[←][→] ppo   POPTR_001G320400v3 Gene
functional annotation
Function   serine hydroxymethyltransferase 4  
GO BP
GO CC
GO MF
KEGG pop00260 [list] [network] Glycine, serine and threonine metabolism (84 genes)
pop00460 [list] [network] Cyanoamino acid metabolism (53 genes)
pop00630 [list] [network] Glyoxylate and dicarboxylate metabolism (97 genes)
pop00670 [list] [network] One carbon pool by folate (26 genes)
pop01200 [list] [network] Carbon metabolism (345 genes)
pop01230 [list] [network] Biosynthesis of amino acids (300 genes)
pop01240 [list] [network] Biosynthesis of cofactors (305 genes)
Protein XP_002298678.3 
BLAST XP_002298678.3 
Orthologous [Ortholog page] EDA36 (ath)  SHM4 (ath)  LOC4350456 (osa)  LOC4352058 (osa)  LOC11415840 (mtr)  LOC11442479 (mtr)  LOC18107098 (ppo)  SHMT (gma)  LOC100815417 (gma)  LOC101256090 (sly)  LOC101259725 (sly)  LOC103833148 (bra)  LOC103863581 (bra)  LOC123046970 (tae)  LOC123054800 (tae)  LOC123181675 (tae)  LOC123190643 (tae)  LOC123428027 (hvu)  LOC123439336 (hvu) 
Subcellular
localization
wolf
cysk 4,  chlo 3,  cysk_nucl 3  (predict for XP_002298678.3)
Subcellular
localization
TargetP
other 9  (predict for XP_002298678.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 11
ppo00270 Cysteine and methionine metabolism 11
ppo01240 Biosynthesis of cofactors 6
ppo00450 Selenocompound metabolism 5
ppo00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 4
Genes directly connected with LOC7461640 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.3 LOC7495837 adenosylhomocysteinase [detail] 7495837
10.4 LOC7495188 S-adenosylmethionine synthase 1 [detail] 7495188
10.3 LOC7482366 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [detail] 7482366
6.3 LOC7476399 probable beta-1,4-xylosyltransferase IRX14 [detail] 7476399
6.0 LOC7489749 cysteine proteinase COT44 [detail] 7489749
4.6 LOC7493588 uncharacterized LOC7493588 [detail] 7493588
4.6 LOC18103883 transmembrane protein 56 [detail] 18103883
4.1 LOC18104999 pathogenesis-related protein 5 [detail] 18104999
Coexpressed
gene list		 [Coexpressed gene list for LOC7461640]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7461640      
Refseq ID (protein) XP_002298678.3 


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