[←][→] sly   544104 Gene
functional annotation
Function   lycopene beta-cyclase      
GO BP
GO CC
GO MF
KEGG sly00906 [list] [network] Carotenoid biosynthesis (36 genes)
Protein NP_001234226.1  NP_001303688.1 
BLAST NP_001234226.1  NP_001303688.1 
Orthologous [Ortholog page] LYC (ath)  LOC4328572 (osa)  LOC7458943 (ppo)  LOC7496096 (ppo)  LOC11419142 (mtr)  LOC100783830 (gma)  LOC100810895 (gma)  LOC101267662 (sly)  LOC101290666 (tae)  LOC103870482 (bra)  LOC112325979 (ppo)  LOC123127204 (tae)  LOC123136803 (tae)  LOC123404754 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 1,  plas 1,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001234226.1)
chlo 4,  nucl 1,  plas 1,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001303688.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001234226.1)
other 5  (predict for NP_001303688.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
sly00906 Carotenoid biosynthesis 2
Genes directly connected with LCY1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 LOC101259835 psbP domain-containing protein 4, chloroplastic [detail] 101259835
7.0 PTC52 protochlorophyllide-dependent translocon component 52, chloroplastic [detail] 101255583
6.5 LOC101258970 probable anion transporter 6, chloroplastic [detail] 101258970
5.4 LOC101251832 thylakoid membrane protein TERC, chloroplastic [detail] 101251832
5.3 LOC543809 inositol-3-phosphate synthase [detail] 543809
5.1 LOC101247753 phytochrome A-associated F-box protein [detail] 101247753
5.0 LOC101258125 protein DETOXIFICATION 45, chloroplastic-like [detail] 101258125
4.9 LOC101245503 serine acetyltransferase 1, chloroplastic [detail] 101245503
4.7 LOC101267662 lycopene beta cyclase, chloroplastic [detail] 101267662
4.3 LOC101248132 uncharacterized LOC101248132 [detail] 101248132
4.0 LOC101244047 thioredoxin family protein [detail] 101244047
Coexpressed
gene list		 [Coexpressed gene list for LCY1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 544104      
Refseq ID (protein) NP_001234226.1 
NP_001303688.1 


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