8
 2.7
 3.7
 1.7
 1.8
 4.3
 1.0
0.3
 0.2
0.1
 -0.2
-1.7
 0.6
-0.8
 0.9
0.0
26 BGAL1 beta galactosidase 1 820584 At3g13750 4.2 5.2
 2.0
 139.9
 1.4
 2.4
 1.8
 3.3
 -0.2
 5.0
 0.1
-0.2
 1.8
0.7
 1.0
0.9
 0.8
0.4
 1.0
0.5
27 OPT4 oligopeptide transporter 4 836562 At5g64410 4.2 3.6
 3.6
 62.0
 1.5
 2.7
 2.0
 1.9
 1.8
 3.1
 -0.2
-1.2
 0.7
-0.5
 -0.8
 0.7
-0.5
 0.6
0.1
28 DIN10 Raffinose synthase family protein 832147 At5g20250 4.1 4.3
 2.8
 39.5
 1.9
 3.2
 1.7
 3.8
 3.2
 4.6
 -0.9
 0.0
-0.0
 -1.1
 -1.2
 -0.5
29 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein 834449 At5g44260 4.1 3.6
 3.4
 15.9
 1.6
 3.6
 4.5
 3.9
 2.9
 2.8
 0.1
-0.1
 0.3
-0.3
 0.2
 1.2
 1.1
30 AT5G19120 Eukaryotic aspartyl protease family protein 832032 At5g19120 4.0 3.7
 3.3
 57.9
 3.3
 3.0
 2.3
 2.0
 4.4
 4.9
 0.8
0.8
 1.1
1.0
 0.2
0.1
 0.3
0.0
 1.9
1.2
31 BCA6 beta carbonic anhydrase 6 842185 At1g58180 4.0 3.9
 3.1
 345.6
 0.7
 2.6
 1.5
 0.8
 1.9
 2.4
 -0.3



32 AT5G14470 GHMP kinase family protein 831298 At5g14470 4.0 3.5
 3.5
 767.5
 1.7
 1.8
 1.4
 0.7
 2.2
 1.7
 -1.3
-1.4
 -2.0
 -2.0
 1.9
 1.2
33 BZO2H3 bZIP transcription factor family protein 832990 At5g28770 4.0 3.5
 3.4
 24.1
 1.8
 3.6
 2.3
 2.9
 1.3
 3.9
 0.1
-0.8
 0.7
0.1
 -0.1
-1.5
 0.7
-0.7
 0.6
-0.8
34 AT5G24490 30S ribosomal protein 832520 At5g24490 4.0 4.0
 2.8
 128.4
 1.7
 2.1
 2.4
 2.2
 2.2
 4.5
 -0.2
 -0.1
-0.9
 -0.6
 -0.5
 0.8
35 ADF9 actin depolymerizing factor 9 829649 At4g34970 4.0 4.3
 2.6
 28.4
 1.2
 3.1
 1.3
 4.7
 1.8
 1.8
 0.0
-0.9
 -0.7
-1.2
 -0.5
 0.6
 -0.1
36 DYL1 dormancy-associated protein-like 1 839729 At1g28330 3.9 4.0
 2.9
 288.8
 1.6
 1.4
 3.4
 1.4
 2.1
 3.6
 0.7
0.1
 -0.7
 -0.1
 1.5
1.0
 0.5
-0.1
37 ATXRCC1 BRCT domain-containing DNA repair protein 844382 At1g80420 3.9 4.3
 2.4
 15.5
 1.4
 4.3
 2.1
 1.4
 1.8
 2.8
 -0.5
 -1.6
 -0.3
 -0.4
 0.1
38 AT2G38820 DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506) 818464 At2g38820 3.8 3.4
 3.3
 638.9
 1.6
 1.7
 1.2
 2.6
 2.6
 1.7
 -0.0
-0.1
 -0.0
-0.3
 1.3
1.0
 0.7
0.5
 0.1
0.1
39 NF-YC4 nuclear factor Y, subunit C4 836466 At5g63470 3.8 4.0






3.1
 1.9
1.7
 0.5
0.0
 0.5
-0.1
 0.9
0.6
 0.5
0.4
40 J8 Chaperone DnaJ-domain superfamily protein 844432 At1g80920 3.8 3.7
 2.9
 92.5
 1.1
 3.0
 2.3
 2.3
 1.0
 5.3
 -0.1
 -1.0
-1.3
 -1.8
 -0.3
-0.7
 0.4
-0.5
41 bHLH121 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 821523 At3g19860 3.8 3.2
 3.3
 234.7
 0.8
 2.4
 2.0
 2.9
 1.7
 2.0
 -1.3
 1.0
-0.5
 0.1
-1.0
 0.2
 0.4
42 AT4G19160 transglutaminase family protein 827654 At4g19160 3.8 4.0
 2.5
 27.0
 1.3
 3.3
 2.2
 1.0
 1.6
 5.1
 -0.1
 -0.4
-0.7
0.3
-0.7
 -0.9
-1.9
43 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 839471 At1g03520 3.8 4.4
 2.1
 34.2
 2.2
 3.3
 1.9
 2.2
 1.1
 3.1
 0.0
-0.8
 -0.3
-1.1
 0.7
 -0.7
 0.1
44 AT1G22890 uncharacterized protein 838896 At1g22890 3.7 3.3
 3.2
 507.1
 1.0
 2.4
 3.2
 1.0
 0.6
 3.2
 -0.3
-1.5



45 AT2G33830 Dormancy/auxin associated family protein 817950 At2g33830 3.7 3.5
 3.0
 559.2
 1.2
 1.0
 2.6
 1.2
 0.7
 4.2
 0.7
0.1
 -0.7
 -0.1
 1.5
1.0
 0.5
-0.1
46 AT2G20670 sugar phosphate exchanger, putative (DUF506) 816595 At2g20670 3.7 3.8
 2.6
 46.8
 1.6
 3.2
 3.4
 2.4
 1.5
 5.0
 0.8
-0.1
 -0.0
-0.6
 -0.2
-1.1
 0.4
-0.3
 0.9
0.8
47 KCS2 3-ketoacyl-CoA synthase 2 839578 At1g04220 3.7 2.9
 3.5
 4735.1
 0.3
 -0.0
 1.3
 1.1
 -1.0
 1.1
 2.3
-0.5
 2.2
1.7
 3.7
2.6
 3.0
2.7
 1.1
0.8
48 AT1G75490 Integrase-type DNA-binding superfamily protein 843885 At1g75490 3.7 4.1
 2.3
 1018.5
 -0.4
 2.5
 2.5
 1.7
 0.8
 3.6
 0.4
0.2
 -0.5
-1.1
 0.1
-1.0
 -0.7
-1.3
 0.4
-0.4
49 AT1G02610 RING/FYVE/PHD zinc finger superfamily protein 837915 At1g02610 3.7 4.1






4.7
 -0.0
-1.1
 -1.0
 0.3
-0.8
 -0.2
 0.9
50 DRL1 dihydroflavonol 4-reductase-like1 829695 At4g35420 3.6 2.8
 3.5
 515.9
 0.7
 1.9
 1.7
 1.8
 -0.6
 1.0
 -0.2

-0.4
 -0.1
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