Coexpression PCA detail

ath 

Platform: ath-r.c6-0 ath-e.c1-0

PC1	PC2	PC3	PC4	PC5	PC6	PC7	PC8	PC9	PC10
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Loading 1 SRP037984 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression loading run annotation attributes 1.4424 SRR1984536 0.8775 SRR1984541 0.7803 SRR1984527 0.0593 SRR1984530 -0.9953 SRR1984531 -5.956 SRR1170682 2 SRP031626 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression loading run annotation attributes 2.4739 SRR1013884 2.3114 SRR1013921 1.7084 SRR1013923 -2.1356 SRR1013894 -2.7527 SRR1013882 -2.9997 SRR1013891 3 SRP029957 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression loading run annotation attributes 0.6806 SRR988013 label WT-L-1/2/3 | genotype Wild type 0.4932 SRR988022 label CA-H-1/2/3 | genotype ca mutant 0.4009 SRR988019 label WT-L-1/2/3 | genotype Wild type -0.0653 SRR988010 label CA-H-1/2/3 | genotype ca mutant -0.1041 SRR988012 label WT-H-1/2/3 | genotype Wild type -2.9653 SRR988015 label CA-L-1/2/3 | genotype ca mutant 4 SRP351684 Transcriptomic profile of FERONIA mutant treated with Aradopside loading run annotation attributes 1.0075 SRR17281137 genotype fer | treatment control 0.6816 SRR17281135 genotype fer | treatment control 0.6578 SRR17281141 genotype WT | treatment Aradopside -0.233 SRR17281131 genotype fer | treatment Aradopside -0.2649 SRR17281144 genotype WT | treatment control -2.9594 SRR17281133 genotype fer | treatment Aradopside 5 SRP310860 Spider mite egg extract modifies Arabidopsis response to future infestations loading run annotation attributes 0.9578 SRR13977114 source_name Treated_plants_24h_Rep3 0.8237 SRR13977109 source_name Control_plants_72h_Rep1 0.8017 SRR13977106 source_name Control_plants_3h_Rep1 -0.874 SRR13977107 source_name Control_plants_3h_Rep2 -1.3431 SRR13977120 source_name Treated_plants_72h_Rep3 -2.8769 SRR13977116 source_name Treated_plants_3h_Rep2 6 SRP108336 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type loading run annotation attributes 2.02 SRR5631409 line epiHybrid 150 1.9857 SRR5631405 line epiHybrid 92 1.8663 SRR5631413 line epiHybrid 150 -1.9395 SRR5631422 line epiHybrid 232 -2.235 SRR5631414 line epiHybrid 150 -2.8305 SRR5631429 line epiRIL 92 7 SRP306752 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20] loading run annotation attributes 1.8006 SRR13724846 genotype mbd9-3 atxr5/6 (W) 1.0335 SRR13724843 genotype stubl2-3 atxr5/6 (W) 0.7227 SRR13724842 genotype stubl2-3 atxr5/6 (W) -0.96 SRR13724840 genotype atxr5/6 (W) -1.1535 SRR13724838 genotype atxr5/6 (W) -2.7172 SRR13724845 genotype mbd9-3 atxr5/6 (W) 8 SRP041593 Detection of Pol IV-dependent transcripts at the genomic scale in Arabidopsis reveals features and regulation of siRNA biogenesis loading run annotation attributes 1.7508 SRR1266839 source_name dcl 234 nrpd1 dsRNAseq | genotype/variation dcl 234 nrpd1 | molecule subtype double-stranded RNA 1.6875 SRR1266857 source_name dcl 234 nrpd1 PolyA- RNAseq | genotype/variation dcl 234 nrpd1 | molecule subtype rRNA-depleted Poly A- RNA 1.5535 SRR1266855 source_name dcl234 PolyA- RNAseq | genotype/variation dcl234 | molecule subtype rRNA-depleted Poly A- RNA -2.381 SRR1266850 source_name dcl 234 rdr2 RNAseq-DSN | genotype/variation dcl 234 | molecule subtype total rRNA-depleted RNA -2.431 SRR1266849 source_name dcl 234 nrpd1 RNAseq-DSN | genotype/variation dcl 234 nrpd1 | molecule subtype total rRNA-depleted RNA -2.6699 SRR1266848 source_name dcl 234 RNAseq-DSN | genotype/variation dcl 234 | molecule subtype total rRNA-depleted RNA 9 SRP174146 BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana loading run annotation attributes 1.5458 SRR8361699 genotype bli-1-/- 0.9197 SRR8361705 genotype bli-1-/-ire1b-/- 0.887 SRR8361703 genotype bli-1-/-ire1b-/- -0.7895 SRR8361697 genotype bli-1-/- -1.0268 SRR8361700 genotype bli-1-/-ire1a-/- -2.626 SRR8361702 genotype bli-1-/-ire1a-/- 10 SRP280005 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana loading run annotation attributes 1.8604 SRR12583417 genotype lyk4 | growth medium 1/2 MS + 100mM NaCl | treatment SA187 1.7081 SRR12583394 genotype LYK4 OE | growth medium 1/2 MS | treatment mock 1.3943 SRR12583396 genotype WT | growth medium 1/2 MS | treatment SA187 -1.3075 SRR12583407 genotype lyk4 | growth medium 1/2 MS + 100mM NaCl | treatment mock -1.4778 SRR12583400 genotype lyk4 | growth medium 1/2 MS | treatment SA187 -2.562 SRR12583402 genotype LYK4 OE | growth medium 1/2 MS | treatment SA187	Loading 1 SRP281951 RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S loading run annotation attributes 0.755 SRR12620981 source_name Root | genotype eil3 | treatment +S 0.7432 SRR12620983 source_name Root | genotype eil3 | treatment -S 0.7359 SRR12620984 source_name Root | genotype eil3 | treatment -S -0.7825 SRR12620955 source_name Shoot | genotype eil3 | treatment +S -0.792 SRR12620956 source_name Shoot | genotype eil3 | treatment +S -0.8203 SRR12620961 source_name Shoot | genotype eil3 eil1 | treatment +S 2 SRP026541 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression loading run annotation attributes 0.7367 SRR926202 genotype Columbia wild-type | tissue root | treatment 10uM MeJA 0.724 SRR926201 genotype Columbia wild-type | tissue root | treatment 10uM MeJA 0.719 SRR926204 genotype Columbia wild-type | tissue root | treatment 10uM MeJA -0.7104 SRR925868 genotype Columbia wild-type | tissue shoot | treatment 10uM MeJA -0.7361 SRR925871 genotype jaz2-1 | tissue shoot | treatment 0uM MeJA -0.8043 SRR925865 genotype Columbia wild-type | tissue shoot | treatment 0uM MeJA 3 SRP091010 IMA1 OE #7-4 line compared to EYFP OE line (control) loading run annotation attributes 0.7875 SRR4381922 tissue Roots | treatment Control ES media | genotype 35spro:IMA1 ORF 0.7687 SRR4381920 tissue Roots | treatment Control ES media | genotype 35spro:IMA1 ORF 0.753 SRR4381923 tissue Roots | treatment Fe-deficient media | genotype 35spro:IMA1 ORF -0.6995 SRR4381928 tissue Whole rosettes | treatment Control ES media | genotype 35spro:IMA1 ORF -0.7574 SRR4381926 tissue Whole rosettes | treatment Control ES media | genotype 35spro:EYFP (transgenic control) -0.7973 SRR4381925 tissue Whole rosettes | treatment Control ES media | genotype 35spro:EYFP (transgenic control) 4 SRP337622 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency loading run annotation attributes 0.7776 SRR15931266 source_name 16 days old seedlings under normal conditions (1/2 MS) | tissue Root | treatment Mock 0.7585 SRR15931264 source_name 16 days old seedlings under normal conditions (1/2 MS) | tissue Root | treatment Mock 0.7503 SRR15931260 source_name 16 days old seedlings under drought stress (PEG) | tissue Root | treatment PEG+SA100 -0.7032 SRR15931259 source_name 16 days old seedlings under drought stress (PEG) | tissue Shoot | treatment PEG+SA190 -0.7371 SRR15931261 source_name 16 days old seedlings under normal conditions (1/2 MS) | tissue Shoot | treatment Mock -0.7962 SRR15931250 source_name 16 days old seedlings under drought stress (PEG) | tissue Shoot | treatment PEG 5 SRP065994 Identification of plant vacuolar transporters mediating phosphate storage loading run annotation attributes 0.7367 SRR2932464 tissue root | treatment Pi starvation | time 1 day | plant 35S:PHT5;1-GFP#12 0.7183 SRR2932452 tissue root | treatment Pi starvation | time 3 day | plant 35S:PHT5;1-GFP#12 0.7174 SRR2932446 tissue root | treatment Pi starvation | time 1 day | plant 35S:PHT5;1-GFP#12 -0.7292 SRR2932432 tissue shoot | treatment Pi starvation | time 3 day | plant Col-0 -0.7854 SRR2932426 tissue shoot | treatment Pi sufficiency | time 10 day | plant Col-0 -0.7954 SRR2932427 tissue shoot | treatment Pi sufficiency | time 10 day | plant 35S:PHT5;1-GFP#04 6 ERP119431 Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles loading run annotation attributes 0.7534 ERR3822141 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484891 | INSDC first public 2020-12-10T04:04:47Z | Submitter Id E-MTAB-8684:Sample 12 | age 11 | organism part root | sample name E-MTAB-8684:Sample 12 0.6913 ERR3822167 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484917 | INSDC first public 2020-12-10T04:04:48Z | Submitter Id E-MTAB-8684:Sample 7 | age 8 | organism part root | sample name E-MTAB-8684:Sample 7 0.6885 ERR3822139 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484889 | INSDC first public 2020-12-10T04:04:47Z | Submitter Id E-MTAB-8684:Sample 10 | age 6 | organism part root | sample name E-MTAB-8684:Sample 10 -0.7882 ERR3822155 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484905 | INSDC first public 2020-12-10T04:04:47Z | Submitter Id E-MTAB-8684:Sample 25 | age 8 | organism part rosette leaf | sample name E-MTAB-8684:Sample 25 -0.7937 ERR3822156 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484906 | INSDC first public 2020-12-10T04:04:47Z | Submitter Id E-MTAB-8684:Sample 26 | age 8 | organism part rosette leaf | sample name E-MTAB-8684:Sample 26 -0.7942 ERR3822161 NextSeq 500 sequencing; Transcription profiling of Arabidopsis thaliana roots and leaves in reaction to fungal (Laccaria bicolor) volatiles External Id SAMEA6484911 | INSDC first public 2020-12-10T04:04:48Z | Submitter Id E-MTAB-8684:Sample 30 | age 8 | organism part rosette leaf | sample name E-MTAB-8684:Sample 30 7 SRP119870 Transcriptomic characterization of spl7 and Col-0 ecotypes of Arabidopsis reveals new aspects of Fe-Cu crosstalk loading run annotation attributes 0.7857 SRR6166382 source_name Root | tissue Root | genotype spl7 | pre-treatment 25 μM Fe, 2.5 μM Cu | treatment +Fe, -Cu 0.7671 SRR6166381 source_name Root | tissue Root | genotype spl7 | pre-treatment 25 μM Fe, 2.5 μM Cu | treatment +Fe, -Cu 0.7472 SRR6166373 source_name Root | tissue Root | genotype spl7 | pre-treatment 25 μM Fe, 0.1 μM Cu | treatment +Fe, +Cu -0.7516 SRR6166418 source_name Rosettes | tissue Rosettes | genotype Col-0 (WT) | pre-treatment 25 μM Fe, 0.1 μM Cu | treatment -Fe, -Cu -0.7686 SRR6166413 source_name Rosettes | tissue Rosettes | genotype Col-0 (WT) | pre-treatment 25 μM Fe, 0.1 μM Cu | treatment -Fe, +Cu -0.79 SRR6166419 source_name Rosettes | tissue Rosettes | genotype Col-0 (WT) | pre-treatment 25 μM Fe, 0.1 μM Cu | treatment -Fe, -Cu 8 SRP064491 Dose-dependency of BHTC-triggered transcriptome changes in Arabidopsis thaliana loading run annotation attributes 0.8181 SRR2559266 tissue roots 0.8097 SRR2559267 tissue roots 0.8072 SRR2559268 tissue roots -0.6862 SRR2559269 tissue shoot -0.7496 SRR2559263 tissue shoot -0.7845 SRR2559264 tissue shoot 9 SRP288586 Transcriptional response of A. thaliana Root and Shoot tissue to light stress and presence of microbial communities loading run annotation attributes 0.7762 SRR12898870 source_name Root | inoculated with microbes Yes | condition normal 0.7707 SRR12898857 source_name Root | inoculated with microbes No | condition normal 0.7528 SRR12898858 source_name Root | inoculated with microbes No | condition normal -0.7605 SRR12898866 source_name Shoot | inoculated with microbes No | condition shade -0.7736 SRR12898861 source_name Shoot | inoculated with microbes No | condition normal -0.7809 SRR12898867 source_name Shoot | inoculated with microbes No | condition shade 10 SRP068145 Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana loading run annotation attributes 0.7668 SRR3087782 source_name roots of seedlings, Col-0 P- | tissue root | treatment Phosphate deficiency 0.7093 SRR3087772 source_name roots of seedlings, Col-0 P+ | tissue root | treatment Phosphate sufficiency 0.6932 SRR3087780 source_name roots of seedlings, Col-0 P+ | tissue root | treatment Phosphate sufficiency -0.5464 SRR3087785 source_name shoots of seedlings, Col-0 P- | tissue shoot | treatment Phosphate deficiency -0.7274 SRR3087775 source_name shoots of seedlings, Col-0 P+ | tissue shoot | treatment Phosphate sufficiency -0.7763 SRR3087783 source_name shoots of seedlings, Col-0 P+ | tissue shoot | treatment Phosphate sufficiency	Loading 1 SRP238250 SPA regulation of high ambient temperature induced gene expressions in Arabidopsis thaliana. loading run annotation attributes 0.7131 SRR10741406 temperature 22degC | genotype Col-0 0.6899 SRR10741407 temperature 22degC | genotype Col-0 0.6298 SRR10741408 temperature 22degC | genotype Col-0 -0.2803 SRR10741410 temperature 22degC | genotype spaQ -0.4967 SRR10741415 temperature 28degC | genotype spaQ -0.5414 SRR10741417 temperature 28degC | genotype spaQ 2 SRP091641 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity loading run annotation attributes 0.6951 SRR4426628 genotype pad4-1 | treatment Mock | replicate #2 | time 9 hpi 0.6662 SRR4426488 genotype dde2-2 ein2-1 pad4-1 sid2-2 | treatment Mock | replicate #3 | time 9 hpi 0.6618 SRR4426634 genotype pad4-1 sid2-2 | treatment Mock | replicate #2 | time 9 hpi -0.5076 SRR4426533 genotype Col-0 | treatment Pto AvrRpt2 | replicate #1 | time 16 hpi -0.5172 SRR4426749 genotype pad4-1 | treatment Pto AvrRpt2 | replicate #2 | time 6 hpi -0.5262 SRR4426761 genotype pad4-1 | treatment Pto AvrRpt2 | replicate #1 | time 12 hpi 3 SRP304983 Transcriptome in WT Col-0 and mik2-1 mutant upon SCOOP12 treatment. loading run annotation attributes 0.6402 SRR13646706 source_name wild type_seedling | genotype wild type | treatment none 0.5283 SRR13646714 source_name RLK7ECD-MIK2TK/rlk7_seedling | genotype RLK7ECD-MIK2TK/rlk7 | treatment 1 uM SCOOP12 for 1h 0.4631 SRR13646712 source_name RLK7ECD-MIK2TK/rlk7_seedling | genotype RLK7ECD-MIK2TK/rlk7 | treatment none -0.3812 SRR13646709 source_name wild type_seedling | genotype wild type | treatment 1 uM SCOOP12 for 1h -0.4384 SRR13646710 source_name wild type_seedling | genotype wild type | treatment 1 uM SCOOP12 for 6h -0.564 SRR13646711 source_name wild type_seedling | genotype wild type | treatment 1 uM SCOOP12 for 6h 4 SRP257291 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector loading run annotation attributes 0.6361 SRR11568021 genotype 35s-HaRxL21 Line 1 | treatment mock 0.6059 SRR11568033 genotype 35s-HaRxL21 Line 1 | treatment mock 0.5332 SRR11568016 genotype 35s-HaRxL21 Line 2 | treatment mock -0.4703 SRR11568012 genotype 35s-HaRxL21 Line 1 | treatment flg22 -0.5161 SRR11568017 genotype 35s-HaRxL21-EAR Line 2 | treatment flg22 -0.6099 SRR11568019 genotype 35s-HaRxL21-EAR Line 2 | treatment flg22 5 SRP233656 Arabidopsis QUANTIREX loading run annotation attributes 0.6314 SRR10555773 At-TR2_Col_T0 Title At-Col_T0 | genotype WT 0.6183 SRR10555748 At-TR2_710_T0 Title At-710_T0 | genotype 710: rks1.1 KO mutant 0.5809 SRR10555757 At-TR2_OE1_T0 Title At-OE1_T0 | genotype OE1: RKS1 surexpressor -0.3797 SRR10555777 At-TR1_R24_T6h Title At-R24_T6h | genotype R24: mutant complemented with resistant allele -0.4096 SRR10555731 At-TR3_R24_T90mn Title At-R24_T90mn | genotype R24: mutant complemented with resistant allele -0.4577 SRR10555768 At-TR3_OE1_T6h Title At-OE1_T6h | genotype OE1: RKS1 surexpressor 6 SRP272650 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity loading run annotation attributes 0.6263 SRR12272422 source_name tpr1-KO_0h_5-wk old leaves | genotype tpr1-KO | time_replicate replicate1 | treatment 0h_PstavrRPS4_infiltrated 0.5249 SRR12272427 source_name tpr1 tpl tpr4 -KO_0h_5-wk old leaves | genotype tpr1 tpl tpr4 -KO | time_replicate replicate1 | treatment 0h_PstavrRPS4_infiltrated 0.4969 SRR12272444 source_name eds1-2_0h_5-wk old leaves | genotype eds1-2 | time_replicate replicate2 | treatment 0h_PstavrRPS4_infiltrated -0.5483 SRR12272430 source_name tpr1 tpl tpr4 -KO_24h_5-wk old leaves | genotype tpr1 tpl tpr4 -KO | time_replicate replicate1 | treatment 24h_PstavrRPS4_infiltrated -0.5846 SRR12272440 source_name tpr1-KO_24h_5-wk old leaves | genotype tpr1-KO | time_replicate replicate2 | treatment 24h_PstavrRPS4_infiltrated -0.585 SRR12272443 source_name tpr1 tpl tpr4 -KO_24h_5-wk old leaves | genotype tpr1 tpl tpr4 -KO | time_replicate replicate2 | treatment 24h_PstavrRPS4_infiltrated 7 SRP066116 RNA-seq analysis of chitin-triggered transcriptional reprogramming in the Arabidopsis mapkkk5 mutant loading run annotation attributes 0.621 SRR2921856 genotype mapkkk5 | treatment mock 0.5228 SRR2921847 genotype mapkkk5 | treatment mock 0.4523 SRR2921848 genotype mapkkk5 | treatment mock -0.4597 SRR2921865 genotype mapkkk5 | treatment chitin -0.4901 SRR2921845 genotype Col-0 (WT) | treatment chitin -0.5013 SRR2921861 genotype Col-0 (WT) | treatment chitin 8 ERP113389 The effect of ?-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots loading run annotation attributes 0.6184 ERR3079488 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230291 | INSDC last update 2019-01-21T15:45:04Z | Submitter Id E-MTAB-7612:DMSO_0h_2 | sample name E-MTAB-7612:DMSO_0h_2 0.5786 ERR3079489 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230292 | INSDC last update 2019-01-21T15:45:04Z | Submitter Id E-MTAB-7612:DMSO_0h_3 | sample name E-MTAB-7612:DMSO_0h_3 0.5353 ERR3079487 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230290 | INSDC last update 2019-01-21T15:45:04Z | Submitter Id E-MTAB-7612:DMSO_0h_1 | sample name E-MTAB-7612:DMSO_0h_1 -0.3862 ERR3079508 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230311 | INSDC last update 2019-01-21T15:45:05Z | Submitter Id E-MTAB-7612:MB3_6h_1 | injury wounding | sample name E-MTAB-7612:MB3_6h_1 -0.4016 ERR3079506 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230309 | INSDC last update 2019-01-21T15:45:05Z | Submitter Id E-MTAB-7612:MB3_3h_2 | injury wounding | sample name E-MTAB-7612:MB3_3h_2 -0.4147 ERR3079507 NextSeq 500 sequencing; The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots External Id SAMEA5230310 | INSDC last update 2019-01-21T15:45:05Z | Submitter Id E-MTAB-7612:MB3_3h_3 | injury wounding | sample name E-MTAB-7612:MB3_3h_3 9 SRP256286 Transcriptional reprogramming in transgenic Arabidopsis plants expressing C4G2A and a cas-1 mutant upon activation of plant immunity. loading run annotation attributes 0.618 SRR11540648 source_name A. thaliana Col-0 wild-type | experimental conditions MOCK 12h. 16/8h day-light on 1/2 MS 0.611 SRR11540655 source_name A. thaliana Col-0 Transgenic line | experimental conditions MOCK 12h. 16/8h day-light on 1/2 MS 0.588 SRR11540645 source_name A. thaliana Col-0 wild-type | experimental conditions MOCK 12h. 16/8h day-light on 1/2 MS -0.5306 SRR11540675 source_name A. thaliana Col-0 mutant | experimental conditions flg22 1uM 12h. 16/8h day-light on 1/2 MS -0.5439 SRR11540676 source_name A. thaliana Col-0 mutant | experimental conditions flg22 1uM 12h. 16/8h day-light on 1/2 MS -0.5672 SRR11540668 source_name A. thaliana Col-0 Transgenic line | experimental conditions flg22 1uM 12h. 16/8h day-light on 1/2 MS 10 SRP014482 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana loading run annotation attributes 0.615 SRR525108 source_name Bgh K1-infected B12 leaves, 6hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant expressing MLA1-HA | fungal isolate Blumeria graminis f. sp. hordei isolate K1 | virulence avirulent | time 6hpi 0.5379 SRR525110 source_name Bgh K1-infected B12 leaves, 6hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant expressing MLA1-HA | fungal isolate Blumeria graminis f. sp. hordei isolate K1 | virulence avirulent | time 6hpi 0.5299 SRR525109 source_name Bgh K1-infected B12 leaves, 6hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant expressing MLA1-HA | fungal isolate Blumeria graminis f. sp. hordei isolate K1 | virulence avirulent | time 6hpi -0.4243 SRR525133 source_name Bgh K1-infected B12 leaves, 12hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant expressing MLA1-HA | fungal isolate Blumeria graminis f. sp. hordei isolate K1 | virulence avirulent | time 12hpi -0.4314 SRR525152 source_name Bgh A6-infected pps leaves, 12hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant | fungal isolate Blumeria graminis f. sp. hordei isolate A6 | virulence virulent | time 12hpi -0.4346 SRR525122 source_name Bgh K1-infected B12 leaves, 18hpi | plant strain Columbia-0 pen2-1 pad4-1 sag101-2 mutant expressing MLA1-HA | fungal isolate Blumeria graminis f. sp. hordei isolate K1 | virulence avirulent | time 18hpi	Loading 1 SRP334993 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes loading run annotation attributes 0.6087 SRR15679181 age 4 days after germination | genotype wild type 0.5831 SRR15679182 age 4 days after germination | genotype wild type 0.5787 SRR15679183 age 4 days after germination | genotype wild type -0.4187 SRR15679207 age 3 days after germination | genotype snrk1a1/a2 -0.4263 SRR15679175 age 3 days after germination | genotype snrk1a1/a2 -0.4783 SRR15679188 age 4 days after germination | genotype snrk1a1/a2 2 SRP365415 Transcriptome profiling of Arabidopsis roots upon lateral root induction in WT and TOR knock down [dataset1] loading run annotation attributes 0.5841 SRR18441279 genotype Col-0 | treatment NPA | replicate 2 0.5606 SRR18441278 genotype Col-0 | treatment NPA | replicate 3 0.4346 SRR18441296 genotype Col-0 | treatment NPA_Es | replicate 2 -0.3396 SRR18441286 genotype UB10pro_amiR-TOR | treatment IAA_Es | replicate 2 -0.3568 SRR18441282 genotype UB10pro_amiR-TOR | treatment IAA_Es | replicate 3 -0.3766 SRR18441284 genotype UB10pro_amiR-TOR | treatment IAA | replicate 2 3 SRP090458 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] loading run annotation attributes 0.5768 SRR4295817 genotype Col-0 | pre-treatment -P | phosphate availability Low (-Pi) 0.5668 SRR4295860 genotype phf1 | pre-treatment +P | phosphate availability High (+Pi) 0.5612 SRR4295857 genotype phf1 | pre-treatment +P | phosphate availability High (+Pi) -0.489 SRR4295892 genotype Col-0 | pre-treatment +P | phosphate availability Low (-Pi) -0.4896 SRR4295889 genotype Col-0 | pre-treatment -P | phosphate availability Low (-Pi) -0.5368 SRR4295897 genotype phr1 phl1 | pre-treatment +P | phosphate availability Low (-Pi) 4 SRP277946 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] loading run annotation attributes 0.5747 SRR12469847 bacteria presence CL69 | treatment Mock | experiment e2 0.5222 SRR12470189 bacteria presence CL69 | treatment Mock | experiment e1 0.4949 SRR12470075 bacteria presence CL69 | treatment flg22 | experiment e3 -0.4849 SRR12469769 bacteria presence MF181 | treatment flg22 | experiment e1 -0.5174 SRR12469643 bacteria presence MF181 | treatment flg22 | experiment e2 -0.5295 SRR12469640 bacteria presence MF181 | treatment Mock | experiment e2 5 SRP327415 Master transcription factors of plant immunity are targeted by a Ralstonia solanacearum effector loading run annotation attributes 0.5712 SRR15066741 age 10-day-old | genotype wild type | treatment with 500 μM INA for 0 h 0.2942 SRR15066747 age 10-day-old | genotype OERipAB | treatment with 500 μM INA for 0 h 0.157 SRR15066744 age 10-day-old | genotype wild type | treatment with 500 μM INA for 1 h -0.1865 SRR15066749 age 12-day-old | genotype OERipAB | treatment with 500 μM INA for 1 h -0.2283 SRR15066743 age 10-day-old | genotype wild type | treatment with 500 μM INA for 1 h -0.3099 SRR15066742 age 10-day-old | genotype wild type | treatment with 500 μM INA for 1 h 6 SRP169564 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression loading run annotation attributes 0.5249 SRR8206385 genotype shy2-2 | treatment DMSO | auxin_trt_time 0h | replicate 3 0.4384 SRR8206370 genotype shy2-2 | treatment DEX | auxin_trt_time 0h | replicate 3 0.3435 SRR8206398 genotype slr-1 | treatment DEX | auxin_trt_time 0h | replicate 1 -0.4104 SRR8206423 genotype slr-1 | treatment DMSO | auxin_trt_time 4h | replicate 2 -0.4702 SRR8206424 genotype slr-1 | treatment DMSO | auxin_trt_time 4h | replicate 3 -0.4785 SRR8206422 genotype slr-1 | treatment DMSO | auxin_trt_time 4h | replicate 1 7 SRP150217 Widespread inter-individual gene expression variability in Arabidopsis thaliana loading run annotation attributes 0.5212 SRR7289630 time point ZT24 | individual seedling seedling9 0.5157 SRR7289626 time point ZT24 | individual seedling seedling5 0.5018 SRR7289628 time point ZT24 | individual seedling seedling7 -0.4449 SRR7289538 time point ZT12 | individual seedling seedling14 -0.4466 SRR7289537 time point ZT12 | individual seedling seedling13 -0.4619 SRR7289533 time point ZT12 | individual seedling seedling1 8 SRP173766 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana loading run annotation attributes 0.5124 SRR8335144 source_name pif7 seedlings | genotype pif7 | temperature 27.0C | time of subjective day ZT8.0 0.3862 SRR8335130 source_name Col-0 seedlings | genotype Col-0 | temperature 27.0C | time of subjective day ZT8.0 0.2373 SRR8335131 source_name Col-0 seedlings | genotype Col-0 | temperature 27.0C | time of subjective day ZT12.0 -0.3134 SRR8335139 source_name pif7 seedlings | genotype pif7 | temperature 17.0C | time of subjective day ZT16.0 -0.4837 SRR8335132 source_name Col-0 seedlings | genotype Col-0 | temperature 27.0C | time of subjective day ZT16.0 -0.5177 SRR8335146 source_name pif7 seedlings | genotype pif7 | temperature 27.0C | time of subjective day ZT16.0 9 SRP272492 H2AK121ub in Arabidopsis favors a less accessible chromatin state at transcriptional regulation hotspots [RNA-seq] loading run annotation attributes 0.5076 SRR12265334 source_name wt_seedlings | genotype wt 0.4862 SRR12265333 source_name wt_seedlings | genotype wt 0.4572 SRR12265332 source_name wt_seedlings | genotype wt -0.3738 SRR12265341 source_name emf1_seedlings | genotype emf1 -0.3991 SRR12265342 source_name emf1_seedlings | genotype emf1 -0.442 SRR12265343 source_name emf1_seedlings | genotype emf1 10 SRP119267 RNA-Seq analysis comparing gene expression changes between Col-0 wild-type (WT) and sig2-2 mutant lines at the whole genome level loading run annotation attributes 0.5061 SRR6126617 source_name sigma factor 2-2 mutant | genotype/variation sigma factor 2-2 mutant | age 7-day-old 0.5024 SRR6217817 source_name sigma factor 2-2 mutant | genotype/variation sigma factor 2-2 mutant | age 7-day-old 0.436 SRR6126616 source_name sigma factor 2-2 mutant | genotype/variation sigma factor 2-2 mutant | age 7-day-old -0.4353 SRR6126608 source_name Col-0 wild-type (WT) | genotype/variation WT | age 1-day-old -0.4388 SRR6217808 source_name Col-0 wild-type (WT) | genotype/variation WT | age 1-day-old -0.4443 SRR6217807 source_name Col-0 wild-type (WT) | genotype/variation WT | age 1-day-old	Loading 1 SRP018266 Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome loading run annotation attributes 0.6604 SRR653596 source_name Long days LL, ZT 22, rep 3 0.6571 SRR653595 source_name Long days LL, ZT 22, rep 2 0.62 SRR653594 source_name Long days LL, ZT 22, rep 1 -0.3562 SRR653587 source_name Long days LL, ZT10, rep 3 -0.4007 SRR653582 source_name Long days LL, ZT6, rep 1 -0.4441 SRR653584 source_name Long days LL, ZT6, rep 3 2 SRP308941 The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A.Z eviction and active transcription in Arabidopsis[RNA-seq] loading run annotation attributes 0.6121 SRR13835592 genotype wild type | treatment 27oC for 12 hours 0.5108 SRR13835596 genotype ino80-5 | treatment 27oC for 12 hours 0.4862 SRR13835591 genotype wild type | treatment 27oC for 12 hours -0.4419 SRR13835576 genotype wild type | treatment 21oC for 1 hour -0.4522 SRR13835580 genotype wild type | treatment 27oC for 1 hour -0.468 SRR13835575 genotype wild type | treatment 21oC for 1 hour 3 SRP159259 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. loading run annotation attributes 0.6118 SRR7774150 0.5651 SRR7774151 0.3735 SRR7774155 -0.4837 SRR7774138 -0.5357 SRR7774136 -0.6048 SRR7774137 4 SRP323348 Differentially expressed transcriptomes of NADases mutant in Arabidopsis loading run annotation attributes 0.6114 SRR14766025 genotype srt2-1 x heterozygous srt1-4 0.6049 SRR14766024 genotype srt2-1 x heterozygous srt1-4 0.54 SRR14766018 genotype srt1-4 (At5g55760, SAIL_552_E02; heterozygous) -0.4479 SRR14766015 genotype parp1-2 x parp2-1 x parp3 -0.4483 SRR14766003 genotype Col-0 -0.5203 SRR14766014 genotype parp3-1 (At5g22470, SALK_108092) 5 SRP214076 Comparative transcriptome analysis of melatonin or auxin treated-Arabidopsis loading run annotation attributes 0.5977 SRR9666140 0.5424 SRR9666137 0.532 SRR9666131 -0.2072 SRR9666132 -0.3347 SRR9666135 -0.4169 SRR9666136 6 SRP201971 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types loading run annotation attributes 0.5469 SRR9331176 time point 24 h | agent flg22 0.4808 SRR9331166 time point 24 h | agent C6 0.4592 SRR9331171 time point 24 h | agent nlp20 -0.3904 SRR9331174 time point 1 h | agent C6 -0.3908 SRR9331169 time point 1 h | agent nlp20 -0.3973 SRR9331197 time point 1 h | agent C6 7 SRP051763 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data) loading run annotation attributes 0.5422 SRR1744386 source_name Whole aerial tissue 15 day old seedlings | genotype L4-2 | tissue aerial tissues of 15 day seedlings 0.5348 SRR1744387 source_name Whole aerial tissue 15 day old seedlings | genotype L4-2 | tissue aerial tissues of 15 day seedlings 0.4925 SRR1744383 source_name Whole aerial tissue 15 day old seedlings | genotype LerxC24 | tissue aerial tissues of 15 day seedlings -0.4022 SRR1744374 source_name Expanded mature leaves from 28 day old plants | genotype L4-1 | tissue Expanded mature leaves from 28 day old plants -0.4204 SRR1744376 source_name Expanded mature leaves from 28 day old plants | genotype L4-2 | tissue Expanded mature leaves from 28 day old plants -0.4601 SRR1744372 source_name Expanded mature leaves from 28 day old plants | genotype L3-2 | tissue Expanded mature leaves from 28 day old plants 8 SRP125388 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration loading run annotation attributes 0.5414 SRR6312313 source_name Hypocotyl tissue | hours after grafting 12 hours | condition Intact 0.4868 SRR6312314 source_name Hypocotyl tissue | hours after grafting 12 hours | condition Intact 0.4681 SRR6312310 source_name Hypocotyl tissue below graft junction | hours after grafting 12 hours | condition Grafted bottom -0.3263 SRR6312340 source_name Hypocotyl tissue below graft junction | hours after grafting 72 hours | condition Grafted bottom -0.362 SRR6312360 source_name Hypocotyl tissue below graft junction | hours after grafting 168 hours | condition Grafted bottom -0.3855 SRR6312349 source_name Hypocotyl tissue below graft junction | hours after grafting 120 hours | condition Grafted bottom 9 SRP277946 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] loading run annotation attributes 0.5149 SRR12469828 bacteria presence MF376 | treatment flg22 | experiment e2 0.5018 SRR12469827 bacteria presence MF376 | treatment flg22 | experiment e2 0.4705 SRR12469851 bacteria presence CL69 | treatment flg22 | experiment e2 -0.4154 SRR12469921 bacteria presence MF50 | treatment Mock | experiment e3 -0.4422 SRR12469898 bacteria presence MF33 | treatment Mock | experiment e3 -0.4583 SRR12470184 bacteria presence CL21 | treatment Mock | experiment e1 10 SRP273472 Chemical genetics approach identifies ABNORMAL INFLORESCENCE MERISTEM 1 as a putative target of a novel sulfonamide that protects Arabidopsis against photorespiratory stress [RNA-seq] loading run annotation attributes 0.5134 SRR12319411 growth condition Photorespiratory stress (2 days) | chemical treatment Pakerine (10 μM, dissolved in DMSO) 0.4928 SRR12319405 growth condition Photorespiratory stress (2 days) | chemical treatment DMSO (mock) 0.4364 SRR12319406 growth condition Photorespiratory stress (2 days) | chemical treatment DMSO (mock) -0.4255 SRR12319410 growth condition Photorespiratory stress (2 days) | chemical treatment Pakerine (10 μM, dissolved in DMSO) -0.4934 SRR12319407 growth condition control | chemical treatment Pakerine (10 μM, dissolved in DMSO) -0.5121 SRR12319402 growth condition control | chemical treatment DMSO (mock)	Loading 1 SRP095138 Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants (II) loading run annotation attributes 0.5931 SRR5112415 genotype/variation lincRNA11195 mutant | treatment none 0.5771 SRR5112414 genotype/variation lincRNA11195 mutant | treatment none 0.437 SRR5112413 genotype/variation lincRNA11195 mutant | treatment none -0.4315 SRR5112412 genotype/variation wild type | treatment ABA -0.5509 SRR5112410 genotype/variation wild type | treatment ABA -0.5513 SRR5112411 genotype/variation wild type | treatment ABA 2 SRP187708 RNA-seq analysis of Arabidopsis treated with abscisic acid (ABA) and its derivatives loading run annotation attributes 0.5368 SRR8689244 treatment DMSO 0.5269 SRR8689246 treatment DMSO 0.4801 SRR8689245 treatment DMSO -0.3968 SRR8689251 treatment 3'-propyl ABA -0.4665 SRR8689250 treatment 3'-propyl ABA -0.4719 SRR8689252 treatment 3'-propyl ABA 3 SRP163044 Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA loading run annotation attributes 0.5312 SRR7947064 source_name cold_0d_poly(A)+ | treatment 0 day post cold treatment 0.5303 SRR7947066 source_name cold_0d_poly(A)+ | treatment 0 day post cold treatment 0.5253 SRR7947065 source_name cold_0d_poly(A)+ | treatment 0 day post cold treatment -0.3556 SRR7947108 source_name drought_8h_poly(A)+ | treatment 8 hour post drought treatment -0.361 SRR7947107 source_name drought_8h_poly(A)+ | treatment 8 hour post drought treatment -0.3942 SRR7947109 source_name drought_8h_poly(A)+ | treatment 8 hour post drought treatment 4 SRP267690 B2 and B3 Raf-like protein kinases activate SnRK2s and are essential for abscisic acid signaling loading run annotation attributes 0.5097 SRR12037300 genotype m9 | treatment none 0.4395 SRR12037299 genotype m9 | treatment none 0.4321 SRR12037301 genotype m9 | treatment none -0.53 SRR12037302 genotype WT | treatment ABA -0.5305 SRR12037303 genotype WT | treatment ABA -0.5389 SRR12037304 genotype WT | treatment ABA 5 SRP238608 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock loading run annotation attributes 0.4924 SRR10760456 time point T9 | sampling temperature 22°C 0.4059 SRR10760457 time point T9 | sampling temperature 22°C 0.3525 SRR10760441 time point T1 | sampling temperature 22°C -0.2147 SRR10760423 time point T3 | sampling temperature 45°C -0.2781 SRR10760455 time point T8 | sampling temperature 22°C -0.3246 SRR10760439 time point T11 | sampling temperature 22°C 6 SRP219435 The LRX-RALF-FER cell wall integrity sensing module controls plant growth and salt stress responses by modulating multiple plant hormones loading run annotation attributes 0.4764 SRR10027520 source_name JKZ320 lrx345 NaCl 0h rep2 | genotype lrx345 0.4485 SRR10027519 source_name JKZ320 lrx345 NaCl 0h rep1 | genotype lrx345 0.317 SRR10027508 source_name JKZ320 WT NaCl 0h rep1 | genotype WT -0.4056 SRR10027512 source_name JKZ320 WT NaCl 6h rep3 | genotype WT -0.4071 SRR10027511 source_name JKZ320 WT NaCl 6h rep2 | genotype WT -0.4232 SRR10027510 source_name JKZ320 WT NaCl 6h rep1 | genotype WT 7 SRP063471 ABA is required for plant acclimation to a combination of salt and heat stress loading run annotation attributes 0.4712 SRR2302910 treatment Control 0.4362 SRR2302909 treatment Control 0.3683 SRR2302908 treatment Control -0.3762 SRR2302917 treatment Treated with salt and heat combination -0.3815 SRR2302919 treatment Treated with salt and heat combination -0.4678 SRR2302918 treatment Treated with salt and heat combination 8 SRP269252 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length loading run annotation attributes 0.4672 SRR12110255 time point ZT 13h 0.3661 SRR12110256 time point ZT 13h 0.2513 SRR12110257 time point ZT 13h -0.2724 SRR12110253 time point ZT 1h -0.3055 SRR12110254 time point ZT 1h -0.3183 SRR12110252 time point ZT 1h 9 SRP148438 Leaf age dependent transcriptome analysis in response to abscisic acid loading run annotation attributes 0.4654 SRR7182865 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 12 (L12) | replicate 2 0.4585 SRR7182864 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 12 (L12) | replicate 2 0.3951 SRR7182867 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 12 (L12) | replicate 3 -0.2929 SRR7182868 source_name Fully-expanded true leave 7 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 7 (L07) | replicate 1 -0.3037 SRR7182878 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 12 (L12) | replicate 3 -0.3511 SRR7182872 source_name Fully-expanded true leave 7 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 7 (L07) | replicate 3 10 SRP215218 Transcriptomic changes of Arabidopsis plants subjected to high light, heat stress and their combination loading run annotation attributes 0.4565 SRR9696662 stress Control | repeat 2 0.3907 SRR9696658 stress Control | repeat 1 0.2895 SRR9696666 stress Control | repeat 3 -0.2148 SRR9696661 stress Highlight + Heat stress | repeat 1 -0.314 SRR9696668 stress Heat stress | repeat 3 -0.3393 SRR9696664 stress Heat stress | repeat 2	Loading 1 SRP266133 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions loading run annotation attributes 0.498 SRR11934641 genotype adr1 triple | time 8h | treatment EV | rep 3 0.4957 SRR11934587 genotype nrg1.1 nrg1.2 | time 8h | treatment EV | rep 2 0.4769 SRR11934532 genotype herlperless | time 8h | treatment avrRps4 | rep 3 -0.2945 SRR11934540 genotype herlperless | time 0.5h | treatment avrRps4 | rep 2 -0.3104 SRR11934539 genotype herlperless | time 0.5h | treatment avrRpm1 | rep 1 -0.3106 SRR11934429 genotype wildtype (Col-0) | time 0.5h | treatment avrRpt2 | rep 1 2 ERP115370 Arabidopsis tissue atlas loading run annotation attributes 0.4867 ERR3333413 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618915 | Submitter Id E-MTAB-7978:Sample 32 | age 22 | developmental stage adult | organism part rosette leaf | sample name E-MTAB-7978:Sample 32 | sampling site rosette leaf 1 0.4072 ERR3333414 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618916 | Submitter Id E-MTAB-7978:Sample 33 | age 22 | developmental stage adult | organism part rosette leaf | sample name E-MTAB-7978:Sample 33 | sampling site rosette leaf 2 0.3988 ERR3333391 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618893 | Submitter Id E-MTAB-7978:Sample 12 | age 30 | developmental stage adult | organism part cauline leaf | sample name E-MTAB-7978:Sample 12 -0.3729 ERR3333421 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618923 | Submitter Id E-MTAB-7978:Sample 4 | age 28 to 35 | developmental stage flower stage 15 | organism part carpel | sample name E-MTAB-7978:Sample 4 -0.3745 ERR3333426 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618928 | Submitter Id E-MTAB-7978:Sample 44 | age 28 to 35 | developmental stage flower stage 9 | organism part flower | sample name E-MTAB-7978:Sample 44 -0.3922 ERR3333430 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618932 | Submitter Id E-MTAB-7978:Sample 48 | age 28 to 35 | developmental stage flower stage 13 | organism part flower | sample name E-MTAB-7978:Sample 48 3 SRP047144 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression loading run annotation attributes 0.4652 SRR1595601 cultivar upf1-5 | genotype upf1-5 | sample_type replicate 3 | treatment Upf1-5 DC3000 Cor- Hrps- 7hr 0.3149 SRR1595569 cultivar upf1-5 | genotype upf1-5 | sample_type replicate 2 | treatment Upf1-5 DC3000 Cor- Hrps- 7hr 0.3108 SRR1585304 cultivar upf1-5 | genotype upf1-5 | sample_type replicate 2 | treatment Upf1-5 MgCl2 7hr -0.3086 SRR1584414 genotype Col-0 | sample_type replicate 1 | treatment Col-0 DC3000 Cor-_AvrPphB+ 7hr | ecotype Col-0 -0.3461 SRR1582209 genotype Col-0 | sample_type replicate 1 | treatment Col-0 DC3000 Cor- 7hr | ecotype Col-0 -0.4697 SRR1584415 genotype Col-0 | sample_type replicate 2 | treatment Col-0 DC3000 Cor-_AvrPphB+ 7hr | ecotype Col-0 4 SRP034742 CATseq a comparative Arabidopsis Transcriptome - RNA-Seq part loading run annotation attributes 0.4618 SRR1061365 source_name Leaves replicate 2 | tissue Leaf 0.3894 SRR1061364 source_name Leaves replicate 2 | tissue Leaf 0.3604 SRR1061363 source_name Leaves replicate 1b | tissue Leaf -0.2828 SRR1061358 source_name Flower Buds replicate 1 | tissue Flower bud -0.3739 SRR1061359 source_name Flower Buds replicate 2 | tissue Flower bud -0.3755 SRR1061357 source_name Flower Buds replicate 1 | tissue Flower bud 5 SRP365239 Evaluation the effects of ectopic expression of TaF5H1 in Arabidopsis driven by its native promoter on the the cell wall biosynthesis and salt tolerance by RNA-seq loading run annotation attributes 0.4364 SRR18428445 source_name Arabidopsis seedlings harbour pTaF5H1:TaF5H1 | treatment untreated, normally grown for 6 hours | genotype harbour pTaF5H1:TaF5H1 0.2835 SRR18428443 source_name Arabidopsis seedlings harbour pTaF5H1:TaF5H1 | treatment untreated, normally grown for 6 hours | genotype harbour pTaF5H1:TaF5H1 0.2323 SRR18428444 source_name Arabidopsis seedlings harbour pTaF5H1:TaF5H1 | treatment untreated, normally grown for 6 hours | genotype harbour pTaF5H1:TaF5H1 -0.2423 SRR18428441 source_name Arabidopsis seedlings of wild-type (Col-0) | treatment treated by 200 mM NaCl for 6 hours | genotype wild-type (Col-0) -0.2717 SRR18428442 source_name Arabidopsis seedlings of wild-type (Col-0) | treatment treated by 200 mM NaCl for 6 hours | genotype wild-type (Col-0) -0.4653 SRR18428440 source_name Arabidopsis seedlings of wild-type (Col-0) | treatment treated by 200 mM NaCl for 6 hours | genotype wild-type (Col-0) 6 SRP074890 Nitric oxide(CysNO) mediated transcriptome profiling in Arabidopsis thaliana loading run annotation attributes 0.4297 SRR3499923 treatment buffer (1mM HCl) 0.425 SRR3499922 treatment buffer (1mM HCl) 0.3 SRR3499921 treatment buffer (1mM HCl) -0.3228 SRR3499926 treatment 1mM CysNO -0.3844 SRR3499931 treatment 1mM CysNO -0.3896 SRR3499930 treatment 1mM CysNO 7 SRP095465 Early ETI and PTI responses in Arabidopsis thaliana camta3-D (sr1-4d) mutant loading run annotation attributes 0.4254 SRR5123615 treatment Pst DC3000 AvrRpm1 OD600=0.001 | genotype Col-0 | time 4h 0.3777 SRR5123614 treatment Pst DC3000 AvrRpm1 OD600=0.001 | genotype Col-0 | time 4h 0.2462 SRR5123616 treatment Pst DC3000 AvrRpm1 OD600=0.001 | genotype Col-0 | time 4h -0.2918 SRR5123630 treatment 100 nM of flg22 | genotype camta3-D (sr1-4d) | time 1h -0.3439 SRR5123629 treatment 100 nM of flg22 | genotype camta3-D (sr1-4d) | time 1h -0.3443 SRR5123628 treatment 100 nM of flg22 | genotype camta3-D (sr1-4d) | time 1h 8 SRP223758 Integration of systemic signals in plants loading run annotation attributes 0.4227 SRR10205864 source_name Arabidopsis leaves | repeat 2 | time 0min | tissue Leaves 0.4206 SRR10205863 source_name Arabidopsis leaves | repeat 1 | time 0min | tissue Leaves 0.4193 SRR10205865 source_name Arabidopsis leaves | repeat 3 | time 0min | tissue Leaves -0.2982 SRR10205901 source_name Arabidopsis stems | repeat 3 | time 8min | tissue Stems -0.3132 SRR10205920 source_name Arabidopsis stems | repeat 1 | time 8min | tissue Stems -0.3155 SRR10205900 source_name Arabidopsis stems | repeat 2 | time 8min | tissue Stems 9 SRP070918 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2. loading run annotation attributes 0.4127 SRR3193371 source_name flg22 9 hrs; dde2-2 | genotype/variation dde2-2 | concise genotype name jEPS | hrs after flg22 infiltration 9 hrs | barcode ACTGT | gaiix lane 6 0.3853 SRR3193370 source_name flg22 9 hrs; Col-0 | genotype/variation Col-0 | concise genotype name JEPS | hrs after flg22 infiltration 9 hrs | barcode GTACT | gaiix lane 6 0.3209 SRR3193375 source_name flg22 9 hrs; dde2-2 ein2-1 | genotype/variation dde2-2 ein2-1 | concise genotype name jePS | hrs after flg22 infiltration 9 hrs | barcode GACACT | gaiix lane 6 -0.3917 SRR3193312 source_name flg22 1 hr; pad4-1 sid2-2 | genotype/variation pad4-1 sid2-2 | concise genotype name JEps | hrs after flg22 infiltration 1 hr | barcode CAGAGT | gaiix lane 2 -0.3984 SRR3193310 source_name flg22 1 hr; ein2-1 pad4-1 | genotype/variation ein2-1 pad4-1 | concise genotype name JepS | hrs after flg22 infiltration 1 hr | barcode CGAGAT | gaiix lane 2 -0.4243 SRR3193306 source_name flg22 1 hr; sid2-2 | genotype/variation sid2-2 | concise genotype name JEPs | hrs after flg22 infiltration 1 hr | barcode GTACT | gaiix lane 2 10 SRP090913 WallOmics loading run annotation attributes 0.4103 SRR8185482 number_of_replicons 1 | ecotype HOS | age 6W | geo_loc_name France | tissue Rosette | treatment 15°C 0.3671 SRR4360365 age 4W | number_of_replicons 1 | treatment 22¡C | ecotype Columbia | tissue Rosette | dev_stage 5.1 | geo_loc_name Poland 0.35 SRR8185484 number_of_replicons 2 | ecotype HOS | age 6W | geo_loc_name France | tissue Rosette | treatment 15°C -0.2455 SRR8185485 number_of_replicons 2 | ecotype Columbia | age 6W | geo_loc_name France | tissue Stems | treatment 22°C -0.2626 SRR8185439 number_of_replicons 2 | ecotype HRN | age 10W | geo_loc_name France | tissue Stems | treatment 15°C -0.2853 SRR8185449 number_of_replicons 3 | ecotype HOS | age 10W | geo_loc_name France | tissue Stems | treatment 15°C	Loading 1 SRP101641 Chloroplast signalling gates thermotolerance in Arabidopsis loading run annotation attributes 0.5133 SRR5330565 source_name Col0 WT seedlings | genotype wild type | growth conditions 22°C, short days (8 h light, 16 h dark), 170 umol light. | timepoint sampled ZT8 | replicate Only 0.4568 SRR5330597 source_name Col0 ss4-1 seedlings | genotype ss4-1 | growth conditions 17°C, short days (8 h light, 16 h dark), 170 umol light. | timepoint sampled ZT8 | replicate 1 0.4366 SRR5330573 source_name Col0 WT seedlings | genotype wild type | growth conditions 27°C, short days (8 h light, 16 h dark), 170 umol light. | timepoint sampled ZT8 | replicate Only -0.2472 SRR5330634 source_name Col0 WT seedlings grown in liquid media | genotype wild type | growth conditions 27°C, short days, 170 umol light, grown in liquid media, treated with chemical at ZT-1. | timepoint sampled ZT1 | replicate 2 -0.2493 SRR5330630 source_name Col0 WT seedlings grown in liquid media | genotype wild type | growth conditions 22°C, short days, 170 umol light, grown in liquid media, treated with chemical at ZT-1. | timepoint sampled ZT1 | replicate 2 -0.2577 SRR5330633 source_name Col0 WT seedlings grown in liquid media | genotype wild type | growth conditions 27°C, short days, 170 umol light, grown in liquid media, treated with chemical at ZT-1. | timepoint sampled ZT1 | replicate 2 2 SRP108492 Identification of differentially expressed genes by RNA-seq in AtGRP7 overexpression and knockdown lines loading run annotation attributes 0.489 SRR5642270 genotype Columbia 2, wt | time point LL36 0.3783 SRR5642272 genotype Columbia 2, wt | time point LL36 0.3495 SRR5642271 genotype Columbia 2, wt | time point LL36 -0.2742 SRR5642273 genotype AtGRP7 ox | time point LL24 -0.2928 SRR5642280 genotype grp7-1 8i | time point LL24 -0.3194 SRR5642279 genotype grp7-1 8i | time point LL24 3 SRP073485 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation loading run annotation attributes 0.4859 SRR3401769 genotype Col-0 DEXp:mYFP | time 8 h 0.4625 SRR3401770 genotype Col-0 DEXp:mYFP | time 8 h 0.4546 SRR3401804 genotype Col-0 pen2-1 pad4-1 sag101-2 dde2-2 ein2-1 sid2-2 (ppsdes) | time 8 h -0.4161 SRR3401790 genotype Col-0 pen2-1 pad4-1 sag101-2 dde2-2 ein2-1 sid2-2 (ppsdes) | time 0 h -0.4215 SRR3401788 genotype Col-0 pen2-1 pad4-1 sag101-2 dde2-2 ein2-1 sid2-2 (ppsdes) | time 0 h -0.4259 SRR3401809 genotype Col-0 pen2-1 pad4-1 sag101-2 dde2-2 ein2-1 sid2-2 (ppsdes) DEXp:MLACC-mYFP | time 0 h 4 SRP018266 Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome loading run annotation attributes 0.448 SRR653567 source_name Long days WT, ZT10, rep 1 | genotype Wild type 0.4063 SRR653569 source_name Long days WT, ZT10, rep 3 | genotype Wild type 0.3619 SRR653568 source_name Long days WT, ZT10, rep 2 | genotype Wild type -0.3336 SRR653580 source_name Long days LL, ZT2 rep 2 | genotype link1link2 double mutants -0.3363 SRR653561 source_name Long days WT, ZT2, rep 1 | genotype Wild type -0.3587 SRR653562 source_name Long days WT, ZT2, rep 2 | genotype Wild type 5 SRP104760 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant loading run annotation attributes 0.4281 SRR5467216 treatment Mock | minutes 300 0.3906 SRR5467197 treatment flg22 | minutes 0 0.3648 SRR5467176 treatment Mock | minutes 300 -0.2154 SRR5467223 treatment Ed | minutes 60 -0.2331 SRR5467198 treatment flg22 | minutes 60 -0.2496 SRR5467188 treatment flg22+Ed | minutes 60 6 SRP044776 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade loading run annotation attributes 0.4167 SRR1523952 source_name sav3-2_hypocotyl_high R:FR_3h | genotype/variation sav3-2 | exposed to high R:FR | treatment time 3h | tissue hypocotyl tissue 0.4131 SRR1523954 source_name sav3-2_hypocotyl_high R:FR_3h | genotype/variation sav3-2 | exposed to high R:FR | treatment time 3h | tissue hypocotyl tissue 0.3223 SRR1523933 source_name WT_cotyledon_low R:FR_7h | genotype/variation WT | exposed to low R:FR | treatment time 7h | tissue cotyledon -0.3108 SRR1523928 source_name WT_cotyledon_low R:FR_0.5h | genotype/variation WT | exposed to low R:FR | treatment time 0.5h | tissue cotyledon -0.3147 SRR1523923 source_name WT_cotyledon_low R:FR_1h | genotype/variation WT | exposed to low R:FR | treatment time 1h | tissue cotyledon -0.3215 SRR1523904 source_name WT_cotyledon_high R:FR_0.5h | genotype/variation WT | exposed to high R:FR | treatment time 0.5h | tissue cotyledon 7 SRP201971 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types loading run annotation attributes 0.4137 SRR9331167 time point 6 h | agent C6 0.3435 SRR9331168 time point 6 h | agent H2O 0.3377 SRR9331164 time point 6 h | agent nlp20 -0.1838 SRR9331196 time point 24 h | agent C6 -0.2164 SRR9331179 time point 24 h | agent C6 -0.2501 SRR9331200 time point 24 h | agent H2O 8 SRP093697 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH loading run annotation attributes 0.4119 SRR5038595 treatment MeJA | time 8h 0.3323 SRR5038607 treatment Mock | time 8h 0.3234 SRR5038594 treatment MeJA | time 8h -0.3544 SRR5038596 treatment BTH | time 1h -0.3761 SRR5038602 treatment Mock | time 1h -0.3853 SRR5038603 treatment Mock | time 1h 9 SRP362867 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses loading run annotation attributes 0.4049 SRR18254719 treatment Pto AvrRpm1 | area Area surrounding the infiltration zone (OUT) | time 6 hours post-infiltration | biological replicate A 0.4034 SRR18254717 treatment Pto AvrRpm1 | area Area surrounding the infiltration zone (OUT) | time 6 hours post-infiltration | biological replicate C 0.3839 SRR18254706 treatment Mock | area Infiltrated area (IN) | time 4 hours post-infiltration | biological replicate B -0.258 SRR18254714 treatment Mock | area Infiltrated area (IN) | time 0 hours post-infiltration | biological replicate C -0.2646 SRR18254742 treatment Pto AvrRpm1 | area Infiltrated area (IN) | time 1 hours post-infiltration | biological replicate B -0.2769 SRR18254729 treatment Pto AvrRpm1 | area Area surrounding the infiltration zone (OUT) | time 0 hours post-infiltration | biological replicate C 10 SRP324081 ARATH-IN-OUT loading run annotation attributes 0.4048 SRR14813603 ARATH-avrRpm1-OUT-6HPI-A Title ARATH-avrRpm1-OUT-6HPI 0.4031 SRR14813605 ARATH-avrRpm1-OUT-6HPI-C Title ARATH-avrRpm1-OUT-6HPI 0.3835 SRR14813580 ARATH-MOCK-IN-4HPI-B Title ARATH-MOCK-IN-4HPI -0.2578 SRR14813636 ARATH-MOCK-IN-0HPI-C Title ARATH-MOCK-IN-0HPI -0.2651 SRR14813632 ARATH-avrRpm1-IN-1HPI-B Title ARATH-avrRpm1-IN-1HPI -0.2761 SRR14813612 ARATH-avrRpm1-OUT-0HPI-C Title ARATH-avrRpm1-OUT-0HPI	Loading 1 SRP237325 Florigen family chromatin recruitment, competition and targets [RNA-Seq] loading run annotation attributes 0.5268 SRR10676655 genotype tfl1-1 | treatment 24-hour FRP | deseq2 analyzed for differential expression no 0.4926 SRR10676648 genotype WT | treatment 24-hour FRP | deseq2 analyzed for differential expression yes 0.4659 SRR10676650 genotype WT | treatment 24-hour FRP | deseq2 analyzed for differential expression yes -0.3897 SRR10676651 genotype tfl1-1 | treatment No Treatment | deseq2 analyzed for differential expression yes -0.458 SRR10676647 genotype WT | treatment No Treatment | deseq2 analyzed for differential expression yes -0.4828 SRR10676646 genotype WT | treatment No Treatment | deseq2 analyzed for differential expression yes 2 SRP187719 Transcriptomic analysis of pip5k1 pip5k2 mutant and wild type plants before or after inoculation with powdery mildew Erysiphe cichoracearum loading run annotation attributes 0.4363 SRR8689384 pathogen Erysiphe cichoracearum | time point 2 dpi | genotype Col-0 wild type 0.3424 SRR8689383 pathogen Erysiphe cichoracearum | time point 2 dpi | genotype Col-0 wild type 0.2986 SRR8689382 pathogen Erysiphe cichoracearum | time point 2 dpi | genotype Col-0 wild type -0.3277 SRR8689416 pathogen none | time point 7 d | genotype pip5k1 pip5k2 mutant -0.3696 SRR8689411 pathogen none | time point 5 d | genotype pip5k1 pip5k2 mutant -0.4126 SRR8689417 pathogen none | time point 7 d | genotype pip5k1 pip5k2 mutant 3 SRP293884 SPAAC-NAD-seq, a sensitive and accurate method to profile NAD+-capped transcripts loading run annotation attributes 0.4291 SRR13128984 antibody m7G-RNA antibody | treatment SPAAC-NAD reaction 0.3986 SRR13128983 antibody m7G-RNA antibody | treatment SPAAC-NAD reaction 0.3399 SRR13128982 antibody m7G-RNA antibody | treatment SPAAC-NAD reaction -0.3106 SRR13128987 antibody Mock antibody | treatment CuAAC-NAD reaction -0.3567 SRR13128986 antibody Mock antibody | treatment CuAAC-NAD reaction -0.406 SRR13128985 antibody Mock antibody | treatment CuAAC-NAD reaction 4 SRP318409 Interplay between gene expression, histone modifications, and DNA methylation mediated by miR778 during beet cyst nematode parasitism of Arabidopsis [RNA-seq] loading run annotation attributes 0.4083 SRR14418070 genotype Col-0 wild type | developmental stage 15 days old | treatment untreated 0.1905 SRR14418069 genotype Col-0 wild type | developmental stage 15 days old | treatment untreated 0.1659 SRR14418068 genotype Col-0 wild type | developmental stage 15 days old | treatment untreated -0.0974 SRR14418080 genotype suvh6 (SALK_1244_F04) | developmental stage 15 days old | treatment untreated -0.2676 SRR14418082 genotype suvh6 (SALK_1244_F04) | developmental stage 15 days old | treatment untreated -0.2755 SRR14418083 genotype suvh6 (SALK_1244_F04) | developmental stage 5 days post inoculation | treatment inoculated with 100 J2 H. schachtii per plant at 10 days old 5 SRP075885 Endoplasmic reticulum as a hub organizing the activities of microRNAs and a subset of endogenous siRNAs in Arabidopsis [RNA-Seq] loading run annotation attributes 0.401 SRR3606165 0.3453 SRR3606166 0.2241 SRR3606159 -0.291 SRR3606160 -0.4464 SRR3606162 -0.467 SRR3606155 6 SRP066001 Dehydration stress extends mRNA 3'' untranslated regions with noncoding RNA functions in Arabidopsis loading run annotation attributes 0.3957 SRR2932374 source_name 14d-old seedlings_dehydration_1hr | treated with dehydration (left on filter papers) for 1hr 0.3334 SRR2932375 source_name 14d-old seedlings_dehydration_1hr | treated with dehydration (left on filter papers) for 1hr 0.2464 SRR2932376 source_name 14d-old seedlings_dehydration_1hr | treated with dehydration (left on filter papers) for 1hr -0.1773 SRR2932367 source_name 14d-old seedlings_control | treated with none (control) -0.2973 SRR2932366 source_name 14d-old seedlings_control | treated with none (control) -0.3381 SRR2932378 source_name 14d-old seedlings_dehydration_3hrs | treated with dehydration (left on filter papers) for 3hrs 7 SRP361288 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory loading run annotation attributes 0.3927 SRR18124840 condition C28P | time point 2 0.3148 SRR18124807 condition C28PLT | time point 4 0.3028 SRR18124809 condition C28PLT | time point 2 -0.2916 SRR18124801 condition C28PLT | time point 24 -0.3218 SRR18124794 condition C28P | time point 12 -0.3499 SRR18124777 condition C28PLT | time point 24 8 SRP372716 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number loading run annotation attributes 0.3811 SRR18963430 source_name cells from young leaves and petioles | cell type cells from young leaves and petioles | genotype Col-0 | treatment young leaves and petioles from wild type Col-0 | time Retard Period (5weeks after germination) 0.363 SRR18963427 source_name cells from Mature leaves and petioles | cell type cells from Mature leaves and petioles | genotype Col-0 | treatment Mature leaves and petioles from Col-0 | time Retard Period (5weeks after germination) 0.3625 SRR18963431 source_name cells from young leaves and petioles | cell type cells from young leaves and petioles | genotype Col-0 | treatment young leaves and petioles from wild type Col-0 | time Retard Period (5weeks after germination) -0.2659 SRR18963424 source_name cells of whole shoot | cell type cells of whole shoot | genotype Col-0 | treatment whole shoot from Col-0 of 7 weeks | time Recovery Period (7weeks after germination) -0.2999 SRR18963413 source_name cells of whole shoot | cell type cells of whole shoot | genotype dpe2/phs1 | treatment whole shoot from dpe2/phs1 of 7 weeks | time Recovery Period (7weeks after germination) -0.4128 SRR18963423 source_name cells of whole shoot | cell type cells of whole shoot | genotype Col-0 | treatment whole shoot from Col-0 of 7 weeks | time Recovery Period (7weeks after germination) 9 SRP148438 Leaf age dependent transcriptome analysis in response to abscisic acid loading run annotation attributes 0.3753 SRR7182865 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 12 (L12) | replicate 2 0.3521 SRR7182877 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 12 (L12) | replicate 2 0.332 SRR7182875 source_name Fully-expanded true leave 12 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 12 (L12) | replicate 1 -0.3568 SRR7182861 source_name Fully-expanded true leave 7 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 7 (L07) | replicate 3 -0.3746 SRR7182872 source_name Fully-expanded true leave 7 of 28 to 35 day-old plants | treatment ABA | leaf age True leave 7 (L07) | replicate 3 -0.391 SRR7182860 source_name Fully-expanded true leave 7 of 28 to 35 day-old plants | treatment Mock | leaf age True leave 7 (L07) | replicate 3 10 SRP246871 half_edit - A new predictive method for E+ PPR binding loading run annotation attributes 0.3706 SRR11004660 source_name SK137584_3 | genotype mutant - knock-out,-AT5G10690 | age planting-date=02-NOV-17,harvest-date=13-DEC-17 0.2361 SRR11004657 source_name SK055676_3 | genotype mutant - knock-out, insertional mutagen, T-DNA-AT3G50420 | age 25.5 days 0.234 SRR11004654 source_name PGN_3 | genotype mutant - knock-out, insertional mutagen, T-DNA-AT1G56570 | age 25.5 days -0.2108 SRR11004655 source_name SK055676_1 | genotype mutant - knock-out, insertional mutagen, T-DNA-AT3G50420 | age 25.5 daysday -0.2139 SRR11004656 source_name SK055676_2 | genotype mutant - knock-out, insertional mutagen, T-DNA-AT3G50420 | age 25.5 days -0.2516 SRR11004652 source_name PGN_1 | genotype mutant - knock-out, insertional mutagen, T-DNA-AT1G56570 | age 25.5 days	Loading 1 SRP051763 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data) loading run annotation attributes 0.421 SRR1744366 source_name Expanded mature leaves from 28 day old plants | genotype L2-1 | tissue Expanded mature leaves from 28 day old plants 0.3782 SRR1744361 source_name Expanded mature leaves from 28 day old plants | genotype LerxC24 | tissue Expanded mature leaves from 28 day old plants 0.3691 SRR1744362 source_name Expanded mature leaves from 28 day old plants | genotype L1-1 | tissue Expanded mature leaves from 28 day old plants -0.3739 SRR2080044 source_name Whole aerial tissue 15 day old seedlings | tissue aerial tissues of 15 day seedlings | genotype L2-2 -0.3822 SRR2080049 source_name Whole aerial tissue 15 day old seedlings | tissue aerial tissues of 15 day seedlings | genotype S1-1 -0.3914 SRR2080056 source_name Whole aerial tissue 15 day old seedlings | tissue aerial tissues of 15 day seedlings | genotype Ler 2 SRP117360 The Arabidopsis transcription factor TCP5 during petal and inflorescence development loading run annotation attributes 0.4064 SRR6030895 source_name stage 12 petals, control for KO | tissue stage 12 petals | genotype/variation control for KO 0.3927 SRR6030896 source_name stage 12 petals, control for KO | tissue stage 12 petals | genotype/variation control for KO 0.37 SRR6030897 source_name stage 12 petals, control for KO | tissue stage 12 petals | genotype/variation control for KO -0.3523 SRR6030919 source_name inflorescence, TCP5 induction, 0hr | tissue inflorescence | genotype/variation 35S:TCP5 induction | time after induction 0hr -0.3543 SRR6030918 source_name inflorescence, TCP5 induction, 0hr | tissue inflorescence | genotype/variation 35S:TCP5 induction | time after induction 0hr -0.3784 SRR6030909 source_name inflorescence, control for induction, 0hr | tissue inflorescence | genotype/variation control for induction | time after induction 0hr 3 SRP110017 Dyw2-DYW2_OTP100: Identification of the transcriptome defects (nuclear and organelles) of the T-DNA KO mutants of DYW2 and OTP100 loading run annotation attributes 0.3998 SRR5725012 source_name nuwa_HO_1 | genotype mutant (nuwa Homozygote) 0.3519 SRR5725013 source_name nuwa_HO_2 | genotype mutant (nuwa Homozygote) 0.2269 SRR5725004 source_name dyw2_HE_2 | genotype mutant (dyw2 Heterozygote) -0.2262 SRR5725007 source_name dyw2_HO_2 | genotype mutant (nuwa Homozygote) -0.2335 SRR5725008 source_name dyw2_HO_3 | genotype mutant (dyw2 Homozygote) -0.2518 SRR5725006 source_name dyw2_HO_1 | genotype mutant (dyw2 Homozygote) 4 SRP301115 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours. loading run annotation attributes 0.3996 SRR13397356 treatment Bic pH 8.3 | extraction time 3h 0.3969 SRR13397355 treatment Bic pH 8.3 | extraction time 3h 0.3627 SRR13397357 treatment Bic pH 8.3 | extraction time 3h -0.2482 SRR13397379 treatment High pH 8.3 | extraction time 48h -0.2614 SRR13397380 treatment High pH 8.3 | extraction time 48h -0.2727 SRR13397381 treatment High pH 8.3 | extraction time 48h 5 SRP034742 CATseq a comparative Arabidopsis Transcriptome - RNA-Seq part loading run annotation attributes 0.377 SRR1061367 source_name Leaves replicate 4 | tissue Leaf 0.3628 SRR1061366 source_name Leaves replicate 3 | tissue Leaf 0.2877 SRR1061364 source_name Leaves replicate 2 | tissue Leaf -0.2351 SRR1061358 source_name Flower Buds replicate 1 | tissue Flower bud -0.2906 SRR1061360 source_name Flower Buds replicate 2 | tissue Flower bud -0.294 SRR1061359 source_name Flower Buds replicate 2 | tissue Flower bud 6 SRP222577 The DREAM complexes prevent genomic hypermethylation by repressing the expression of genes required for maintenance of DNA methylation [RNA-seq 1] loading run annotation attributes 0.3752 SRR10908149 tissue Arabidopsis seedlings | genotype wild type 0.3687 SRR10908150 tissue Arabidopsis seedlings | genotype wild type 0.323 SRR10908152 tissue Arabidopsis seedlings | genotype tcx5-/-tcx6-/- -0.2832 SRR10149757 tissue seedlings | genotype tcx5-/-tcx6-/- -0.2844 SRR10149756 tissue seedlings | genotype wild type -0.3227 SRR10149758 tissue seedlings | genotype tcx5-/-tcx6-/- 7 ERP115370 Arabidopsis tissue atlas loading run annotation attributes 0.3749 ERR3333392 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618894 | Submitter Id E-MTAB-7978:Sample 13 | age 22 | developmental stage adult | organism part rosette leaf | sample name E-MTAB-7978:Sample 13 | sampling site rosette leaf 7 distal part 0.3318 ERR3333393 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618895 | Submitter Id E-MTAB-7978:Sample 14 | age 22 | developmental stage adult | organism part rosette leaf | sample name E-MTAB-7978:Sample 14 | sampling site rosette leaf 7 proximal part 0.3205 ERR3333417 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618919 | Submitter Id E-MTAB-7978:Sample 36 | age 22 | developmental stage adult | organism part rosette leaf | sample name E-MTAB-7978:Sample 36 | sampling site rosette leaf 5 -0.2754 ERR3333427 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618929 | Submitter Id E-MTAB-7978:Sample 45 | age 28 to 35 | developmental stage flower stage 10 | organism part flower | sample name E-MTAB-7978:Sample 45 -0.3116 ERR3333398 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618900 | Submitter Id E-MTAB-7978:Sample 19 | age 28 to 35 | developmental stage flower stage 15 | organism part flower | sample name E-MTAB-7978:Sample 19 -0.3193 ERR3333426 Illumina HiSeq 2500 paired end sequencing; Arabidopsis tissue atlas External Id SAMEA5618928 | Submitter Id E-MTAB-7978:Sample 44 | age 28 to 35 | developmental stage flower stage 9 | organism part flower | sample name E-MTAB-7978:Sample 44 8 SRP091641 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity loading run annotation attributes 0.367 SRR4426946 genotype rpm1-3 rpad4-1 sid2-22 101C | treatment Mock | replicate #2 | time 1 hpi 0.3354 SRR4426942 genotype rpm1-3 rpad4-1 sid2-22 101C | treatment Pto AvrRpt2 | replicate #1 | time 1 hpi 0.3336 SRR4426361 genotype Col-0 | treatment Pto AvrRpt2 | replicate #2 | time 1 hpi -0.2857 SRR4426679 genotype pad4-1 | treatment Pto DC3000 | replicate #3 | time 24 hpi -0.2984 SRR4426542 genotype sid2-2 | treatment Pto DC3000 | replicate #2 | time 16 hpi -0.3114 SRR4426885 genotype Col-0 | treatment Pto AvrRpm1 | replicate #1 | time 12 hpi 9 SRP246179 Search for mitochondrial editing defect in an Arabidopsis PPR mutant loading run annotation attributes 0.3653 SRR10991453 source_name Total_otp90_1 | genotype otp90 mutant 0.3432 SRR10991450 source_name Total_col_1 | genotype wild type (WT) 0.3066 SRR10991455 source_name Total_otp90_3 | genotype otp90 mutant -0.3174 SRR10991445 source_name Mito_col_2 | genotype wild type (WT) -0.3367 SRR10991449 source_name Mito_otp90_3 | genotype otp90 mutant -0.3389 SRR10991448 source_name Mito_otp90_2 | genotype otp90 mutant 10 SRP144429 Hybrid vigour can be enhanced by delayed leaf senescence loading run annotation attributes 0.362 SRR7100826 accession Hybrid | genotype/variation wildtype 0.3359 SRR7100827 accession Hybrid | genotype/variation wildtype 0.2572 SRR7100828 accession Hybrid | genotype/variation wildtype -0.1056 SRR7100822 accession Ler-0 | genotype/variation widltype -0.1093 SRR7100832 accession C24 | genotype/variation NahG transgene -0.1388 SRR7100830 accession C24 | genotype/variation wildtype
Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT1G01270 tRNA-Gln 3766639 At1g01270 -0.96 AT4G27875 tRNA-Gln 3770202 At4g27875 -1.09 AT2G16240 tRNA-Gln 3767985 At2g16240 -1.34 AT3G50505 tRNA-Glu 3769695 At3g50505 -1.45 AT2G21700 tRNA-Gln 3768091 At2g21700 -1.52 AT3G61825 tRNA-Gln 3769764 At3g61825 -1.62 AT5G38180 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 833798 At5g38180 -2.18 AT1G08347 28716822 AT1G08347 -2.29 AT1G75970 tRNA-Glu 3767708 At1g75970 -2.35 RALFL8 ralf-like 8 842451 At1g61563 -2.68 AT4G11180 Disease resistance-responsive (dirigent-like protein) family protein 826720 At4g11180 -2.92 AT4G13445 tRNA-Glu 3770140 At4g13445 -2.97 AT5G26060 Plant self-incompatibility protein S1 family 832675 At5g26060 -3.37 AT3G50665 tRNA-Glu 3769697 At3g50665 -3.40 AT1G51250 Plant self-incompatibility protein S1 family 841548 At1g51250 -3.47 AT1G03890 RmlC-like cupins superfamily protein 839379 At1g03890 -3.82 AT3G26860 Plant self-incompatibility protein S1 family 822302 At3g26860 -3.83 ANX2 Malectin/receptor-like protein kinase family protein 832975 At5g28680 -3.92 RALFL15 RALF-like 15 28718292 At2g22055 -3.99 AT5G20390 Glycosyl hydrolase superfamily protein 832161 At5g20390 -4.12 AT1G62220 uncharacterized protein 842518 At1g62220 -4.22 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 833797 At5g38170 -4.24 AT1G31390 TRAF-like family protein 840029 At1g31390 -4.29 AT5G26692 Putative membrane lipoprotein 832711 At5g26692 -4.30 RALFL25 ralf-like 25 822108 At3g25165 -4.55 RALFL26 ralf-like 26 822109 At3g25170 -4.60 AT1G62070 uncharacterized protein 842503 At1g62070 -4.84 AT5G28690 carboxylate clamp-TPR protein (DUF1685) 832976 At5g28690 -4.85 AT1G11765 Plant self-incompatibility protein S1 family 837721 At1g11765 -4.89 LCR72 low-molecular-weight cysteine-rich 72 814745 At2g02140 -5.10 DAZ3 zinc finger (C2H2 type) family protein 829722 At4g35700 -5.15 LCR48 low-molecular-weight cysteine-rich 48 3769681 At3g48231 -5.17 MES4 methyl esterase 4 816890 At2g23580 -5.21 AT1G35490 bZIP family transcription factor 840442 At1g35490 -5.36 AT5G63085 Plant thionin family protein 5008327 At5g63085 -5.40 AT3G58330 phospholipase-like protein (PEARLI 4) family protein 825002 At3g58330 -5.58 AT3G43120 SAUR-like auxin-responsive protein family 823371 At3g43120 -5.64 AT5G15110 Pectate lyase family protein 831363 At5g15110 -5.75 AT1G31450 Eukaryotic aspartyl protease family protein 840035 At1g31450 -5.81 AT3G05725 hypothetical protein (DUF3511) 2745870 At3g05725 -5.83 A7 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 828956 At4g28395 -6.27 AT1G66210 Subtilisin-like serine endopeptidase family protein 842936 At1g66210 -6.27 AT5G38160 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 833796 At5g38160 -6.34 CHX23 cation/H+ exchanger 23 837063 At1g05580 -6.34 PERK7 Protein kinase superfamily protein 841351 At1g49270 -6.39 AT1G34095 uncharacterized protein 840308 At1g34095 -6.50 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family protein 818474 At2g38900 -6.57 LCR17 low-molecular-weight cysteine-rich 17 826782 At4g11760 -6.70 SESA3 seed storage albumin 3 828824 At4g27160 -6.74 AT1G09110 tRNA-Glu 3766687 At1g09110 -6.76 AT5G60615 Defensin-like (DEFL) family protein 3771542 At5g60615 -6.90 EC1.3 Egg cell-secreted protein (DUF1278) 816712 At2g21750 -6.94 AT1G23240 Caleosin-related family protein 838933 At1g23240 -6.95 AT1G49290 Rho guanine nucleotide exchange factor 841352 At1g49290 -7.03 AT1G62060 uncharacterized protein 842502 At1g62060 -7.08 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826433 At4g08670 -7.32 AT3G01250 uncharacterized protein 821184 At3g01250 -7.32 AT1G71470 uncharacterized protein 843488 At1g71470 -7.67 AT1G75870 uncharacterized protein 843920 At1g75870 -7.76 AT3G20220 SAUR-like auxin-responsive protein family 821566 At3g20220 -7.77 AT5G39880 uncharacterized protein 833985 At5g39880 -7.84 PRK2A Leucine-rich repeat protein kinase family protein 815274 At2g07040 -8.01 AT4G04090 BTB/POZ domain-containing protein 825720 At4g04090 -8.06 AT4G02250 Plant invertase/pectin methylesterase inhibitor superfamily protein 827589 At4g02250 -8.06 AT5G38760 Late embryogenesis abundant protein (LEA) family protein 833867 At5g38760 -8.09 SHT spermidine hydroxycinnamoyl transferase 816424 At2g19070 -8.17 AT1G68875 uncharacterized protein 843220 At1g68875 -8.21 AT1G66850 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 843003 At1g66850 -8.21 AT1G07017 28716598 AT1G07017 -8.65 AT2G26490 Transducin/WD40 repeat-like superfamily protein 817190 At2g26490 -8.70 AT2G13350 Calcium-dependent lipid-binding (CaLB domain) family protein 815821 At2g13350 -8.74 AT2G45405 uncharacterized protein 28718356 AT2G45405 -8.94 AT3G28810 mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) 822513 At3g28810 -9.02 AT2G35615 Eukaryotic aspartyl protease family protein 818129 At2g35615 -9.04 AT3G62710 Glycosyl hydrolase family protein 825445 At3g62710 -9.29 AT1G72290 Kunitz family trypsin and protease inhibitor protein 843561 At1g72290 -9.32 AT1G14940 Polyketide cyclase/dehydrase and lipid transport superfamily protein 838059 At1g14940 -9.34 AT1G04527 28716138 AT1G04527 -9.42 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 838271 At1g17010 -9.52 AT3G01230 splicing regulatory glutamine/lysine-rich-like protein 820795 At3g01230 -9.65 AT4G04402 two-component phosphorelay mediator 825765 At4g04402 -9.83 AT2G36550 haloacid dehalogenase-like hydrolase family protein 818228 At2g36550 -9.87 AT2G26850 F-box family protein 817226 At2g26850 -10.08 VGDH1 Plant invertase/pectin methylesterase inhibitor superfamily 819317 At2g47030 -10.30 AT5G07410 Pectin lyase-like superfamily protein 830632 At5g07410 -10.33 sks12 SKU5 similar 12 842006 At1g55570 -10.56 GRP16 glycine-rich protein 16 830647 At5g07540 -10.66 AT3G21570 proline-rich nuclear receptor coactivator 821711 At3g21570 -10.69 AT4G04077 6241116 At4g04077 -10.80 scpl38 serine carboxypeptidase-like 38 815137 At2g05850 -10.80 AT5G61720 hypothetical protein (DUF1216) 836294 At5g61720 -10.83 AT3G24250 glycine-rich protein 822012 At3g24250 -11.02 AtMT4a plant EC metallothionein family protein 818800 At2g42000 -11.08 sks11 SKU5 similar 11 820539 At3g13390 -11.13 AT5G48140 Pectin lyase-like superfamily protein 834866 At5g48140 -11.15 AT1G47540 Scorpion toxin-like knottin superfamily protein 841163 At1g47540 -11.17 AT1G14950 Polyketide cyclase/dehydrase and lipid transport superfamily protein 838060 At1g14950 -11.27 GASA2 GAST1 protein homolog 2 826546 At4g09610 -11.37 PGA4 polygalacturonase 4 839391 At1g02790 -11.40 KCS18 3-ketoacyl-CoA synthase 18 829603 At4g34520 -11.45	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC DOX1 Peroxidase superfamily protein 821135 At3g01420 225.62 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 820564 At3g13610 197.77 AT3G28550 Proline-rich extensin-like family protein 822485 At3g28550 188.98 UGT76B1 UDP-Glycosyltransferase superfamily protein 820307 At3g11340 178.27 OSM34 osmotin 34 826770 At4g11650 177.81 KTI1 kunitz trypsin inhibitor 1 843660 At1g73260 175.79 AT4G16260 Glycosyl hydrolase superfamily protein 827320 At4g16260 175.33 AT1G13520 hypothetical protein (DUF1262) 837912 At1g13520 174.92 AT2G45220 Plant invertase/pectin methylesterase inhibitor superfamily 819130 At2g45220 174.76 AT1G30700 FAD-binding Berberine family protein 839950 At1g30700 171.71 Prx37 Peroxidase superfamily protein 826447 At4g08770 171.48 GulLO2 D-arabinono-1,4-lactone oxidase family protein 819288 At2g46750 171.23 WRKY31 WRKY DNA-binding protein 31 828296 At4g22070 170.95 BGLU22 Glycosyl hydrolase superfamily protein 842945 At1g66280 170.80 AT5G44380 FAD-binding Berberine family protein 834464 At5g44380 170.10 AT4G28940 Phosphorylase superfamily protein 829015 At4g28940 169.24 MMP matrix metalloproteinase 843353 At1g70170 168.80 MAP18 microtubule-associated protein 18 834489 At5g44610 167.77 LAC7 laccase 7 820078 At3g09220 167.47 WRKY75 WRKY DNA-binding protein 75 831147 At5g13080 166.88 SDR4 NAD(P)-binding Rossmann-fold superfamily protein 822580 At3g29250 166.85 AT2G39530 Uncharacterized protein family (UPF0497) 818538 At2g39530 166.59 FLS5 flavonol synthase 5 836480 At5g63600 166.44 AT3G54580 Proline-rich extensin-like family protein 824623 At3g54580 166.17 UGT72E2 UDP-Glycosyltransferase superfamily protein 836802 At5g66690 165.48 AT1G23720 Proline-rich extensin-like family protein 838982 At1g23720 165.09 GLP9 germin-like protein 9 827113 At4g14630 164.72 GSTU25 glutathione S-transferase TAU 25 838289 At1g17180 164.50 PDE337 VQ motif-containing protein 843174 At1g68450 164.03 KOR2 Six-hairpin glycosidases superfamily protein 842872 At1g65610 163.10 AT2G40113 Pollen Ole e 1 allergen and extensin family protein 818601 At2g40113 162.73 AT2G05510 Glycine-rich protein family 815100 At2g05510 162.64 YLS9 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 818171 At2g35980 162.14 MSRB7 methionine sulfoxide reductase B7 828271 At4g21830 162.01 RABA1e RAB GTPase homolog A1E 827574 At4g18430 160.53 UCC2 uclacyanin 2 819088 At2g44790 160.25 AT5G53990 UDP-Glycosyltransferase superfamily protein 835482 At5g53990 159.80 AT2G44010 uncharacterized protein 819006 At2g44010 159.65 AT5G64100 Peroxidase superfamily protein 836531 At5g64100 159.22 CAX4 cation exchanger 4 831754 At5g01490 159.15 AT3G44326 F-box family protein 3769632 At3g44326 158.94 SPP1 sucrose-phosphatase 1 841567 At1g51420 157.11 UGT73D1 UDP-glucosyl transferase 73D1 824481 At3g53150 156.03 AT1G54890 Late embryogenesis abundant (LEA) protein-like protein 841928 At1g54890 155.94 WRKY72 WRKY DNA-binding protein 72 831365 At5g15130 155.90 WRKY61 WRKY DNA-binding protein 61 838467 At1g18860 155.61 AT3G04320 Kunitz family trypsin and protease inhibitor protein 819587 At3g04320 155.47 CHX17 cation/H+ exchanger 17 828470 At4g23700 155.37 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 836068 At5g59490 154.93 AT5G50760 SAUR-like auxin-responsive protein family 835148 At5g50760 154.46 GAD glutamate decarboxylase 831599 At5g17330 154.31 CYP710A1 cytochrome P450, family 710, subfamily A, polypeptide 1 818013 At2g34500 154.21 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 821833 At3g22620 153.94 CEN2 centrin 2 829855 At4g37010 153.70 PLP1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 829861 At4g37070 153.29 GLR2.5 glutamate receptor 2.5 830991 At5g11210 152.59 TGA10 bZIP transcription factor family protein 830575 At5g06839 152.58 AT5G12340 DUF4228 domain protein 831109 At5g12340 152.48 GSTU8 glutathione S-transferase TAU 8 820083 At3g09270 152.13 EXT3 extensin 3 838728 At1g21310 151.44 AT5G60530 late embryogenesis abundant protein-related / LEA protein-like protein 836174 At5g60530 151.05 AT1G13480 hypothetical protein (DUF1262) 837908 At1g13480 150.49 AT5G59530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 836072 At5g59530 149.95 GSTU12 glutathione S-transferase TAU 12 843328 At1g69920 149.56 GSTU22 glutathione S-transferase TAU 22 844169 At1g78340 149.44 AT3G46700 UDP-Glycosyltransferase superfamily protein 823823 At3g46700 149.42 DIN2 Glycosyl hydrolase superfamily protein 825184 At3g60140 148.78 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily protein 834825 At5g47740 148.62 MYB122 myb domain protein 122 843748 At1g74080 148.44 UPI Serine protease inhibitor, potato inhibitor I-type family protein 834378 At5g43580 148.02 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily 819368 At2g47550 147.93 AT5G06740 Concanavalin A-like lectin protein kinase family protein 830563 At5g06740 147.40 GPAT5 glycerol-3-phosphate acyltransferase 5 820316 At3g11430 147.34 PROPEP3 elicitor peptide 3 precursor 836614 At5g64905 146.81 PCR2 PLANT CADMIUM RESISTANCE 2 838052 At1g14870 146.72 HAK5 high affinity K+ transporter 5 826973 At4g13420 146.24 AT2G35730 Heavy metal transport/detoxification superfamily protein 818143 At2g35730 145.19 LRX1 leucine-rich repeat/extensin 1 837756 At1g12040 145.13 GLL22 GDSL-like Lipase/Acylhydrolase superfamily protein 841838 At1g54000 145.04 WIH3 cysteine-rich TM module stress tolerance protein 6240705 At3g49845 145.03 HRGP1 hydroxyproline-rich glycoprotein 824624 At3g54590 144.63 AT2G38380 Peroxidase superfamily protein 818419 At2g38380 144.54 AT3G61390 RING/U-box superfamily protein 825311 At3g61390 143.45 XTH14 xyloglucan endotransglucosylase/hydrolase 14 828687 At4g25820 142.86 AT4G24310 transmembrane protein, putative (DUF679) 828534 At4g24310 142.33 MSRB8 methionine sulfoxide reductase B8 828272 At4g21840 142.32 EXT12 Proline-rich extensin-like family protein 826970 At4g13390 142.15 AT2G37750 uncharacterized protein 818352 At2g37750 141.75 PHT1;1 phosphate transporter 1;1 834353 At5g43350 141.69 GSTU9 glutathione S-transferase tau 9 836368 At5g62480 141.57 AT5G12880 proline-rich family protein 831128 At5g12880 141.47 AT1G51860 Leucine-rich repeat protein kinase family protein 841613 At1g51860 141.36 AT1G30750 TPRXL 839955 At1g30750 141.35 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 821832 At3g22600 140.94 BGLU21 Glycosyl hydrolase superfamily protein 842944 At1g66270 140.94 FMO1 flavin-dependent monooxygenase 1 838508 At1g19250 140.73 AT3G47040 Glycosyl hydrolase family protein 823857 At3g47040 140.66 AATP1 AAA-ATPase 1 833998 At5g40010 140.53 ABCG6 ABC-2 type transporter family protein 831202 At5g13580 139.93 AT1G53625 uncharacterized protein 841798 At1g53625 139.17	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AGP31 arabinogalactan protein 31 839723 At1g28290 135.40 AT1G73620 Pathogenesis-related thaumatin superfamily protein 843696 At1g73620 127.63 GH9B13 glycosyl hydrolase 9B13 828080 At4g02290 126.90 AT5G54370 Late embryogenesis abundant (LEA) protein-like protein 835525 At5g54370 123.58 EXPA15 expansin A15 814838 At2g03090 122.22 XTH31 xyloglucan endo-transglycosylase-related 8 823634 At3g44990 120.37 AT3G49960 Peroxidase superfamily protein 824158 At3g49960 119.72 CYP71A27 cytochrome P450, family 71, subfamily A, polypeptide 27 827771 At4g20240 119.45 FLA10 FASCICLIN-like arabinogalactan-protein 10 825261 At3g60900 118.55 BAT1 HXXXD-type acyl-transferase family protein 829321 At4g31910 118.16 AT5G10130 Pollen Ole e 1 allergen and extensin family protein 830877 At5g10130 117.37 NLM1 NOD26-like major intrinsic protein 1 827641 At4g19030 117.19 AT2G18980 Peroxidase superfamily protein 816415 At2g18980 116.43 AT4G12520 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826864 At4g12520 114.98 AT3G03130 lisH domain-like protein 821080 At3g03130 114.93 NPY4 Phototropic-responsive NPH3 family protein 816835 At2g23050 114.58 AT1G52070 Mannose-binding lectin superfamily protein 841636 At1g52070 114.45 PRP3 proline-rich protein 3 825442 At3g62680 114.34 ARP1 RNA-binding (RRM/RBD/RNP motifs) family protein 824642 At3g54770 114.13 AT4G12510 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826863 At4g12510 113.74 AGP30 arabinogalactan protein 30 817946 At2g33790 113.05 AT3G19430 late embryogenesis abundant protein-related / LEA protein-like protein 821477 At3g19430 112.87 EXT10 Proline-rich extensin-like family protein 830552 At5g06640 111.84 AT3G59370 Vacuolar calcium-binding protein-like protein 825106 At3g59370 110.64 TRM10 GAR2-like protein 826784 At4g11780 110.51 AT3G54580 Proline-rich extensin-like family protein 824623 At3g54580 110.04 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 830378 At5g04960 109.74 AT4G11190 Disease resistance-responsive (dirigent-like protein) family protein 826721 At4g11190 109.09 EXT13 proline-rich extensin-like family protein 833473 At5g35190 108.66 BGLU21 Glycosyl hydrolase superfamily protein 842944 At1g66270 108.65 EXPB3 expansin B3 828940 At4g28250 108.22 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase 829048 At4g29270 108.02 AT1G23720 Proline-rich extensin-like family protein 838982 At1g23720 108.01 AT4G15160 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 827182 At4g15160 107.81 CER4 Jojoba acyl CoA reductase-related male sterility protein 829521 At4g33790 107.58 AT1G02810 Plant invertase/pectin methylesterase inhibitor superfamily 838078 At1g02810 107.35 AT4G22666 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 3770028 At4g22666 107.35 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily protein 840266 At1g33750 107.25 sks16 SKU5 similar 16 816895 At2g23630 106.71 ST4B sulfotransferase 4B 837902 At1g13420 106.63 EGL3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 842669 At1g63650 106.39 CYP82F1 cytochrome P450, family 82, subfamily F, polypeptide 1 817054 At2g25160 105.98 AGP13 arabinogalactan protein 13 828738 At4g26320 105.86 MRLK meristematic receptor-like kinase 824776 At3g56100 105.81 AGP3 arabinogalactan protein 3 830172 At4g40090 105.62 AT3G24240 Leucine-rich repeat receptor-like protein kinase family protein 822011 At3g24240 105.54 ENODL13 early nodulin-like protein 13 832580 At5g25090 105.52 AT4G14650 uncharacterized protein 827115 At4g14650 105.46 AT5G46900 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834735 At5g46900 105.06 AT1G63100 GRAS family transcription factor 842613 At1g63100 104.95 AT5G17820 Peroxidase superfamily protein 831650 At5g17820 104.92 AT4G20230 terpenoid synthase superfamily protein 827770 At4g20230 104.77 AT1G52060 Mannose-binding lectin superfamily protein 841635 At1g52060 104.76 TIP4;1 tonoplast intrinsic protein 4;1 817123 At2g25810 104.75 AT5G06630 proline-rich extensin-like family protein 830551 At5g06630 104.35 EXT6 Proline-rich extensin-like family protein 817037 At2g24980 104.31 AT4G31320 SAUR-like auxin-responsive protein family 829259 At4g31320 103.82 AT3G14540 Terpenoid cyclases/Protein prenyltransferases superfamily protein 820680 At3g14540 103.48 MLP34 MLP-like protein 34 843422 At1g70850 103.39 SKS1 SKU5 similar 1 828627 At4g25240 103.15 SHV2 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 834987 At5g49270 102.73 HRGP1 hydroxyproline-rich glycoprotein 824624 At3g54590 102.59 AT3G05980 uncharacterized protein 819769 At3g05980 102.19 AT3G51280 Tetratricopeptide repeat (TPR)-like superfamily protein 824291 At3g51280 101.62 AT3G45070 P-loop containing nucleoside triphosphate hydrolases superfamily protein 823642 At3g45070 101.36 AT4G08410 Proline-rich extensin-like family protein 826400 At4g08410 100.88 AT1G16630 uncharacterized protein 838232 At1g16630 100.62 AT2G25980 Mannose-binding lectin superfamily protein 817139 At2g25980 100.43 AT4G11210 Disease resistance-responsive (dirigent-like protein) family protein 826723 At4g11210 99.92 SP1L5 SPIRAL1-like5 828449 At4g23496 99.65 AT5G06940 Leucine-rich repeat receptor-like protein kinase family protein 830585 At5g06940 99.59 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 834609 At5g45700 99.39 AT4G08400 Proline-rich extensin-like family protein 826398 At4g08400 99.10 AT5G26290 TRAF-like family protein 832698 At5g26290 98.76 AT3G12870 uncharacterized protein 820470 At3g12870 98.21 EXPB1 expansin B1 816604 At2g20750 98.10 AT5G62340 Plant invertase/pectin methylesterase inhibitor superfamily protein 836355 At5g62340 98.09 CYP705A5 cytochrome P450, family 705, subfamily A, polypeptide 5 834850 At5g47990 97.91 EIR1 Auxin efflux carrier family protein 835813 At5g57090 97.85 AT1G67750 Pectate lyase family protein 843100 At1g67750 97.83 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein 831137 At5g12970 97.82 AT3G22540 hypothetical protein (DUF1677) 821825 At3g22540 97.67 AT4G26660 kinesin-like protein 828773 At4g26660 97.62 CYCB1;3 CYCLIN B1;3 820325 At3g11520 97.18 AT5G46890 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834734 At5g46890 97.13 AGP22 arabinogalactan protein 22 835406 At5g53250 97.12 XTH17 xyloglucan endotransglucosylase/hydrolase 17 842839 At1g65310 97.07 AT2G42110 uncharacterized protein 818811 At2g42110 97.04 AT4G38062 basic helix loop helix (bHLH) DNA-binding superfamily protein 28720214 AT4G38062 96.99 AT3G01260 Galactose mutarotase-like superfamily protein 821171 At3g01260 96.90 AT4G30170 Peroxidase family protein 829140 At4g30170 96.65 AT5G48310 portal protein 834884 At5g48310 96.57 AT5G40030 Protein kinase superfamily protein 834000 At5g40030 96.56 RCI3 Peroxidase superfamily protein 837028 At1g05260 96.46 ATLP-1 Pathogenesis-related thaumatin superfamily protein 838405 At1g18250 96.36 AT1G25510 Eukaryotic aspartyl protease family protein 839137 At1g25510 96.21 XYP2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 815865 At2g13820 95.87 AT1G56680 Chitinase family protein 842124 At1g56680 95.81 AT3G55230 Disease resistance-responsive (dirigent-like protein) family protein 824689 At3g55230 95.53 MYB66 myb domain protein 66 831327 At5g14750 95.36	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC MLP329 MLP-like protein 329 814682 At2g01530 145.03 SEN1 Rhodanese/Cell cycle control phosphatase superfamily protein 829730 At4g35770 136.84 AT5G54585 uncharacterized protein 835547 At5g54585 125.98 ASN1 glutamine-dependent asparagine synthase 1 823888 At3g47340 119.65 BXL1 beta-xylosidase 1 834996 At5g49360 119.22 TIP2;3 tonoplast intrinsic protein 2;3 834794 At5g47450 118.83 AT3G62950 Thioredoxin superfamily protein 825470 At3g62950 118.57 MLP34 MLP-like protein 34 843422 At1g70850 118.01 AT2G05540 Glycine-rich protein family 815103 At2g05540 116.63 CASP2 Uncharacterized protein family (UPF0497) 820328 At3g11550 115.60 AT1G33055 uncharacterized protein 840201 At1g33055 115.54 UMAMIT33 nodulin MtN21 /EamA-like transporter family protein 828919 At4g28040 114.97 FRO6 ferric reduction oxidase 6 835036 At5g49730 113.06 AT5G03615 28720572 AT5G03615 111.98 AT1G62510 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 842548 At1g62510 111.59 DOG1 delay of germination 1 834623 At5g45830 111.27 AT1G12010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 837753 At1g12010 110.35 AT1G61590 Protein kinase superfamily protein 842455 At1g61590 107.92 AT3G55230 Disease resistance-responsive (dirigent-like protein) family protein 824689 At3g55230 107.89 GLYI4 Lactoylglutathione lyase / glyoxalase I family protein 838107 At1g15380 107.70 AT3G43850 uncharacterized protein 823498 At3g43850 107.50 AT2G33830 Dormancy/auxin associated family protein 817950 At2g33830 106.98 SCPL13 serine carboxypeptidase-like 13 816829 At2g22980 106.90 AT4G39675 uncharacterized protein 830122 At4g39675 104.74 AT2G29290 NAD(P)-binding Rossmann-fold superfamily protein 817478 At2g29290 104.64 AT4G12520 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826864 At4g12520 104.39 AT1G19530 DNA polymerase epsilon catalytic subunit A 838540 At1g19530 104.34 AT1G72200 RING/U-box superfamily protein 843552 At1g72200 104.28 LHB1B1 light-harvesting chlorophyll-protein complex II subunit B1 818006 At2g34430 103.89 AT2G20670 sugar phosphate exchanger, putative (DUF506) 816595 At2g20670 102.96 AT4G30170 Peroxidase family protein 829140 At4g30170 102.88 AT4G12510 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826863 At4g12510 102.68 AT4G37220 Cold acclimation protein WCOR413 family 829876 At4g37220 102.67 SNG1 sinapoylglucose 1 816830 At2g22990 102.50 AT5G56100 glycine-rich protein / oleosin 835709 At5g56100 101.83 AT4G27450 aluminum induced protein with YGL and LRDR motifs 828854 At4g27450 100.90 BGAL4 beta-galactosidase 4 835789 At5g56870 100.73 AT1G49500 transcription initiation factor TFIID subunit 1b-like protein 841374 At1g49500 100.65 MYBL2 MYB-like 2 843443 At1g71030 100.36 AT4G34881 uncharacterized protein 6240750 At4g34881 100.18 AT4G36850 PQ-loop repeat family protein / transmembrane family protein 829838 At4g36850 99.56 AT3G15450 aluminum induced protein with YGL and LRDR motifs 820784 At3g15450 99.42 AT2G16980 Major facilitator superfamily protein 816201 At2g16980 99.34 AT1G09765 28717163 AT1G09765 99.27 LHCB2.3 photosystem II light harvesting complex protein 2.3 822391 At3g27690 98.91 AT1G02610 RING/FYVE/PHD zinc finger superfamily protein 837915 At1g02610 98.54 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein 817479 At2g29300 98.26 AGP3 arabinogalactan protein 3 830172 At4g40090 97.80 PLP1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 829861 At4g37070 97.69 AT3G32980 Peroxidase superfamily protein 823067 At3g32980 97.58 AT3G01190 Peroxidase superfamily protein 821314 At3g01190 97.50 AT4G15990 uncharacterized protein 827283 At4g15990 97.31 CIPK20 CBL-interacting protein kinase 20 834622 At5g45820 97.19 AT5G51780 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 835252 At5g51780 97.05 AT3G25190 Vacuolar iron transporter (VIT) family protein 822112 At3g25190 96.93 PKS4 phytochrome kinase substrate 4 830297 At5g04190 96.33 BBX27 B-box zinc finger family protein 843148 At1g68190 96.24 HFR1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 839300 At1g02340 96.17 MAP18 microtubule-associated protein 18 834489 At5g44610 95.70 PER64 Peroxidase superfamily protein 834223 At5g42180 94.48 PP2-A13 phloem protein 2-A13 825278 At3g61060 93.66 AT5G46890 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834734 At5g46890 93.57 AT5G46900 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834735 At5g46900 93.41 AT3G06390 Uncharacterized protein family (UPF0497) 819813 At3g06390 93.25 scpl2 serine carboxypeptidase-like 2 843664 At1g73300 93.21 AT5G45310 coiled-coil protein 834567 At5g45310 93.16 GLTP2 glycolipid transfer protein 2 838735 At1g21360 92.76 AT4G29905 uncharacterized protein 829113 At4g29905 92.70 FLS5 flavonol synthase 5 836480 At5g63600 92.45 AT2G15880 Leucine-rich repeat (LRR) family protein 816084 At2g15880 92.19 AT4G38932 10723029 At4g38932 91.83 AT3G25930 Adenine nucleotide alpha hydrolases-like superfamily protein 822190 At3g25930 91.77 AT1G70880 Polyketide cyclase/dehydrase and lipid transport superfamily protein 843425 At1g70880 91.48 AT5G16410 HXXXD-type acyl-transferase family protein 831502 At5g16410 91.46 AT3G48390 MA3 domain-containing protein 823997 At3g48390 90.68 AT1G27670 uncharacterized protein 839659 At1g27670 90.32 AT4G06534 uncharacterized protein 826005 At4g06534 89.79 BT2 BTB and TAZ domain protein 2 823994 At3g48360 89.51 AT1G54740 FANTASTIC four-like protein (DUF3049) 841915 At1g54740 89.22 CIPK16 CBL-interacting protein kinase 16 817047 At2g25090 89.10 J8 Chaperone DnaJ-domain superfamily protein 844432 At1g80920 88.94 AT4G06536 SPla/RYanodine receptor (SPRY) domain-containing protein 826007 At4g06536 88.69 AT1G50290 uncharacterized protein 841451 At1g50290 88.57 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein 834449 At5g44260 88.55 CASP1 Uncharacterized protein family (UPF0497) 818183 At2g36100 88.53 AT1G80440 Galactose oxidase/kelch repeat superfamily protein 844383 At1g80440 87.98 AT3G01260 Galactose mutarotase-like superfamily protein 821171 At3g01260 87.58 AT5G64100 Peroxidase superfamily protein 836531 At5g64100 87.05 AT1G19900 glyoxal oxidase-related protein 838578 At1g19900 86.85 AT2G15960 stress-induced protein 816091 At2g15960 86.64 AT1G06473 28716502 AT1G06473 86.44 PIF4 phytochrome interacting factor 4 818903 At2g43010 86.40 AT5G59080 uncharacterized protein 836025 At5g59080 86.02 AT1G11175 6241237 At1g11175 86.01 CASP5 Uncharacterized protein family (UPF0497) 831381 At5g15290 85.92 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 832356 At5g22920 85.90 LHCB4.2 light harvesting complex photosystem II 820043 At3g08940 85.77 UCC1 uclacyanin 1 817791 At2g32300 85.71 CLE2 CLAVATA3/ESR-related 2 827583 At4g18510 85.65 CASP3 Uncharacterized protein family (UPF0497) 817280 At2g27370 85.57	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT2G33830 Dormancy/auxin associated family protein 817950 At2g33830 137.30 AT4G33980 uncharacterized protein 829544 At4g33980 124.08 COR27 cold regulated protein 27 834301 At5g42900 120.90 AT2G15880 Leucine-rich repeat (LRR) family protein 816084 At2g15880 116.25 DYL1 dormancy-associated protein-like 1 839729 At1g28330 114.59 MEE14 maternal effect embryo arrest 14 816085 At2g15890 110.47 BCAT-2 branched-chain amino acid transaminase 2 837543 At1g10070 109.74 AT1G19530 DNA polymerase epsilon catalytic subunit A 838540 At1g19530 109.21 AT3G15450 aluminum induced protein with YGL and LRDR motifs 820784 At3g15450 107.77 AT1G17665 CA-responsive protein 838343 At1g17665 102.59 SEN1 Rhodanese/Cell cycle control phosphatase superfamily protein 829730 At4g35770 101.62 AT1G15330 Cystathionine beta-synthase (CBS) protein 838102 At1g15330 97.88 BT2 BTB and TAZ domain protein 2 823994 At3g48360 96.33 FKF1 flavin-binding, kelch repeat, f box 1 843133 At1g68050 96.16 AT5G03615 28720572 AT5G03615 96.08 JMJD5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 821629 At3g20810 94.74 ASN1 glutamine-dependent asparagine synthase 1 823888 At3g47340 94.17 GRP7 cold, circadian rhythm, and rna binding 2 816705 At2g21660 93.19 COL9 CONSTANS-like 9 819956 At3g07650 90.52 WCRKC1 WCRKC thioredoxin 1 830558 At5g06690 89.72 PRR3 pseudo-response regulator 3 836132 At5g60100 88.92 RTFL21 ROTUNDIFOLIA like 21 5007837 At1g67265 85.98 AT3G15630 plant/protein 820805 At3g15630 85.96 DIN10 Raffinose synthase family protein 832147 At5g20250 85.61 BOA Homeodomain-like superfamily protein 836076 At5g59570 85.19 AT2G15960 stress-induced protein 816091 At2g15960 84.48 AT4G25580 CAP160 protein 828663 At4g25580 84.33 RIBA2 riboflavin biosynthesis protein 816777 At2g22450 83.80 AT3G48390 MA3 domain-containing protein 823997 At3g48390 83.57 MIOX2 myo-inositol oxygenase 2 816499 At2g19800 83.12 THA1 threonine aldolase 1 837385 At1g08630 81.95 AT1G33055 uncharacterized protein 840201 At1g33055 80.59 AT1G19540 NmrA-like negative transcriptional regulator family protein 838541 At1g19540 79.72 CCL CCR-like protein 822286 At3g26740 78.44 AT2G42170 Actin family protein 818817 At2g42170 77.05 AT3G10020 plant/protein 820163 At3g10020 75.39 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein 834449 At5g44260 74.47 AT3G43850 uncharacterized protein 823498 At3g43850 74.12 AT3G51400 hypothetical protein (DUF241) 824303 At3g51400 73.43 AT5G66052 uncharacterized protein 836736 At5g66052 71.91 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 832356 At5g22920 71.88 AT4G27450 aluminum induced protein with YGL and LRDR motifs 828854 At4g27450 71.54 PRR5 two-component response regulator-like protein 832518 At5g24470 71.27 STP14 sugar transporter 14 844057 At1g77210 71.16 CBSX5 Cystathionine beta-synthase (CBS) family protein 828855 At4g27460 69.71 AT1G11175 6241237 At1g11175 69.52 AT5G14920 Gibberellin-regulated family protein 831344 At5g14920 69.18 PCL1 Homeodomain-like superfamily protein 823817 At3g46640 69.11 AT1G09460 Carbohydrate-binding X8 domain superfamily protein 837469 At1g09460 68.02 AT5G18540 E3 ubiquitin-protein ligase 831972 At5g18540 68.02 MCCA methylcrotonyl-CoA carboxylase alpha chain 838362 At1g03090 67.44 AT5G57655 xylose isomerase family protein 835871 At5g57655 67.40 AT5G14470 GHMP kinase family protein 831298 At5g14470 67.31 AT1G76590 PLATZ transcription factor family protein 843992 At1g76590 67.09 AT1G36060 Integrase-type DNA-binding superfamily protein 840510 At1g36060 66.90 DREB2C Integrase-type DNA-binding superfamily protein 818627 At2g40340 66.48 UVR3 DNA photolyase family protein 820804 At3g15620 66.44 AT1G56300 Chaperone DnaJ-domain superfamily protein 842083 At1g56300 66.01 AT4G14270 polyadenylate-binding protein interacting protein 827068 At4g14270 65.98 ACHT5 atypical CYS HIS rich thioredoxin 5 836265 At5g61440 65.71 PAR1 phy rapidly regulated 1 818887 At2g42870 65.37 Fes1B Fes1B 824547 At3g53800 64.70 MPL1 Myzus persicae-induced lipase 1 831268 At5g14180 64.59 AT4G38932 10723029 At4g38932 64.57 GLYI7 Lactoylglutathione lyase / glyoxalase I family protein 844356 At1g80160 64.44 ABCG15 ABC-2 type transporter family protein 821661 At3g21090 64.32 AT1G12790 DNA ligase-like protein 837835 At1g12790 64.30 AT1G15840 uncharacterized protein 838154 At1g15840 64.19 MLS malate synthase 831690 At5g03860 63.82 GLYI4 Lactoylglutathione lyase / glyoxalase I family protein 838107 At1g15380 63.73 UMAMIT33 nodulin MtN21 /EamA-like transporter family protein 828919 At4g28040 63.25 ATL8 RING/U-box superfamily protein 843974 At1g76410 63.09 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily protein 825429 At3g62550 63.07 AT4G26670 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 828774 At4g26670 63.04 AT4G14905 Galactose oxidase/kelch repeat superfamily protein 827148 At4g14905 63.03 AT4G31620 Transcriptional factor B3 family protein 829290 At4g31620 63.03 ELF3 hydroxyproline-rich glycoprotein family protein 817134 At2g25930 62.97 AT1G26665 Mediator complex, subunit Med10 839207 At1g26665 62.77 BGAL10 beta-galactosidase 10 836501 At5g63810 62.62 AT1G23960 hypothetical protein (DUF626) 839007 At1g23960 62.49 ABI5 Basic-leucine zipper (bZIP) transcription factor family protein 818199 At2g36270 62.43 DIN4 Transketolase family protein 820547 At3g13450 62.42 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 825272 At3g61010 62.25 BGAL4 beta-galactosidase 4 835789 At5g56870 61.91 AT3G18535 tubulin-tyrosine ligase 5008009 At3g18535 61.51 AT5G49645 uncharacterized protein 31370887 AT5G49645 61.43 AT3G47160 RING/U-box superfamily protein 823869 At3g47160 61.35 RMA1 RING membrane-anchor 1 825654 At4g03510 61.11 TOC1 CCT motif -containing response regulator protein 836259 At5g61380 60.74 AT5G25210 uncharacterized protein 832592 At5g25210 60.67 AKINBETA1 5'-AMP-activated protein kinase beta-2 subunit protein 832243 At5g21170 60.57 SNRK2.9 SNF1-related protein kinase 2.9 816833 At2g23030 60.55 AT3G47800 Galactose mutarotase-like superfamily protein 823934 At3g47800 60.47 WRI4 Integrase-type DNA-binding superfamily protein 844309 At1g79700 60.44 AT1G56220 Dormancy/auxin associated family protein 842075 At1g56220 60.25 AT5G49440 uncharacterized protein 835004 At5g49440 60.21 AT3G20340 protein expression protein 821578 At3g20340 60.07 AT4G07825 uncharacterized protein 826264 At4g07825 59.80 AT3G61198 5008103 At3g61198 59.68 ETR2 Signal transduction histidine kinase, hybrid-type, ethylene sensor 821891 At3g23150 59.26	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT5G44585 uncharacterized protein 6241037 At5g44585 123.12 AT5G03355 cysteine/histidine-rich C1 domain protein 28720553 AT5G03355 118.54 PP2-A5 phloem protein 2 A5 842851 At1g65390 117.72 MC2 metacaspase 2 828614 At4g25110 111.15 AT2G25735 uncharacterized protein 817115 At2g25735 110.66 HR3 homolog of RPW8 3 824211 At3g50470 109.53 AT5G59680 Leucine-rich repeat protein kinase family protein 836089 At5g59680 109.06 AT3G04210 Disease resistance protein (TIR-NBS class) 819576 At3g04210 107.82 AT5G28630 glycine-rich protein 832966 At5g28630 107.62 AT4G18253 receptor Serine/Threonine kinase-like protein 28720145 AT4G18253 106.66 AT4G18250 receptor Serine/Threonine kinase-like protein 827551 At4g18250 105.42 AT5G54720 Ankyrin repeat family protein 835561 At5g54720 104.83 CRK30 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 826751 At4g11460 104.78 PP2-B14 phloem protein 2-B14 842078 At1g56250 104.42 AT3G07195 RPM1-interacting protein 4 (RIN4) family protein 819907 At3g07195 104.35 AT3G50140 transmembrane protein, putative (DUF247) 824176 At3g50140 104.19 BG3 beta-1,3-glucanase 3 824891 At3g57240 103.65 PYL6 PYR1-like 6 818626 At2g40330 103.52 AT5G54710 Ankyrin repeat family protein 835560 At5g54710 102.98 CYP81F2 cytochrome P450, family 81, subfamily F, polypeptide 2 835828 At5g57220 102.89 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 818916 At2g43140 102.10 AT3G23550 MATE efflux family protein 821934 At3g23550 101.73 AT5G48430 Eukaryotic aspartyl protease family protein 834898 At5g48430 100.46 AT5G28610 LOW protein: ATP-dependent RNA helicase DRS1-like protein 832960 At5g28610 99.01 AT2G44370 Cysteine/Histidine-rich C1 domain family protein 819044 At2g44370 98.47 AT1G10340 Ankyrin repeat family protein 837573 At1g10340 97.22 AT4G11000 Ankyrin repeat family protein 826701 At4g11000 96.57 AT1G66940 kinase-like protein 843012 At1g66940 96.16 HR4 homolog of RPW8 4 824212 At3g50480 95.24 AT4G15975 RING/U-box superfamily protein 827281 At4g15975 95.21 AT5G39580 Peroxidase superfamily protein 833954 At5g39580 94.98 AT5G44568 uncharacterized protein 5008297 At5g44568 93.28 CRK4 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 823729 At3g45860 93.15 PER4 Peroxidase superfamily protein 838016 At1g14540 93.08 AT1G51850 Leucine-rich repeat protein kinase family protein 841612 At1g51850 92.28 AT5G56960 basic helix-loop-helix (bHLH) DNA-binding family protein 835798 At5g56960 91.76 AT4G03450 Ankyrin repeat family protein 827913 At4g03450 91.49 AT5G25260 SPFH/Band 7/PHB domain-containing membrane-associated protein family 832597 At5g25260 91.14 AT3G46280 kinase-like protein 823773 At3g46280 91.06 Prx37 Peroxidase superfamily protein 826447 At4g08770 91.01 AT3G48640 uncharacterized protein 824024 At3g48640 90.87 AT2G24600 Ankyrin repeat family protein 816996 At2g24600 90.80 CYP71B22 cytochrome P450, family 71, subfamily B, polypeptide 22 822221 At3g26200 90.52 AT1G51790 Leucine-rich repeat protein kinase family protein 841605 At1g51790 90.46 DLAH alpha/beta-Hydrolases superfamily protein 839917 At1g30370 90.41 PCR1 PLANT CADMIUM RESISTANCE 1 838053 At1g14880 90.38 CRK31 cysteine-rich RLK (RECEPTOR-like protein kinase) 31 826752 At4g11470 90.27 IOS1 Leucine-rich repeat protein kinase family protein 841606 At1g51800 89.52 ZAT11 C2H2 and C2HC zinc fingers superfamily protein 818319 At2g37430 89.04 AT5G05300 uncharacterized protein 28720712 At5g05300 89.02 AT1G33760 Integrase-type DNA-binding superfamily protein 840267 At1g33760 89.00 AT2G15042 Leucine-rich repeat (LRR) family protein 7922469 At2g15042 88.94 AT1G15125 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 838076 At1g15125 88.81 AT3G00850 28718433 AT3G00850 88.35 IGMT2 O-methyltransferase family protein 838708 At1g21120 87.52 AT1G51270 vesicle-associated protein 1-4 841550 At1g51270 87.51 XBAT34 uncharacterized protein 827080 At4g14365 87.42 MDHAR monodehydroascorbate reductase 820155 At3g09940 87.41 PLA2A phospholipase A 2A 817197 At2g26560 87.12 FLOT1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 832596 At5g25250 87.03 HIR2 SPFH/Band 7/PHB domain-containing membrane-associated protein family 821309 At3g01290 86.59 AT1G05675 UDP-Glycosyltransferase superfamily protein 10723139 At1g05675 86.57 AT2G04495 uncharacterized protein 814990 At2g04495 86.41 AT1G27020 plant/protein 839591 At1g27020 86.04 AT2G27660 Cysteine/Histidine-rich C1 domain family protein 817312 At2g27660 85.59 AT5G51465 uncharacterized protein 28721262 AT5G51465 85.19 AT5G22520 uncharacterized protein 832313 At5g22520 85.03 AT1G66930 Protein kinase superfamily protein 843011 At1g66930 84.88 AT1G13470 hypothetical protein (DUF1262) 837907 At1g13470 84.76 ACS11 1-aminocyclopropane-1-carboxylate synthase 11 826317 At4g08040 84.76 PCC1 pathogen and circadian controlled 1 821788 At3g22231 84.75 AACT1 anthocyanin 5-aromatic acyltransferase 1 836237 At5g61160 84.22 WRKY54 WRKY DNA-binding protein 54 818670 At2g40750 83.82 TCH3 Calcium-binding EF hand family protein 818709 At2g41100 83.72 RGXT2 rhamnogalacturonan xylosyltransferase 2 827905 At4g01750 83.24 AT5G39020 Malectin/receptor-like protein kinase family protein 833894 At5g39020 83.09 AT1G52200 PLAC8 family protein 841650 At1g52200 82.92 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 818241 At2g36690 82.72 AT1G33610 Leucine-rich repeat (LRR) family protein 840255 At1g33610 82.56 AT5G64100 Peroxidase superfamily protein 836531 At5g64100 82.25 IGMT3 O-methyltransferase family protein 838707 At1g21110 82.22 AT5G52760 Copper transport protein family 835353 At5g52760 82.05 WAK2 wall-associated kinase 2 838723 At1g21270 81.82 AT3G50010 Cysteine/Histidine-rich C1 domain family protein 824163 At3g50010 81.68 WRKY72 WRKY DNA-binding protein 72 831365 At5g15130 81.59 AT1G51890 Leucine-rich repeat protein kinase family protein 841616 At1g51890 81.39 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family 826718 At4g11170 81.01 PMT6 Major facilitator superfamily protein 829820 At4g36670 80.74 AT1G51620 Protein kinase superfamily protein 841587 At1g51620 80.72 AT1G30730 FAD-binding Berberine family protein 839953 At1g30730 80.57 ACD6 ankyrin repeat family protein 827085 At4g14400 80.40 AT2G39530 Uncharacterized protein family (UPF0497) 818538 At2g39530 80.37 AT3G50190 transmembrane protein, putative (DUF247) 824181 At3g50190 80.26 AT1G66090 Disease resistance protein (TIR-NBS class) 842923 At1g66090 80.15 AT5G45000 Disease resistance protein (TIR-NBS-LRR class) family 834531 At5g45000 80.05 ERF6 ethylene responsive element binding factor 6 827463 At4g17490 80.03 AT1G78860 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein 844223 At1g78860 79.90 AT1G02360 Chitinase family protein 837724 At1g02360 79.89 IGMT4 O-methyltransferase family protein 838709 At1g21130 79.71 CRK5 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 828412 At4g23130 79.63	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT3G28510 P-loop containing nucleoside triphosphate hydrolases superfamily protein 822481 At3g28510 95.40 ANK ankyrin 835550 At5g54610 94.94 LURP1 LURP-one-like protein (DUF567) 815943 At2g14560 94.40 ACD6 ankyrin repeat family protein 827085 At4g14400 92.57 AT5G59680 Leucine-rich repeat protein kinase family protein 836089 At5g59680 91.70 AT2G25510 uncharacterized protein 817089 At2g25510 89.01 AT4G14390 Ankyrin repeat family protein 827084 At4g14390 88.89 PCR1 PLANT CADMIUM RESISTANCE 1 838053 At1g14880 87.71 PR1 pathogenesis-related protein 1 815949 At2g14610 86.62 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 820564 At3g13610 81.58 CYP71B36 cytochrome P450, family 71, subfamily B, polypeptide 36 822236 At3g26320 80.49 EARLI1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826860 At4g12480 79.82 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826862 At4g12500 78.65 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826861 At4g12490 77.11 AT1G51890 Leucine-rich repeat protein kinase family protein 841616 At1g51890 75.86 ECS1 ECS1 840047 At1g31580 74.90 AT1G51860 Leucine-rich repeat protein kinase family protein 841613 At1g51860 74.45 AT2G44380 Cysteine/Histidine-rich C1 domain family protein 819045 At2g44380 71.65 COPT2 copper transporter 2 823843 At3g46900 70.06 cwINV6 6-&1-fructan exohydrolase 831065 At5g11920 69.54 AT5G42530 uncharacterized protein 834260 At5g42530 69.50 PHT1;1 phosphate transporter 1;1 834353 At5g43350 69.35 AT4G00955 wall-associated receptor kinase-like protein 827942 At4g00955 68.96 MC2 metacaspase 2 828614 At4g25110 68.33 AT4G16260 Glycosyl hydrolase superfamily protein 827320 At4g16260 67.69 AT1G26390 FAD-binding Berberine family protein 839181 At1g26390 67.06 AT3G28540 P-loop containing nucleoside triphosphate hydrolases superfamily protein 822484 At3g28540 66.84 AT5G26690 Heavy metal transport/detoxification superfamily protein 832720 At5g26690 66.75 AT3G48080 alpha/beta-Hydrolases superfamily protein 823963 At3g48080 66.56 AT3G22240 cysteine-rich/transmembrane domain PCC1-like protein 821794 At3g22240 66.03 DUR3 urea-proton symporter DEGRADATION OF UREA 3 (DUR3) 834574 At5g45380 65.80 CYP71B23 cytochrome P450, family 71, subfamily B, polypeptide 23 822222 At3g26210 65.34 PCC1 pathogen and circadian controlled 1 821788 At3g22231 65.20 AT5G24200 alpha/beta-Hydrolases superfamily protein 832487 At5g24200 65.15 AT2G15020 uncharacterized protein 815991 At2g15020 64.33 NAS1 nicotianamine synthase 1 830377 At5g04950 64.32 AT1G56120 Leucine-rich repeat transmembrane protein kinase 842064 At1g56120 63.47 CYP71B24 cytochrome P450, family 71, subfamily B, polypeptide 24 822224 At3g26230 63.35 IMS2 2-isopropylmalate synthase 2 832366 At5g23020 63.30 ATOBGM GTP-binding protein Obg/CgtA 837275 At1g07620 63.12 FMO1 flavin-dependent monooxygenase 1 838508 At1g19250 62.99 AT4G10500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 826642 At4g10500 62.33 CNGC11 cyclic nucleotide-gated channels 819252 At2g46440 62.09 CRK4 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 823729 At3g45860 61.91 MYB48 myb domain protein 48 823756 At3g46130 61.43 AT1G69730 Wall-associated kinase family protein 843309 At1g69730 61.37 XTH31 xyloglucan endo-transglycosylase-related 8 823634 At3g44990 60.17 UGT72E2 UDP-Glycosyltransferase superfamily protein 836802 At5g66690 59.93 AT4G01915 uncharacterized protein 2745599 At4g01915 59.74 AT3G15536 7922447 At3g15536 59.68 AT3G61280 O-glucosyltransferase rumi-like protein (DUF821) 825300 At3g61280 59.63 WRKY60 WRKY DNA-binding protein 60 817039 At2g25000 59.34 scpl16 serine carboxypeptidase-like 16 820402 At3g12220 59.17 CYP72A14 cytochrome P450, family 72, subfamily A, polypeptide 14 820696 At3g14680 59.14 AT1G13830 Carbohydrate-binding X8 domain superfamily protein 837944 At1g13830 59.00 RK2 receptor kinase 2 842891 At1g65800 58.87 AT5G36930 Disease resistance protein (TIR-NBS-LRR class) family 833662 At5g36930 58.80 FRO7 ferric reduction oxidase 7 835037 At5g49740 58.46 LUP5 Terpenoid cyclases family protein 843014 At1g66960 58.35 AT3G18320 F-box and associated interaction domains-containing protein 821361 At3g18320 58.27 AT5G59670 Leucine-rich repeat protein kinase family protein 836088 At5g59670 58.16 AT3G01335 28718477 AT3G01335 57.89 CSA1 disease resistance protein (TIR-NBS-LRR class) 831656 At5g17880 57.84 EXT3 extensin 3 838728 At1g21310 57.73 AT1G19960 transcription factor 838585 At1g19960 57.72 PP2-A6 phloem protein 2-A6 834539 At5g45080 57.33 NUDT6 nudix hydrolase homolog 6 814985 At2g04450 57.32 AT3G12977 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 3768816 At3g12977 57.25 CSLB04 cellulose synthase-like B4 817815 At2g32540 57.21 AT3G22235 cysteine-rich TM module stress tolerance protein 821791 At3g22235 57.15 RTL1 RNAse II-like 1 827212 At4g15417 56.99 CNGC12 cyclic nucleotide-gated channel 12 819253 At2g46450 56.96 AT5G38980 uncharacterized protein 833890 At5g38980 56.93 AT3G47480 Calcium-binding EF-hand family protein 823902 At3g47480 56.85 ALD1 AGD2-like defense response protein 1 815864 At2g13810 56.84 MIR163 3767649 At1g66725 56.77 AT3G51350 Eukaryotic aspartyl protease family protein 824298 At3g51350 56.59 AT5G45000 Disease resistance protein (TIR-NBS-LRR class) family 834531 At5g45000 56.37 AT3G51330 Eukaryotic aspartyl protease family protein 824296 At3g51330 56.26 RLP38 receptor like protein 38 821887 At3g23120 56.08 AT5G48290 Heavy metal transport/detoxification superfamily protein 834882 At5g48290 56.01 PHT1;2 phosphate transporter 2 834355 At5g43370 55.99 VSR7 VACUOLAR SORTING RECEPTOR 7 827757 At4g20110 55.98 AT5G10760 Eukaryotic aspartyl protease family protein 830943 At5g10760 55.98 AMT1;2 ammonium transporter 1;2 842786 At1g64780 55.95 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 828031 At4g00700 55.35 AT5G09290 Inositol monophosphatase family protein 830788 At5g09290 55.18 AT5G38900 Thioredoxin superfamily protein 833882 At5g38900 54.89 AT1G26410 FAD-binding Berberine family protein 839183 At1g26410 54.52 RLP7 receptor like protein 7 841206 At1g47890 54.50 AIG1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 840293 At1g33960 54.46 RPS5 Disease resistance protein (CC-NBS-LRR class) family 837775 At1g12220 54.30 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 826263 At4g07820 54.23 NRT1.5 nitrate transporter 1.5 840139 At1g32450 54.14 AT1G49470 transmembrane epididymal protein (DUF716) 841370 At1g49470 53.90 WRKY58 WRKY DNA-binding protein 58 821213 At3g01080 53.86 UGT73D1 UDP-glucosyl transferase 73D1 824481 At3g53150 53.54 AT5G46260 disease resistance protein (TIR-NBS-LRR class) family 834668 At5g46260 53.52 AT2G36970 UDP-Glycosyltransferase superfamily protein 818271 At2g36970 53.49 AT4G21903 MATE efflux family protein 6241480 At4g21903 53.46	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC FKF1 flavin-binding, kelch repeat, f box 1 843133 At1g68050 138.35 AT5G23240 DNAJ heat shock N-terminal domain-containing protein 832388 At5g23240 135.57 AT14A transmembrane protein, putative (DUF677) 822455 At3g28290 133.85 AT14A transmembrane protein, putative (DUF677) 822457 At3g28300 133.33 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily protein 825429 At3g62550 128.85 AT2G39920 HAD superfamily, subfamily IIIB acid phosphatase 818579 At2g39920 126.00 AT1G07050 CCT motif family protein 837216 At1g07050 123.36 COR15B cold regulated 15b 818853 At2g42530 121.28 IGMT5 O-methyltransferase family protein 844013 At1g76790 114.88 PRR3 pseudo-response regulator 3 836132 At5g60100 111.95 AT4G30650 Low temperature and salt responsive protein family 829188 At4g30650 110.92 LOX2 lipoxygenase 2 823650 At3g45140 108.77 DREB1A dehydration response element B1A 828652 At4g25480 107.40 VSP2 vegetative storage protein 2 832546 At5g24770 106.76 TPS03 terpene synthase 03 827377 At4g16740 106.12 CORI3 Tyrosine transaminase family protein 828460 At4g23600 104.58 MBP1 myrosinase-binding protein 1 841633 At1g52040 104.33 NATA1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 818489 At2g39030 104.25 AT1G70820 phosphoglucomutase, putative / glucose phosphomutase 843419 At1g70820 103.82 AT1G76960 uncharacterized protein 844031 At1g76960 101.92 CCL CCR-like protein 822286 At3g26740 100.98 AT4G16146 cAMP-regulated phosphoprotein 19-related protein 827304 At4g16146 100.93 AT5G10760 Eukaryotic aspartyl protease family protein 830943 At5g10760 99.00 BG3 beta-1,3-glucanase 3 824891 At3g57240 98.52 VSP1 vegetative storage protein 1 832547 At5g24780 98.41 AT1G76955 uncharacterized protein 2745854 At1g76955 95.93 AOC2 allene oxide cyclase 2 822168 At3g25770 95.59 RbcX1 Chaperonin-like RbcX protein 825753 At4g04330 95.41 COR15A cold-regulated 15a 818854 At2g42540 94.62 LURP1 LURP-one-like protein (DUF567) 815943 At2g14560 94.38 AT1G68600 aluminum activated malate transporter family protein 843190 At1g68600 94.33 MBP2 myrosinase-binding protein 2 841632 At1g52030 93.79 COR413IM1 COLD REGULATED 314 INNER MEMBRANE 1 839815 At1g29395 92.42 AT3G51400 hypothetical protein (DUF241) 824303 At3g51400 91.80 GRP7 cold, circadian rhythm, and rna binding 2 816705 At2g21660 91.47 AT4G12900 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein 826902 At4g12900 91.45 ELF4 EARLY FLOWERING-like protein (DUF1313) 818596 At2g40080 91.40 BAM5 beta-amylase 5 827185 At4g15210 90.84 AT4G30660 Low temperature and salt responsive protein family 829189 At4g30660 90.39 BGLU18 beta glucosidase 18 841670 At1g52400 89.51 AT4G33980 uncharacterized protein 829544 At4g33980 89.31 PUP1 purine permease 1 839717 At1g28230 88.31 AT3G50120 transmembrane protein, putative (DUF247) 824174 At3g50120 88.00 AT5G11610 Exostosin family protein 831033 At5g11610 87.49 BGL2 beta-1,3-glucanase 2 824893 At3g57260 87.00 AT1G14250 GDA1/CD39 nucleoside phosphatase family protein 837986 At1g14250 86.98 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 828207 At4g01130 86.94 AT1G56300 Chaperone DnaJ-domain superfamily protein 842083 At1g56300 86.07 AT3G61280 O-glucosyltransferase rumi-like protein (DUF821) 825300 At3g61280 85.66 AT1G31690 Copper amine oxidase family protein 840056 At1g31690 85.43 AT1G11210 cotton fiber protein, putative (DUF761) 837662 At1g11210 85.29 BGLU44 B-S glucosidase 44 821333 At3g18080 84.43 AT2G43550 scorpion toxin-like knottin superfamily protein 818957 At2g43550 82.71 JAL23 jacalin-related lectin 23 818518 At2g39330 82.10 PR1 pathogenesis-related protein 1 815949 At2g14610 81.99 PORB protochlorophyllide oxidoreductase B 828853 At4g27440 81.96 ISA3 isoamylase 3 826481 At4g09020 81.42 PCR1 PLANT CADMIUM RESISTANCE 1 838053 At1g14880 81.37 PCC1 pathogen and circadian controlled 1 821788 At3g22231 81.36 LTP4 lipid transfer protein 4 836050 At5g59310 81.35 AT4G17470 alpha/beta-Hydrolases superfamily protein 827458 At4g17470 80.30 RTFL21 ROTUNDIFOLIA like 21 5007837 At1g67265 79.85 PRR5 two-component response regulator-like protein 832518 At5g24470 79.84 AT5G62360 Plant invertase/pectin methylesterase inhibitor superfamily protein 836357 At5g62360 79.80 PHS2 alpha-glucan phosphorylase 2 823850 At3g46970 78.83 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 834364 At5g43440 78.10 CYP79F1 cytochrome p450 79f1 838211 At1g16410 78.02 NUDT8 nudix hydrolase homolog 8 834771 At5g47240 76.96 COR27 cold regulated protein 27 834301 At5g42900 76.91 AT1G52000 Mannose-binding lectin superfamily protein 841629 At1g52000 76.49 AT1G17665 CA-responsive protein 838343 At1g17665 76.43 TAT3 tyrosine aminotransferase 3 817022 At2g24850 76.02 CHX16 cation/H+ exchanger 16 842721 At1g64170 75.85 AT1G54020 GDSL-like Lipase/Acylhydrolase superfamily protein 841840 At1g54020 75.68 AT2G03310 uncharacterized protein 814860 At2g03310 74.56 AT2G04080 MATE efflux family protein 814944 At2g04080 74.47 AT5G61520 Major facilitator superfamily protein 836273 At5g61520 74.15 PIFI post-illumination chlorophyll fluorescence increase 820827 At3g15840 73.55 AT1G53035 uncharacterized protein 841737 At1g53035 73.42 AT1G08890 Major facilitator superfamily protein 837410 At1g08890 73.01 AT2G38465 uncharacterized protein 818428 At2g38465 72.93 FRO8 ferric reduction oxidase 8 835081 At5g50160 72.24 AT2G43530 scorpion toxin-like knottin superfamily protein 818954 At2g43530 72.04 NUDT24 nudix hydrolase homolog 24 832067 At5g19470 71.81 AT1G19960 transcription factor 838585 At1g19960 71.79 AT4G12290 Copper amine oxidase family protein 826838 At4g12290 71.47 TSA1 TSK-associating protein 1 841671 At1g52410 71.39 AT1G53903 linoleate 9S-lipoxygenase-4 protein, putative (DUF581) 6241094 At1g53903 70.55 AT1G53885 linoleate 9S-lipoxygenase-4 protein, putative (DUF581) 841826 At1g53885 70.51 AT4G32340 Tetratricopeptide repeat (TPR)-like superfamily protein 829368 At4g32340 70.35 ESP epithiospecifier protein 841842 At1g54040 70.28 CSLG2 cellulose synthase like G2 828500 At4g24000 70.09 AT1G77520 O-methyltransferase family protein 844088 At1g77520 70.05 RK1 receptor kinase 1 842890 At1g65790 69.83 SEX4 dual specificity protein phosphatase (DsPTP1) family protein 824383 At3g52180 69.74 MIR167d 28717283 At1g31173 69.43 TPS04 terpene synthase 04 842405 At1g61120 69.22 OEP16-1 outer plastid envelope protein 16-1 817439 At2g28900 69.19 AT2G04066 MATE efflux family protein 814942 At2g04066 69.18 AT5G61290 Flavin-binding monooxygenase family protein 836250 At5g61290 69.06	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT5G46510 Disease resistance protein (TIR-NBS-LRR class) family 834694 At5g46510 71.92 AT5G28400 embryo defective protein 832925 At5g28400 64.18 AT5G28320 embryo defective protein 832916 At5g28320 61.28 AT5G41550 Disease resistance protein (TIR-NBS-LRR class) family 834157 At5g41550 58.98 AT5G54720 Ankyrin repeat family protein 835561 At5g54720 57.36 WAVE5 SCAR family protein 827594 At4g18600 55.53 AT1G72840 Disease resistance protein (TIR-NBS-LRR class) 843615 At1g72840 53.34 AT1G50745 plant mobile domain protein 28717343 AT1G50745 52.28 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 825272 At3g61010 52.00 AT2G11225 uncharacterized protein 28718249 AT2G11225 51.96 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family 842107 At1g56540 51.89 AT4G21650 Subtilase family protein 828252 At4g21650 51.62 AT5G51630 Disease resistance protein (TIR-NBS-LRR class) family 835237 At5g51630 51.30 AT4G16960 disease resistance protein (TIR-NBS-LRR class) 827404 At4g16960 51.07 AT5G22794 uncharacterized protein 6241095 At5g22794 50.79 RLP34 receptor like protein 34 820272 At3g11010 50.09 CRK6 cysteine-rich RLK (RECEPTOR-like protein kinase) 6 828413 At4g23140 49.80 AT4G02660 Beige/BEACH and WD40 domain-containing protein 828210 At4g02660 49.45 POK2 phragmoplast orienting kinesin 2 821439 At3g19050 49.43 RLP38 receptor like protein 38 821887 At3g23120 49.19 AT3G14460 LRR and NB-ARC domains-containing disease resistance protein 820669 At3g14460 48.28 AT3G48770 ATP/DNA binding protein 824038 At3g48770 48.21 WRR4 Disease resistance protein (TIR-NBS-LRR class) 842104 At1g56510 47.93 EOL2 ETO1-like 2 835968 At5g58550 47.60 AT5G41750 Disease resistance protein (TIR-NBS-LRR class) family 834178 At5g41750 47.47 AT5G46520 Disease resistance protein (TIR-NBS-LRR class) family 834695 At5g46520 47.42 AT2G11215 uncharacterized protein 28718248 AT2G11215 47.41 HAC4 histone acetyltransferase of the CBP family 4 842048 At1g55970 47.30 AT4G01740 Cysteine/Histidine-rich C1 domain family protein 828012 At4g01740 46.84 AT4G36140 disease resistance protein (TIR-NBS-LRR class) 829771 At4g36140 46.40 DAR4 DA1-related protein 4 831657 At5g17890 46.03 LYK5 Protein kinase superfamily protein 817923 At2g33580 45.90 AT3G24715 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 822069 At3g24715 45.50 AT1G50750 aminotransferase-like, mobile domain protein 841497 At1g50750 45.27 AT3G25510 disease resistance protein (TIR-NBS-LRR class) family protein 822137 At3g25510 45.26 AT4G19520 disease resistance protein (TIR-NBS-LRR class) family 827694 At4g19520 45.02 AT1G50820 aminotransferase-like, mobile domain protein 841504 At1g50820 44.90 AT2G40130 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein 818604 At2g40130 44.87 GLR2.1 glutamate receptor 2.1 832768 At5g27100 44.87 RLM3 disease resistance protein (TIR-NBS class) 827407 At4g16990 44.72 NET1B kinase interacting (KIP1-like) family protein 827131 At4g14760 44.52 LAC2 laccase 2 817462 At2g29130 44.45 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family 823589 At3g44630 44.38 SEU SEUSS transcriptional co-regulator 840981 At1g43850 44.33 IRX1 cellulose synthase family protein 827612 At4g18780 44.27 AT1G35710 kinase family with leucine-rich repeat domain-containing protein 840475 At1g35710 44.24 AT5G54710 Ankyrin repeat family protein 835560 At5g54710 43.98 AT5G59670 Leucine-rich repeat protein kinase family protein 836088 At5g59670 43.95 AUL1 auxin-like 1 protein 843868 At1g75310 43.92 CRK23 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 828430 At4g23310 43.86 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family 834092 At5g40910 43.70 AT5G59660 Leucine-rich repeat protein kinase family protein 836087 At5g59660 43.50 DUO3 Homeodomain-like superfamily protein 842765 At1g64570 43.25 RLK1 receptor-like protein kinase 1 836211 At5g60900 43.25 AT2G45540 WD-40 repeat family protein / beige-like protein 819162 At2g45540 43.05 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein 817375 At2g28290 42.78 ABCG33 pleiotropic drug resistance 5 818305 At2g37280 42.75 CRK10 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 828417 At4g23180 42.69 RRS1 Disease resistance protein (TIR-NBS-LRR class) 834562 At5g45260 42.60 UPL1 LOW protein: E3 ubiquitin ligase-like protein 842036 At1g55860 42.53 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family 829772 At4g36150 42.48 AT3G44670 Disease resistance protein (TIR-NBS-LRR class) family 823593 At3g44670 42.31 XIA myosin XI A 839480 At1g04600 42.26 RLP41 receptor like protein 41 822092 At3g25010 42.21 LHY Homeodomain-like superfamily protein 839341 At1g01060 42.03 AT5G41740 Disease resistance protein (TIR-NBS-LRR class) family 834177 At5g41740 41.91 AT2G23200 Protein kinase superfamily protein 816852 At2g23200 41.89 RPP1 Disease resistance protein (TIR-NBS-LRR class) family 823573 At3g44480 41.85 AT3G24480 Leucine-rich repeat (LRR) family protein 822038 At3g24480 41.84 AT1G63860 Disease resistance protein (TIR-NBS-LRR class) family 3767624 At1g63860 41.82 RLP32 receptor like protein 32 819732 At3g05650 41.73 WRKY19 protein kinase family protein 826810 At4g12020 41.51 NET1A Kinase interacting (KIP1-like) family protein 821850 At3g22790 41.36 AT4G11000 Ankyrin repeat family protein 826701 At4g11000 41.29 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 832375 At5g23110 41.22 AT1G22060 sporulation-specific protein 838811 At1g22060 41.22 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein 843798 At1g74580 41.16 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein 816303 At2g17930 40.97 DME HhH-GPD base excision DNA repair family protein 830335 At5g04560 40.87 AT5G28390 RNA-binding (RRM/RBD/RNP motifs) family protein 832924 At5g28390 40.69 AT1G63300 Myosin heavy chain-related protein 842636 At1g63300 40.42 CRK14 cysteine-rich RECEPTOR-like kinase 828421 At4g23220 40.40 AT3G48187 Serine/Threonine-kinase ATM 28719387 AT3G48187 40.37 CRK4 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 823729 At3g45860 40.34 AT4G01020 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein 826439 At4g01020 40.14 AAP6 amino acid permease 6 835025 At5g49630 40.12 CSI1 binding protein 816747 At2g22125 40.11 AT1G48090 calcium-dependent lipid-binding family protein 841226 At1g48090 39.97 ABCG35 pleiotropic drug resistance 7 838087 At1g15210 39.93 GSL04 glucan synthase-like 4 820683 At3g14570 39.90 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family 827399 At4g16900 39.89 LOX5 PLAT/LH2 domain-containing lipoxygenase family protein 821808 At3g22400 39.87 CRK8 cysteine-rich RECEPTOR-like kinase 828415 At4g23160 39.80 AT5G22690 Disease resistance protein (TIR-NBS-LRR class) family 832332 At5g22690 39.68 NRT1.9 Major facilitator superfamily protein 838469 At1g18880 39.58 CNGC19 cyclic nucleotide gated channel 19 821036 At3g17690 39.56 RDR1 RNA-dependent RNA polymerase 1 838044 At1g14790 39.56 AT4G16940 Disease resistance protein (TIR-NBS-LRR class) family 827402 At4g16940 39.55 CCR4 CRINKLY4 related 4 834836 At5g47850 39.54 AT1G76740 uncharacterized protein 844008 At1g76740 39.53	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT1G51090 Heavy metal transport/detoxification superfamily protein 841532 At1g51090 86.09 DREB1A dehydration response element B1A 828652 At4g25480 82.84 ELF4 EARLY FLOWERING-like protein (DUF1313) 818596 At2g40080 80.54 GolS3 galactinol synthase 3 837457 At1g09350 77.86 RAS1 RESPONSE TO ABA AND SALT 1 837529 At1g09950 76.82 AT4G30650 Low temperature and salt responsive protein family 829188 At4g30650 76.24 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 829082 At4g29610 75.61 AT1G16850 uncharacterized protein 838256 At1g16850 74.25 AT5G62360 Plant invertase/pectin methylesterase inhibitor superfamily protein 836357 At5g62360 74.15 CBF1 C-repeat/DRE binding factor 1 828653 At4g25490 73.97 AT1G11210 cotton fiber protein, putative (DUF761) 837662 At1g11210 73.47 LTI78 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) 835307 At5g52310 73.26 KIN1 stress-responsive protein (KIN1) / stress-induced protein (KIN1) 831453 At5g15960 72.87 AT4G18422 uncharacterized protein 7922355 At4g18422 72.36 KIN2 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) 831454 At5g15970 71.96 AT4G27654 uncharacterized protein 828878 At4g27654 69.96 FKF1 flavin-binding, kelch repeat, f box 1 843133 At1g68050 69.07 AT5G17460 glutamyl-tRNA (Gln) amidotransferase subunit C 831612 At5g17460 66.30 ERD10 Dehydrin family protein 838633 At1g20450 65.77 COR15A cold-regulated 15a 818854 At2g42540 65.61 COR47 cold-regulated 47 838632 At1g20440 65.61 AT2G38465 uncharacterized protein 818428 At2g38465 64.91 ERD7 Senescence/dehydration-associated protein-like protein 816293 At2g17840 64.83 COR15B cold regulated 15b 818853 At2g42530 64.73 RCI2A Low temperature and salt responsive protein family 819757 At3g05880 61.31 AT1G56300 Chaperone DnaJ-domain superfamily protein 842083 At1g56300 60.76 AT1G70640 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein 843401 At1g70640 60.35 AT5G52020 Integrase-type DNA-binding superfamily protein 835277 At5g52020 60.07 COR413-PM1 cold regulated 413 plasma membrane 1 816092 At2g15970 59.61 AT5G46600 aluminum activated malate transporter family protein 834703 At5g46600 59.40 AT4G36010 Pathogenesis-related thaumatin superfamily protein 829757 At4g36010 59.23 LTI30 dehydrin family protein 824261 At3g50970 59.19 AT4G28140 Integrase-type DNA-binding superfamily protein 828929 At4g28140 58.83 LEA14 Late embryogenesis abundant protein 837071 At1g01470 58.41 RRTF1 redox responsive transcription factor 1 829591 At4g34410 58.21 AT1G72416 Chaperone DnaJ-domain superfamily protein 3767688 At1g72416 57.33 AT4G16563 Eukaryotic aspartyl protease family protein 827356 At4g16563 56.78 EHB1 Calcium-dependent lipid-binding (CaLB domain) family protein 843417 At1g70800 56.25 AT1G08890 Major facilitator superfamily protein 837410 At1g08890 55.71 AT3G50120 transmembrane protein, putative (DUF247) 824174 At3g50120 55.03 AT1G71000 Chaperone DnaJ-domain superfamily protein 843439 At1g71000 55.01 AT3G55940 Phosphoinositide-specific phospholipase C family protein 824760 At3g55940 54.78 PRR5 two-component response regulator-like protein 832518 At5g24470 53.98 EXLA1 expansin-like A1 823740 At3g45970 53.79 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 824011 At3g48520 53.49 AT4G30660 Low temperature and salt responsive protein family 829189 At4g30660 53.38 AT4G04745 uncharacterized protein 825810 At4g04745 52.80 XTH18 xyloglucan endotransglucosylase/hydrolase 18 829151 At4g30280 52.78 NUDT8 nudix hydrolase homolog 8 834771 At5g47240 51.60 AT1G13930 oleosin-B3-like protein 837953 At1g13930 51.24 CBF2 C-repeat/DRE binding factor 2 828651 At4g25470 50.69 AT4G33985 membrane insertase, putative (DUF1685) 829545 At4g33985 50.56 DDF1 Integrase-type DNA-binding superfamily protein 837817 At1g12610 50.42 AT5G38700 cotton fiber protein 833860 At5g38700 50.10 AT1G64380 Integrase-type DNA-binding superfamily protein 842745 At1g64380 50.09 AOC2 allene oxide cyclase 2 822168 At3g25770 49.74 RbcX1 Chaperonin-like RbcX protein 825753 At4g04330 49.71 PCL1 Homeodomain-like superfamily protein 823817 At3g46640 49.60 GRP7 cold, circadian rhythm, and rna binding 2 816705 At2g21660 49.43 IGMT5 O-methyltransferase family protein 844013 At1g76790 48.51 AT4G27652 uncharacterized protein 828877 At4g27652 48.37 DIP2 E3 ubiquitin-protein ligase 831903 At5g03210 48.25 AT1G22470 uncharacterized protein 838853 At1g22470 48.02 AT3G09540 Pectin lyase-like superfamily protein 820111 At3g09540 47.99 OEP16-1 outer plastid envelope protein 16-1 817439 At2g28900 47.95 AT4G35320 uncharacterized protein 829686 At4g35320 47.89 AT5G37550 uncharacterized protein 833733 At5g37550 47.85 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 816273 At2g17660 47.72 AT2G47890 B-box type zinc finger protein with CCT domain-containing protein 819401 At2g47890 47.65 AT4G40065 6240840 At4g40065 47.27 AT3G04010 O-Glycosyl hydrolases family 17 protein 819556 At3g04010 47.13 FAMT farnesoic acid carboxyl-O-methyltransferase 823620 At3g44860 47.07 AT5G61350 Protein kinase superfamily protein 836256 At5g61350 47.07 AT1G53903 linoleate 9S-lipoxygenase-4 protein, putative (DUF581) 6241094 At1g53903 47.06 AT5G41590 LURP-one-like protein (DUF567) 834161 At5g41590 46.71 AT5G28630 glycine-rich protein 832966 At5g28630 46.67 AT1G53885 linoleate 9S-lipoxygenase-4 protein, putative (DUF581) 841826 At1g53885 46.52 AT2G37580 RING/U-box superfamily protein 818334 At2g37580 46.44 AT4G36500 uncharacterized protein 829802 At4g36500 46.38 COR413IM1 COLD REGULATED 314 INNER MEMBRANE 1 839815 At1g29395 46.36 DREB2A DRE-binding protein 2A 830424 At5g05410 46.23 AT4G39795 hypothetical protein (DUF581) 830138 At4g39795 46.12 AT1G78070 Transducin/WD40 repeat-like superfamily protein 844142 At1g78070 46.02 OCT6 organic cation/carnitine transporter 6 838207 At1g16370 45.98 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 837544 At1g10090 45.28 AT5G26010 Protein phosphatase 2C family protein 832670 At5g26010 45.07 GI gigantea protein (GI) 838883 At1g22770 45.04 AT3G29000 Calcium-binding EF-hand family protein 822540 At3g29000 44.94 AT5G13200 GRAM domain family protein 831159 At5g13200 44.85 AT4G33980 uncharacterized protein 829544 At4g33980 44.82 PDC2 pyruvate decarboxylase-2 835587 At5g54960 44.69 TIP2;2 tonoplast intrinsic protein 2;2 827446 At4g17340 44.56 AT1G53035 uncharacterized protein 841737 At1g53035 44.43 AT3G59350 Protein kinase superfamily protein 825104 At3g59350 44.39 PLAT2 Lipase/lipooxygenase, PLAT/LH2 family protein 816751 At2g22170 44.29 CIPK4 CBL-interacting protein kinase 4 827106 At4g14580 44.26 AT4G35985 Senescence/dehydration-associated protein-like protein 829753 At4g35985 44.14 AT1G53633 uncharacterized protein 7922339 At1g53633 43.99 AT2G12400 plasma membrane fusion protein 815712 At2g12400 43.92 AIF1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 819749 At3g05800 43.85
Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC PYK10 Glycosyl hydrolase superfamily protein 820082 At3g09260 -194.35 HSD2 hydroxysteroid dehydrogenase 2 823889 At3g47350 -182.30 ABCG35 pleiotropic drug resistance 7 838087 At1g15210 -181.32 GLL22 GDSL-like Lipase/Acylhydrolase superfamily protein 841838 At1g54000 -178.38 DAR4 DA1-related protein 4 831657 At5g17890 -172.96 GAD glutamate decarboxylase 831599 At5g17330 -172.89 AT2G38380 Peroxidase superfamily protein 818419 At2g38380 -172.74 AT1G34418 5007751 At1g34418 -170.44 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 825272 At3g61010 -169.51 AT1G22440 Zinc-binding alcohol dehydrogenase family protein 838850 At1g22440 -169.24 GRP9 GLYCINE RICH PROTEIN 9 815093 At2g05440 -168.75 UGT72E2 UDP-Glycosyltransferase superfamily protein 836802 At5g66690 -168.55 BAT1 HXXXD-type acyl-transferase family protein 829321 At4g31910 -168.51 AT3G20370 TRAF-like family protein 821582 At3g20370 -167.82 AT3G28550 Proline-rich extensin-like family protein 822485 At3g28550 -167.35 MLP34 MLP-like protein 34 843422 At1g70850 -165.70 RCI3 Peroxidase superfamily protein 837028 At1g05260 -165.17 GSTU8 glutathione S-transferase TAU 8 820083 At3g09270 -165.08 AT4G09310 SPla/RYanodine receptor (SPRY) domain-containing protein 826514 At4g09310 -164.99 AT4G09200 SPla/RYanodine receptor (SPRY) domain-containing protein 826501 At4g09200 -164.45 AHL20 AT-hook motif nuclear-localized protein 20 827093 At4g14465 -164.37 AT3G43740 Leucine-rich repeat (LRR) family protein 823485 At3g43740 -164.28 AT4G14905 Galactose oxidase/kelch repeat superfamily protein 827148 At4g14905 -164.20 AT1G23960 hypothetical protein (DUF626) 839007 At1g23960 -163.90 AT4G09250 SPla/RYanodine receptor (SPRY) domain-containing protein 826507 At4g09250 -163.41 EXT3 extensin 3 838728 At1g21310 -163.25 AT1G35320 uncharacterized protein 840421 At1g35320 -163.00 AT2G24755 5007908 At2g24755 -162.92 AGP31 arabinogalactan protein 31 839723 At1g28290 -161.80 AT5G26260 TRAF-like family protein 832695 At5g26260 -161.38 CSA1 disease resistance protein (TIR-NBS-LRR class) 831656 At5g17880 -161.38 AT1G11280 S-locus lectin protein kinase family protein 837670 At1g11280 -161.24 AT1G60505 5007818 At1g60505 -161.00 ZW9 TRAF-like family protein 842196 At1g58270 -161.00 AT5G44380 FAD-binding Berberine family protein 834464 At5g44380 -160.85 AT1G60680 NAD(P)-linked oxidoreductase superfamily protein 842362 At1g60680 -160.46 AT2G09795 5007869 At2g09795 -160.42 AT4G20480 Putative endonuclease or glycosyl hydrolase 827796 At4g20480 -160.19 AT4G07825 uncharacterized protein 826264 At4g07825 -160.09 AT3G18535 tubulin-tyrosine ligase 5008009 At3g18535 -159.93 BGLU22 Glycosyl hydrolase superfamily protein 842945 At1g66280 -159.39 DOX1 Peroxidase superfamily protein 821135 At3g01420 -159.20 BGLU15 beta glucosidase 15 819052 At2g44450 -158.84 PRR2 pinoresinol reductase 2 827000 At4g13660 -158.80 AT2G18980 Peroxidase superfamily protein 816415 At2g18980 -158.69 AT1G24881 F-box family protein 6241166 At1g24881 -158.69 AT2G14460 uncharacterized protein 815934 At2g14460 -158.55 AT1G25150 F-box family protein 10723103 At1g25150 -158.35 AT1G25055 F-box family protein 6241002 At1g25055 -158.00 AT1G24800 F-box family protein 6240216 At1g24800 -157.92 AT2G43610 Chitinase family protein 818963 At2g43610 -157.36 GSTU25 glutathione S-transferase TAU 25 838289 At1g17180 -156.89 AT4G30170 Peroxidase family protein 829140 At4g30170 -156.87 AT5G50665 uncharacterized protein 835137 At5g50665 -156.73 GOX3 Aldolase-type TIM barrel family protein 827563 At4g18360 -156.72 AT3G44430 uncharacterized protein 823568 At3g44430 -156.58 JAL31 jacalin-related lectin 31 820891 At3g16430 -156.42 RAX2 Duplicated homeodomain-like superfamily protein 818262 At2g36890 -156.37 TIP4;1 tonoplast intrinsic protein 4;1 817123 At2g25810 -156.32 AT4G17800 Putative AT-hook DNA-binding family protein 827502 At4g17800 -156.27 AT4G01740 Cysteine/Histidine-rich C1 domain family protein 828012 At4g01740 -156.05 RHD2 NADPH/respiratory burst oxidase protein D 835179 At5g51060 -155.66 AT4G15160 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 827182 At4g15160 -155.60 AT3G62270 HCO3- transporter family 825400 At3g62270 -155.39 MIZ1 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 818764 At2g41660 -155.27 ASL1 ASYMMETRIC LEAVES 2-like 1 836821 At5g66870 -155.16 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 821833 At3g22620 -155.16 AT2G41800 imidazolonepropionase (Protein of unknown function, DUF642) 818779 At2g41800 -154.82 UGT71C1 UDP-glucosyl transferase 71C1 817525 At2g29750 -154.81 AHL22 AT-hook motif nuclear-localized protein 22 819151 At2g45430 -154.66 FLS5 flavonol synthase 5 836480 At5g63600 -154.61 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase 829048 At4g29270 -154.59 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 820564 At3g13610 -154.39 ASE1 GLN phosphoribosyl pyrophosphate amidotransferase 1 816156 At2g16570 -154.17 DUR NAD(P)-binding Rossmann-fold superfamily protein 834475 At5g44480 -154.08 AT1G02810 Plant invertase/pectin methylesterase inhibitor superfamily 838078 At1g02810 -153.99 GSTU22 glutathione S-transferase TAU 22 844169 At1g78340 -153.93 WRKY14 WRKY DNA-binding protein 14 839945 At1g30650 -153.69 AT5G46510 Disease resistance protein (TIR-NBS-LRR class) family 834694 At5g46510 -153.67 NAI2 DNA topoisomerase-like protein 820839 At3g15950 -153.63 AT2G41440 agamous-like MADS-box protein 818742 At2g41440 -153.63 AT3G32980 Peroxidase superfamily protein 823067 At3g32980 -153.61 LRP1 Lateral root primordium (LRP) protein-like protein 831108 At5g12330 -153.44 PPC3 phosphoenolpyruvate carboxylase 3 820723 At3g14940 -153.29 GLR2.1 glutamate receptor 2.1 832768 At5g27100 -153.01 AT5G48940 Leucine-rich repeat transmembrane protein kinase family protein 834952 At5g48940 -152.91 AT1G12160 Flavin-binding monooxygenase family protein 837768 At1g12160 -152.33 AT2G11225 uncharacterized protein 28718249 AT2G11225 -152.15 EIR1 Auxin efflux carrier family protein 835813 At5g57090 -151.94 JAL22 jacalin-related lectin 22 818516 At2g39310 -151.81 AT5G51630 Disease resistance protein (TIR-NBS-LRR class) family 835237 At5g51630 -151.80 AT5G66390 Peroxidase superfamily protein 836771 At5g66390 -151.74 CYP705A8 cytochrome P450, family 705, subfamily A, polypeptide 8 817242 At2g27000 -151.70 AT5G23410 832407 At5g23410 -151.36 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein 824868 At3g57010 -151.29 AT1G23935 apoptosis inhibitory protein 2745761 At1g23935 -151.14 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 819425 At2g48130 -151.12 FLS3 flavonol synthase 3 836478 At5g63590 -150.99 UCC2 uclacyanin 2 819088 At2g44790 -150.80 SDR4 NAD(P)-binding Rossmann-fold superfamily protein 822580 At3g29250 -150.67	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT1G13650 uncharacterized protein 837926 At1g13650 -209.40 GER3 germin 3 832185 At5g20630 -199.88 FBA5 Aldolase superfamily protein 828759 At4g26530 -197.82 RBCS2B Ribulose bisphosphate carboxylase (small chain) family protein 833829 At5g38420 -196.38 AT2G10940 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 815558 At2g10940 -191.58 CA1 carbonic anhydrase 1 821134 At3g01500 -188.55 Lhca6 PSI type II chlorophyll a/b-binding protein (Lhca2*1) 838498 At1g19150 -188.30 RBCS1B Ribulose bisphosphate carboxylase (small chain) family protein 833830 At5g38430 -186.61 THI2.2 thionin 2.2 833659 At5g36910 -186.14 LHCB2.3 photosystem II light harvesting complex protein 2.3 822391 At3g27690 -183.67 AT2G29290 NAD(P)-binding Rossmann-fold superfamily protein 817478 At2g29290 -182.42 RBCS3B Ribulose bisphosphate carboxylase (small chain) family protein 833828 At5g38410 -181.84 CRK21 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 828428 At4g23290 -179.15 AT1G66100 Plant thionin 842924 At1g66100 -178.71 AT4G13575 uncharacterized protein 6240258 At4g13575 -178.56 AT4G28780 GDSL-like Lipase/Acylhydrolase superfamily protein 828999 At4g28780 -177.79 XTH6 xyloglucan endotransglucosylase/hydrolase 6 836702 At5g65730 -176.26 NdhU Chaperone DnaJ-domain superfamily protein 832247 At5g21430 -174.67 AT2G27420 Cysteine proteinases superfamily protein 817287 At2g27420 -174.45 NdhM subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex 3770591 At4g37925 -174.31 NEET 2 iron, 2 sulfur cluster binding protein 835246 At5g51720 -173.81 CA2 carbonic anhydrase 2 831326 At5g14740 -173.05 ESM1 GDSL-like lipase/acylhydrolase superfamily protein 820639 At3g14210 -172.10 AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834905 At5g48490 -171.08 PnsL3 PsbQ-like 1 821143 At3g01440 -169.34 CAB3 chlorophyll A/B binding protein 3 839869 At1g29910 -168.85 CAB2 chlorophyll A/B-binding protein 2 839870 At1g29920 -168.11 CRR7 chlororespiratory reduction 7 833917 At5g39210 -167.66 TGG2 glucoside glucohydrolase 2 832667 At5g25980 -167.26 BBX16 B-box type zinc finger protein with CCT domain-containing protein 843723 At1g73870 -166.77 PnsB3 NDH-dependent cyclic electron flow 1 820871 At3g16250 -166.35 LrgB uncharacterized protein 840100 At1g32080 -165.81 PnsB1 NDH-dependent cyclic electron flow 1 838168 At1g15980 -164.85 AT3G06880 Transducin/WD40 repeat-like superfamily protein 819873 At3g06880 -164.83 LTL1 Li-tolerant lipase 1 819584 At3g04290 -164.79 AGL87 AGAMOUS-like 87 838865 At1g22590 -164.46 LHCB2.2 photosystem II light harvesting complex protein 2.2 815055 At2g05070 -164.12 MRU1 mto 1 responding up 1 833513 At5g35490 -163.68 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein 827503 At4g17810 -163.23 AT1G06360 Fatty acid desaturase family protein 837147 At1g06360 -162.84 AT5G35480 uncharacterized protein 833512 At5g35480 -161.94 AT1G26761 Arabinanase/levansucrase/invertase 6241260 At1g26761 -161.88 AT2G27402 plastid transcriptionally active protein 2745565 At2g27402 -161.73 AT5G63180 Pectin lyase-like superfamily protein 836439 At5g63180 -161.51 AT1G21500 uncharacterized protein 838749 At1g21500 -161.03 FRO6 ferric reduction oxidase 6 835036 At5g49730 -160.57 FRO7 ferric reduction oxidase 7 835037 At5g49740 -160.54 NdhN oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 835938 At5g58260 -160.29 AT2G27385 Pollen Ole e 1 allergen and extensin family protein 817283 At2g27385 -159.94 PnsL1 PsbP-like protein 2 818532 At2g39470 -159.47 AT4G18970 GDSL-like Lipase/Acylhydrolase superfamily protein 827632 At4g18970 -159.37 AT3G59250 F-box/RNI-like superfamily protein 825094 At3g59250 -159.14 GAPA-2 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 837848 At1g12900 -159.08 CIPK20 CBL-interacting protein kinase 20 834622 At5g45820 -159.02 AT1G68780 RNI-like superfamily protein 843209 At1g68780 -158.95 AT3G05730 defensin-like protein 819742 At3g05730 -158.93 KCS19 3-ketoacyl-CoA synthase 19 830332 At5g04530 -158.90 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein 817479 At2g29300 -158.65 PTAC16 plastid transcriptionally active 16 823831 At3g46780 -158.06 RGF9 root meristem growth factor 836598 At5g64770 -157.89 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 840274 At1g33811 -157.75 AT4G16880 Leucine-rich repeat (LRR) family protein 827396 At4g16880 -157.29 AT4G06120 28719736 AT4G06120 -157.28 AT3G16670 Pollen Ole e 1 allergen and extensin family protein 820919 At3g16670 -157.15 AT5G15780 Pollen Ole e 1 allergen and extensin family protein 831434 At5g15780 -156.97 FKBP13 FK506-binding protein 13 834607 At5g45680 -156.47 LHB1B1 light-harvesting chlorophyll-protein complex II subunit B1 818006 At2g34430 -156.13 AT4G12917 5008136 At4g12917 -155.84 PRK phosphoribulokinase 840098 At1g32060 -155.49 DCF HXXXD-type acyl-transferase family protein 824033 At3g48720 -155.48 NDF5 NDH-dependent cyclic electron flow 5 841984 At1g55370 -154.67 AT5G24215 uncharacterized protein 28721192 AT5G24215 -154.11 PnsL2 PsbQ-like 2 837974 At1g14150 -153.95 DOT3 Phototropic-responsive NPH3 family protein 830889 At5g10250 -153.84 FBA1 fructose-bisphosphate aldolase 1 816672 At2g21330 -153.79 LHCB2.1 photosystem II light harvesting complex protein 2.1 815058 At2g05100 -153.69 STOMAGEN stomagen 826909 At4g12970 -153.51 PSAH2 photosystem I subunit H2 841653 At1g52230 -153.48 bHLH071 beta HLH protein 71 834712 At5g46690 -153.38 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 833646 At5g36790 -153.16 AT1G11850 uncharacterized protein 837732 At1g11850 -153.05 PGLP1 2-phosphoglycolate phosphatase 1 833635 At5g36700 -152.86 AT1G75460 ATP-dependent protease La (LON) domain protein 843882 At1g75460 -152.77 MYB29 myb domain protein 29 830662 At5g07690 -152.22 AT2G15020 uncharacterized protein 815991 At2g15020 -151.93 LTP lipid transfer protein 815994 At2g15050 -151.91 RLM3 disease resistance protein (TIR-NBS class) 827407 At4g16990 -151.77 AT1G50732 uncharacterized protein 10723115 At1g50732 -151.72 AT5G27290 stress regulated protein 832787 At5g27290 -151.62 AT2G34620 Mitochondrial transcription termination factor family protein 818027 At2g34620 -151.51 ESP epithiospecifier protein 841842 At1g54040 -151.29 AT5G16030 mental retardation GTPase activating protein 831460 At5g16030 -150.99 OEP6 outer envelope membrane protein 825491 At3g63160 -150.92 GOX1 Aldolase-type TIM barrel family protein 820665 At3g14420 -150.88 AT2G03550 alpha/beta-Hydrolases superfamily protein 814884 At2g03550 -150.65 HCEF1 high cyclic electron flow 1 824572 At3g54050 -150.64 AT1G70820 phosphoglucomutase, putative / glucose phosphomutase 843419 At1g70820 -150.63 AT4G12830 alpha/beta-Hydrolases superfamily protein 826895 At4g12830 -150.36 AT4G19530 disease resistance protein (TIR-NBS-LRR class) family 827695 At4g19530 -150.01 RBCS1A ribulose bisphosphate carboxylase small chain 1A 843029 At1g67090 -149.99	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC HR4 homolog of RPW8 4 824212 At3g50480 -228.67 ARCK1 Protein kinase superfamily protein 826796 At4g11890 -221.78 PR1 pathogenesis-related protein 1 815949 At2g14610 -215.77 AOX1D alternative oxidase 1D 840127 At1g32350 -211.93 SAG13 senescence-associated gene 13 817484 At2g29350 -210.10 AIG1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 840293 At1g33960 -203.06 ELI3-2 cinnamyl alcohol dehydrogenase 8 829955 At4g37990 -200.80 AT1G24145 uncharacterized protein 839027 At1g24145 -198.11 AT5G52760 Copper transport protein family 835353 At5g52760 -197.94 WAKL10 WALL ASSOCIATED KINASE (WAK)-LIKE 10 844307 At1g79680 -197.09 ZAT7 C2H2 and C2HC zinc fingers superfamily protein 823752 At3g46090 -195.71 AT1G57630 Toll-Interleukin-Resistance (TIR) domain family protein 842139 At1g57630 -195.37 BCB blue-copper-binding protein 832145 At5g20230 -191.43 WAK3 wall associated kinase 3 838719 At1g21240 -191.08 AT3G00850 28718433 AT3G00850 -191.08 BGL2 beta-1,3-glucanase 2 824893 At3g57260 -188.53 PNP-A plant natriuretic peptide A 816381 At2g18660 -187.56 CRK7 cysteine-rich RLK (RECEPTOR-like protein kinase) 7 828414 At4g23150 -187.00 AT1G13470 hypothetical protein (DUF1262) 837907 At1g13470 -186.41 PCR1 PLANT CADMIUM RESISTANCE 1 838053 At1g14880 -186.39 AT1G56060 cysteine-rich/transmembrane domain protein B 842057 At1g56060 -185.92 TPS04 terpene synthase 04 842405 At1g61120 -185.78 AT3G01830 Calcium-binding EF-hand family protein 820033 At3g01830 -185.10 AT2G38240 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 818403 At2g38240 -184.18 TAT3 tyrosine aminotransferase 3 817022 At2g24850 -183.31 AT1G66090 Disease resistance protein (TIR-NBS class) 842923 At1g66090 -183.05 NAC019 NAC domain containing protein 19 841722 At1g52890 -183.04 CYP71A13 cytochrome P450 family 71 polypeptide 817628 At2g30770 -181.64 GSTU3 glutathione S-transferase tau 3 817496 At2g29470 -181.48 AT5G51465 uncharacterized protein 28721262 AT5G51465 -181.41 AT3G48640 uncharacterized protein 824024 At3g48640 -179.12 AT4G19520 disease resistance protein (TIR-NBS-LRR class) family 827694 At4g19520 -178.93 AT1G26380 FAD-binding Berberine family protein 839180 At1g26380 -177.78 AT3G57460 catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein 824913 At3g57460 -176.68 MPK11 MAP kinase 11 839523 At1g01560 -176.37 AT4G38560 phospholipase-like protein (PEARLI 4) family protein 830013 At4g38560 -176.22 AT2G36780 UDP-Glycosyltransferase superfamily protein 818250 At2g36780 -176.02 AT2G36770 UDP-Glycosyltransferase superfamily protein 818249 At2g36770 -175.84 AT4G03450 Ankyrin repeat family protein 827913 At4g03450 -175.56 SBT3.3 Subtilase family protein 840190 At1g32960 -175.32 AT3G46080 C2H2-type zinc finger family protein 823751 At3g46080 -174.27 FAMT farnesoic acid carboxyl-O-methyltransferase 823620 At3g44860 -173.68 NATA1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 818489 At2g39030 -173.45 GSTU11 glutathione S-transferase TAU 11 843329 At1g69930 -173.41 AT2G04495 uncharacterized protein 814990 At2g04495 -172.79 PLA2A phospholipase A 2A 817197 At2g26560 -172.44 RLP23 receptor like protein 23 817828 At2g32680 -172.28 AT5G24210 alpha/beta-Hydrolases superfamily protein 832488 At5g24210 -171.98 AT1G05675 UDP-Glycosyltransferase superfamily protein 10723139 At1g05675 -169.59 LURP1 LURP-one-like protein (DUF567) 815943 At2g14560 -169.39 AT5G25260 SPFH/Band 7/PHB domain-containing membrane-associated protein family 832597 At5g25260 -168.12 CRK14 cysteine-rich RECEPTOR-like kinase 828421 At4g23220 -166.58 FRK1 FLG22-induced receptor-like kinase 1 816436 At2g19190 -166.36 AT3G02840 ARM repeat superfamily protein 821225 At3g02840 -166.36 XBAT34 uncharacterized protein 827080 At4g14365 -165.89 CML37 calmodulin like 37 834244 At5g42380 -165.34 AT3G60415 phosphoglycerate mutase family protein 28719419 AT3G60415 -165.09 CCOAMT caffeoyl-CoA 3-O-methyltransferase 843126 At1g67980 -164.46 FLOT1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 832596 At5g25250 -164.12 AT5G05300 uncharacterized protein 28720712 At5g05300 -163.16 WRKY40 WRKY DNA-binding protein 40 844423 At1g80840 -162.98 AT5G22520 uncharacterized protein 832313 At5g22520 -162.58 AT4G18253 receptor Serine/Threonine kinase-like protein 28720145 AT4G18253 -160.23 AT1G24147 uncharacterized protein 5007719 At1g24147 -160.18 CRK37 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 825780 At4g04500 -160.11 NAC3 NAC domain containing protein 3 820789 At3g15500 -159.74 CRK36 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 825779 At4g04490 -159.48 CRK24 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 828431 At4g23320 -158.51 AT1G26420 FAD-binding Berberine family protein 839184 At1g26420 -157.85 AT3G47250 transmembrane protein, putative (DUF247) 823878 At3g47250 -157.50 PUB54 plant U-box 54 839251 At1g01680 -156.75 CSLG2 cellulose synthase like G2 828500 At4g24000 -156.51 GSTU4 glutathione S-transferase tau 4 817495 At2g29460 -156.19 CRK6 cysteine-rich RLK (RECEPTOR-like protein kinase) 6 828413 At4g23140 -156.15 CRK15 cysteine-rich RECEPTOR-like kinase 828422 At4g23230 -155.96 LHT7 LYS/HIS transporter 7 829671 At4g35180 -155.89 AT4G11000 Ankyrin repeat family protein 826701 At4g11000 -155.36 AT5G10760 Eukaryotic aspartyl protease family protein 830943 At5g10760 -155.33 AT1G33030 O-methyltransferase family protein 840198 At1g33030 -154.93 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family 826718 At4g11170 -154.81 AT1G78410 VQ motif-containing protein 844177 At1g78410 -154.75 CYP76C2 cytochrome P450, family 76, subfamily C, polypeptide 2 819165 At2g45570 -153.92 PHT3;2 phosphate transporter 3;2 824046 At3g48850 -152.60 AT3G47480 Calcium-binding EF-hand family protein 823902 At3g47480 -152.30 MYB2 myb domain protein 2 819332 At2g47190 -152.02 WRKY75 WRKY DNA-binding protein 75 831147 At5g13080 -151.97 AT2G17740 Cysteine/Histidine-rich C1 domain family protein 816283 At2g17740 -151.96 JRG21 jasmonate-regulated gene 21 824763 At3g55970 -151.92 SARD1 Calmodulin binding protein-like protein 843716 At1g73805 -150.86 AT1G20310 syringolide-induced protein 838619 At1g20310 -150.22 AT1G26390 FAD-binding Berberine family protein 839181 At1g26390 -150.16 CYP81G1 cytochrome P450, family 81, subfamily G, polypeptide 1 836866 At5g67310 -149.44 BCAT-2 branched-chain amino acid transaminase 2 837543 At1g10070 -149.35 CRK13 cysteine-rich RLK (RECEPTOR-like protein kinase) 13 828420 At4g23210 -149.23 GPT2 glucose-6-phosphate/phosphate translocator 2 842477 At1g61800 -149.11 TIM17-1 translocase inner membrane subunit 17-1 838623 At1g20350 -148.85 AT5G52750 Heavy metal transport/detoxification superfamily protein 835352 At5g52750 -148.11 AT5G39520 hypothetical protein (DUF1997) 833948 At5g39520 -147.74 CCR4 CRINKLY4 related 4 834836 At5g47850 -146.76 AT2G32140 transmembrane receptor 817773 At2g32140 -146.26	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC GPT2 glucose-6-phosphate/phosphate translocator 2 842477 At1g61800 -123.70 AT5G60730 Anion-transporting ATPase 836194 At5g60730 -91.16 MYB90 myb domain protein 90 842957 At1g66390 -90.42 FIB2 fibrillarin 2 828668 At4g25630 -88.43 ELI3-2 cinnamyl alcohol dehydrogenase 8 829955 At4g37990 -87.75 NDB4 NAD(P)H dehydrogenase B4 816609 At2g20800 -87.09 AT3G28580 P-loop containing nucleoside triphosphate hydrolases superfamily protein 822488 At3g28580 -86.29 LDOX leucoanthocyanidin dioxygenase 828387 At4g22880 -85.16 AT3G03060 P-loop containing nucleoside triphosphate hydrolases superfamily protein 821146 At3g03060 -85.04 AT5G57123 uncharacterized protein 835817 At5g57123 -84.32 CYP71A13 cytochrome P450 family 71 polypeptide 817628 At2g30770 -84.21 Hsp70-2 Heat shock protein 70 (Hsp 70) family protein 831856 At5g02490 -83.94 AT2G04070 MATE efflux family protein 814943 At2g04070 -79.97 NAC103 NAC domain containing protein 103 836527 At5g64060 -79.93 CRK7 cysteine-rich RLK (RECEPTOR-like protein kinase) 7 828414 At4g23150 -79.47 GAD4 glutamate decarboxylase 4 814732 At2g02010 -79.25 DFR dihydroflavonol 4-reductase 834291 At5g42800 -78.88 AT5MAT HXXXD-type acyl-transferase family protein 822623 At3g29590 -78.72 AT1G24090 RNase H family protein 839020 At1g24090 -78.56 EMB3120 uncharacterized protein 820719 At3g14900 -78.50 AT2G04050 MATE efflux family protein 814939 At2g04050 -78.06 SAG13 senescence-associated gene 13 817484 At2g29350 -78.05 AT5G51440 HSP20-like chaperones superfamily protein 835218 At5g51440 -77.41 NAC044 NAC domain containing protein 44 819872 At3g01600 -77.41 GSTF12 glutathione S-transferase phi 12 831586 At5g17220 -77.19 LHT7 LYS/HIS transporter 7 829671 At4g35180 -77.02 PAD3 Cytochrome P450 superfamily protein 822298 At3g26830 -76.33 AT3G62460 Putative endonuclease or glycosyl hydrolase 825420 At3g62460 -76.14 AT1G05730 FAM136A-like protein (DUF842) 837080 At1g05730 -75.99 PNP-A plant natriuretic peptide A 816381 At2g18660 -75.71 AT5G14580 polyribonucleotide nucleotidyltransferase 831309 At5g14580 -75.60 RLP38 receptor like protein 38 821887 At3g23120 -75.44 HDA3 histone deacetylase 3 823605 At3g44750 -74.87 DTX1 MATE efflux family protein 814938 At2g04040 -74.66 AT3G09680 Ribosomal protein S12/S23 family protein 820125 At3g09680 -74.49 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein 816923 At2g23910 -74.48 AT3G15357 phosphopantothenoylcysteine decarboxylase subunit 820774 At3g15357 -74.40 AT3G23370 RNA-binding (RRM/RBD/RNP motifs) family protein 821918 At3g23370 -74.34 PR1 pathogenesis-related protein 1 815949 At2g14610 -74.26 TAT3 tyrosine aminotransferase 3 817022 At2g24850 -74.18 AT5G59240 Ribosomal protein S8e family protein 836042 At5g59240 -74.07 SBT3.3 Subtilase family protein 840190 At1g32960 -73.70 AT5G58610 PHD finger transcription factor 835975 At5g58610 -73.54 AT5G64710 Putative endonuclease or glycosyl hydrolase 836592 At5g64710 -73.51 ABCG40 pleiotropic drug resistance 12 838122 At1g15520 -73.45 GSTU25 glutathione S-transferase TAU 25 838289 At1g17180 -73.38 BG3 beta-1,3-glucanase 3 824891 At3g57240 -73.17 LOJ LATERAL ORGAN JUNCTION 818508 At2g39230 -73.10 GR-RBP3 glycine-rich RNA-binding protein 3 836224 At5g61030 -72.99 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 820468 At3g12860 -72.93 AT5G06550 transferring glycosyl group transferase 830543 At5g06550 -72.66 WAK3 wall associated kinase 3 838719 At1g21240 -72.23 AT1G15870 Mitochondrial glycoprotein family protein 838157 At1g15870 -72.04 AT5G26220 ChaC-like family protein 832691 At5g26220 -71.85 PR5 pathogenesis-related protein 5 843842 At1g75040 -71.85 AT1G23100 GroES-like family protein 838918 At1g23100 -71.80 UF3GT UDP-glucose:flavonoid 3-o-glucosyltransferase 835489 At5g54060 -71.59 AT2G14460 uncharacterized protein 815934 At2g14460 -71.52 PMH1 putative mitochondrial RNA helicase 1 821800 At3g22310 -71.34 AT2G32220 Ribosomal L27e protein family 817781 At2g32220 -71.31 NOP56 NOP56-like pre RNA processing ribonucleoprotein 842063 At1g56110 -71.04 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 829534 At4g33905 -70.95 AT5G40040 60S acidic ribosomal protein family 834001 At5g40040 -70.72 AT5G09840 Putative endonuclease or glycosyl hydrolase 830844 At5g09840 -70.41 AT4G30800 Nucleic acid-binding, OB-fold-like protein 829203 At4g30800 -70.37 TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 826571 At4g09820 -70.32 AT4G04940 transducin family protein / WD-40 repeat family protein 825833 At4g04940 -70.23 ICK6 inhibitor/interactor with cyclin-dependent kinase 834940 At5g48820 -70.10 AT4G12735 uncharacterized protein 2745703 At4g12735 -70.02 ARD3 acireductone dioxygenase 3 817180 At2g26400 -69.90 ChlAKR NAD(P)-linked oxidoreductase superfamily protein 818354 At2g37770 -69.75 PRMT1A protein arginine methyltransferase 1A 816486 At2g19670 -69.74 PRX52 Peroxidase superfamily protein 830416 At5g05340 -69.73 NUDT6 nudix hydrolase homolog 6 814985 At2g04450 -69.53 AT1G18320 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 838412 At1g18320 -69.15 ERF71 Integrase-type DNA-binding superfamily protein 819365 At2g47520 -69.06 ELIP2 Chlorophyll A-B binding family protein 827119 At4g14690 -68.82 AT5G27330 Prefoldin chaperone subunit family protein 832791 At5g27330 -68.72 AT1G07400 HSP20-like chaperones superfamily protein 837252 At1g07400 -68.45 AT5G16930 AAA-type ATPase family protein 831556 At5g16930 -68.43 PPR596 PENTATRICOPEPTIDE REPEAT 596 844367 At1g80270 -68.39 AT3G16330 Avr9/Cf-9 rapidly elicited protein 820880 At3g16330 -68.37 AT1G43910 P-loop containing nucleoside triphosphate hydrolases superfamily protein 840990 At1g43910 -68.31 LTP6 lipid transfer protein 6 820024 At3g08770 -68.27 GSTU4 glutathione S-transferase tau 4 817495 At2g29460 -67.76 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein 832770 At5g27120 -67.75 AT1G51380 DEA(D/H)-box RNA helicase family protein 841562 At1g51380 -67.69 CYP76C2 cytochrome P450, family 76, subfamily C, polypeptide 2 819165 At2g45570 -67.68 AT3G10530 Transducin/WD40 repeat-like superfamily protein 820218 At3g10530 -67.19 AT2G08760 28718020 AT2G08760 -67.04 HSP17.6II 17.6 kDa class II heat shock protein 831075 At5g12020 -67.02 GSTF6 glutathione S-transferase 6 839515 At1g02930 -67.02 BGL2 beta-1,3-glucanase 2 824893 At3g57260 -66.97 AT1G30960 GTP-binding family protein 839983 At1g30960 -66.85 PHT3;2 phosphate transporter 3;2 824046 At3g48850 -66.83 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 816648 At2g21130 -66.63 RACK1C_AT receptor for activated C kinase 1C 821338 At3g18130 -66.51 LETM1 LETM1-like protein 825151 At3g59820 -66.49 HSP60-2 heat shock protein 60-2 817883 At2g33210 -66.16 AT1G56060 cysteine-rich/transmembrane domain protein B 842057 At1g56060 -66.15	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT2G27420 Cysteine proteinases superfamily protein 817287 At2g27420 -168.70 AT2G15020 uncharacterized protein 815991 At2g15020 -150.98 BBX30 B-box type zinc finger family protein 3769879 At4g15248 -135.51 AT1G65870 Disease resistance-responsive (dirigent-like protein) family protein 842898 At1g65870 -130.82 BBX31 B-box type zinc finger family protein 821744 At3g21890 -130.27 SQP1 FAD/NAD(P)-binding oxidoreductase family protein 832480 At5g24150 -128.28 BBX32 B-box 32 821667 At3g21150 -124.58 AT1G65490 uncharacterized protein 842861 At1g65490 -121.88 ELIP1 Chlorophyll A-B binding family protein 821855 At3g22840 -117.78 ARGAH2 Arginase/deacetylase superfamily protein 826458 At4g08870 -116.59 scpl10 serine carboxypeptidase-like 10 816831 At2g23000 -114.66 AT3G09450 fusaric acid resistance family protein 820103 At3g09450 -112.73 BBX16 B-box type zinc finger protein with CCT domain-containing protein 843723 At1g73870 -112.25 AMT1;2 ammonium transporter 1;2 842786 At1g64780 -112.23 FAMT farnesoic acid carboxyl-O-methyltransferase 823620 At3g44860 -112.01 GSTF12 glutathione S-transferase phi 12 831586 At5g17220 -111.53 PPT2 phosphoenolpyruvate (pep)/phosphate translocator 2 821114 At3g01550 -111.05 AT3G28270 transmembrane protein, putative (DUF677) 822453 At3g28270 -110.04 AT4G34550 F-box protein 829606 At4g34550 -109.55 GBSS1 UDP-Glycosyltransferase superfamily protein 840184 At1g32900 -108.82 ECS1 ECS1 840047 At1g31580 -107.16 LEA3 Late embryogenesis abundant 3 (LEA3) family protein 839304 At1g02820 -106.90 PAP1 production of anthocyanin pigment 1 842120 At1g56650 -105.85 AT5G66740 spindle assembly abnormal protein (DUF620) 836807 At5g66740 -105.73 FLS1 flavonol synthase 1 830765 At5g08640 -104.52 cPT4 Undecaprenyl pyrophosphate synthetase family protein 835991 At5g58770 -104.34 ELIP2 Chlorophyll A-B binding family protein 827119 At4g14690 -103.91 UF3GT UDP-glucose:flavonoid 3-o-glucosyltransferase 835489 At5g54060 -103.65 AT1G13650 uncharacterized protein 837926 At1g13650 -102.65 ANK ankyrin 835550 At5g54610 -102.52 AAE12 acyl activating enzyme 12 842901 At1g65890 -102.26 AT1G24147 uncharacterized protein 5007719 At1g24147 -102.11 LDOX leucoanthocyanidin dioxygenase 828387 At4g22880 -101.89 SWEET13 Nodulin MtN3 family protein 835152 At5g50800 -101.80 AT1G66100 Plant thionin 842924 At1g66100 -101.70 AT3G56290 potassium transporter 824796 At3g56290 -100.97 AT5G37550 uncharacterized protein 833733 At5g37550 -100.74 AT1G24580 RING/U-box superfamily protein 2745762 At1g24580 -100.55 ASG4 Homeodomain-like superfamily protein 839337 At1g01520 -99.98 JMT jasmonic acid carboxyl methyltransferase 838551 At1g19640 -99.91 CHIL Chalcone-flavanone isomerase family protein 830409 At5g05270 -99.72 DFR dihydroflavonol 4-reductase 834291 At5g42800 -99.53 LHY Homeodomain-like superfamily protein 839341 At1g01060 -99.42 AT1G73325 Kunitz family trypsin and protease inhibitor protein 843667 At1g73325 -99.32 TT4 Chalcone and stilbene synthase family protein 831241 At5g13930 -99.24 XTH31 xyloglucan endo-transglycosylase-related 8 823634 At3g44990 -97.20 ACA1 alpha carbonic anhydrase 1 824438 At3g52720 -97.15 AT3G21670 Major facilitator superfamily protein 821721 At3g21670 -96.84 FAR5 fatty acid reductase 5 823580 At3g44550 -96.72 4CL3 4-coumarate:CoA ligase 3 842814 At1g65060 -96.70 AT5G59130 Subtilase family protein 836031 At5g59130 -95.79 AT3G44450 uncharacterized protein 823570 At3g44450 -95.72 AT5G19240 Glycoprotein membrane precursor GPI-anchored 832044 At5g19240 -95.23 NDA1 alternative NAD(P)H dehydrogenase 1 837229 At1g07180 -94.97 AT5G38020 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 833781 At5g38020 -94.50 AT5G55570 uncharacterized protein 835651 At5g55570 -94.30 NAS1 nicotianamine synthase 1 830377 At5g04950 -94.00 NdhT Chaperone DnaJ-domain superfamily protein 826517 At4g09350 -93.42 AT4G02420 Concanavalin A-like lectin protein kinase family protein 828035 At4g02420 -92.23 CSLG1 cellulose synthase like G1 828501 At4g24010 -91.29 CYP79F1 cytochrome p450 79f1 838211 At1g16410 -91.24 AT1G26790 Dof-type zinc finger DNA-binding family protein 839220 At1g26790 -91.09 TAT3 tyrosine aminotransferase 3 817022 At2g24850 -91.08 SAG29 senescence-associated gene 29 831156 At5g13170 -90.33 TBL26 TRICHOME BIREFRINGENCE-LIKE 26 827902 At4g01080 -90.28 AT2G22590 UDP-Glycosyltransferase superfamily protein 816790 At2g22590 -90.11 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 821833 At3g22620 -89.45 TIR toll/interleukin-1 receptor-like protein 843624 At1g72930 -89.22 AT2G30766 uncharacterized protein 6240993 At2g30766 -89.20 ERD9 Glutathione S-transferase family protein 837576 At1g10370 -89.16 GPX7 glutathione peroxidase 7 829316 At4g31870 -88.53 AT3G44970 Cytochrome P450 superfamily protein 823632 At3g44970 -88.32 UP6 uncharacterized protein 838244 At1g16730 -87.77 FMO GS-OX1 flavin-monooxygenase glucosinolate S-oxygenase 1 842897 At1g65860 -87.71 UMAMIT36 nodulin MtN21 /EamA-like transporter family protein 843362 At1g70260 -86.83 AT2G25510 uncharacterized protein 817089 At2g25510 -86.73 UGT84A1 UDP-Glycosyltransferase superfamily protein 827220 At4g15480 -86.51 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily protein 820970 At3g17130 -86.34 AT5MAT HXXXD-type acyl-transferase family protein 822623 At3g29590 -86.32 HRGP1 hydroxyproline-rich glycoprotein 824624 At3g54590 -86.11 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 828175 At4g00050 -85.40 AT1G29720 Leucine-rich repeat transmembrane protein kinase 839850 At1g29720 -85.13 ATCSLA15 Nucleotide-diphospho-sugar transferases superfamily protein 826972 At4g13410 -85.05 LSU2 response to low sulfur 2 832538 At5g24660 -84.91 MSRB6 methionine sulfoxide reductase B6 825821 At4g04840 -84.84 EXPA5 expansin A5 822543 At3g29030 -84.77 AT1G60590 Pectin lyase-like superfamily protein 842353 At1g60590 -84.74 UGT76D1 UDP-glucosyl transferase 76D1 817189 At2g26480 -84.54 AT5G20790 uncharacterized protein 832202 At5g20790 -84.23 GolS3 galactinol synthase 3 837457 At1g09350 -84.01 SNZ Integrase-type DNA-binding superfamily protein 818510 At2g39250 -83.95 UGT72E2 UDP-Glycosyltransferase superfamily protein 836802 At5g66690 -83.76 MC8 metacaspase 8 838212 At1g16420 -83.72 CCA1 circadian clock associated 1 819296 At2g46830 -83.61 CYP96A4 cytochrome P450, family 96, subfamily A, polypeptide 4 835308 At5g52320 -83.49 TLL1 triacylglycerol lipase-like 1 841089 At1g45201 -83.37 AT4G03450 Ankyrin repeat family protein 827913 At4g03450 -83.13 MYB29 myb domain protein 29 830662 At5g07690 -83.09 FMO GS-OX3 flavin-monooxygenase glucosinolate S-oxygenase 3 842553 At1g62560 -83.07 BGLU47 beta-glucosidase 47 828264 At4g21760 -82.89	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC TSPO TSPO(outer membrane tryptophan-rich sensory protein)-like protein 819389 At2g47770 -165.27 AT3G17520 Late embryogenesis abundant protein (LEA) family protein 821017 At3g17520 -152.50 LEA4-5 Late Embryogenesis Abundant 4-5 830565 At5g06760 -151.26 LEA7 Late embryogenesis abundant protein (LEA) family protein 841701 At1g52690 -150.38 AT5G50360 von willebrand factor A domain protein 835103 At5g50360 -146.59 AT3G02480 Late embryogenesis abundant protein (LEA) family protein 821185 At3g02480 -133.62 HAI2 highly ABA-induced PP2C protein 2 837255 At1g07430 -128.91 SAG29 senescence-associated gene 29 831156 At5g13170 -128.70 LEA18 Late embryogenesis abundant protein, group 1 protein 818097 At2g35300 -127.39 NADP-ME1 NADP-malic enzyme 1 816509 At2g19900 -127.19 RD20 Caleosin-related family protein 817901 At2g33380 -124.25 LTI65 CAP160 protein 835306 At5g52300 -121.68 LTP4 lipid transfer protein 4 836050 At5g59310 -121.36 AT3G27250 uncharacterized protein 822344 At3g27250 -120.31 AT3G03341 cold-regulated protein 6240770 At3g03341 -119.78 AT5G01300 PEBP (phosphatidylethanolamine-binding protein) family protein 830983 At5g01300 -118.11 GolS2 galactinol synthase 2 842114 At1g56600 -117.74 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 818363 At2g37870 -116.39 AT2G21820 seed maturation protein 816718 At2g21820 -115.09 AT5G15500 Ankyrin repeat family protein 831403 At5g15500 -113.56 ECP63 embryonic cell protein 63 818236 At2g36640 -112.26 AT5G24080 Protein kinase superfamily protein 832473 At5g24080 -112.20 AT3G15670 Late embryogenesis abundant protein (LEA) family protein 820810 At3g15670 -111.36 RAB18 Dehydrin family protein 836772 At5g66400 -110.95 AT5G40800 uncharacterized protein 834080 At5g40800 -110.73 ELIP1 Chlorophyll A-B binding family protein 821855 At3g22840 -109.19 HAI1 PP2C protein (Clade A protein phosphatases type 2C) 836040 At5g59220 -107.74 AT1G24580 RING/U-box superfamily protein 2745762 At1g24580 -106.37 ASG4 Homeodomain-like superfamily protein 839337 At1g01520 -106.22 LTP3 lipid transfer protein 3 836051 At5g59320 -106.21 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein 843280 At1g69480 -105.66 AT2G42560 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 818856 At2g42560 -105.64 AT5G07330 NFU1 iron-sulfur cluster protein 830624 At5g07330 -104.62 DAA1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 842716 At1g64110 -103.70 AT4G23680 Polyketide cyclase/dehydrase and lipid transport superfamily protein 828468 At4g23680 -102.82 AT5G05220 uncharacterized protein 830404 At5g05220 -101.27 AT5G66780 late embryogenesis abundant protein 836811 At5g66780 -101.18 DIP2 E3 ubiquitin-protein ligase 831903 At5g03210 -99.45 ChlAKR NAD(P)-linked oxidoreductase superfamily protein 818354 At2g37770 -98.93 BBX31 B-box type zinc finger family protein 821744 At3g21890 -98.46 KIN1 stress-responsive protein (KIN1) / stress-induced protein (KIN1) 831453 At5g15960 -98.29 PAP1 production of anthocyanin pigment 1 842120 At1g56650 -98.26 GASA3 GAST1 protein homolog 3 826545 At4g09600 -98.21 XERO1 dehydrin xero 1 824262 At3g50980 -96.67 AT1G07985 uncharacterized protein 2745747 At1g07985 -95.54 AT3G48510 AtIII18x5-like protein 824010 At3g48510 -95.24 CSLG2 cellulose synthase like G2 828500 At4g24000 -95.05 SQP1 FAD/NAD(P)-binding oxidoreductase family protein 832480 At5g24150 -94.39 AT3G48240 Octicosapeptide/Phox/Bem1p family protein 823982 At3g48240 -94.30 AtLEA4-1 Late embryogenesis abundant protein, group 1 protein 840150 At1g32560 -93.94 BETA-VPE beta vacuolar processing enzyme 842569 At1g62710 -93.94 PUB19 ARM repeat superfamily protein 842314 At1g60190 -93.35 AT5G63350 von willebrand factor A domain protein 836455 At5g63350 -92.55 SOM Zinc finger C-x8-C-x5-C-x3-H type family protein 839408 At1g03790 -91.60 HVA22B HVA22 homologue B 836369 At5g62490 -90.24 AT2G25625 histone deacetylase-like protein 817103 At2g25625 -89.16 AT3G53040 late embryogenesis abundant protein, putative / LEA protein 824470 At3g53040 -88.10 AT4G36600 Late embryogenesis abundant (LEA) protein 829812 At4g36600 -87.70 KCS2 3-ketoacyl-CoA synthase 2 839578 At1g04220 -87.56 MYB102 MYB-like 102 826916 At4g21440 -87.25 AT1G09500 NAD(P)-binding Rossmann-fold superfamily protein 837475 At1g09500 -86.78 HSFA6A heat shock transcription factor A6A 834406 At5g43840 -86.58 AT1G52560 HSP20-like chaperones superfamily protein 841687 At1g52560 -85.98 AT1G04560 AWPM-19-like family protein 839491 At1g04560 -85.88 SUS3 sucrose synthase 3 828081 At4g02280 -85.58 BBX30 B-box type zinc finger family protein 3769879 At4g15248 -85.14 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 829494 At4g33550 -84.57 AT1G72100 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 843541 At1g72100 -84.29 GLYI7 Lactoylglutathione lyase / glyoxalase I family protein 844356 At1g80160 -83.14 SWEET13 Nodulin MtN3 family protein 835152 At5g50800 -82.41 AT1G70640 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein 843401 At1g70640 -82.39 AT4G08570 Heavy metal transport/detoxification superfamily protein 826418 At4g08570 -81.72 HAI3 highly ABA-induced PP2C protein 3 817487 At2g29380 -81.43 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein 824868 At3g57010 -81.41 HB-7 homeobox 7 819280 At2g46680 -81.11 AT3G28270 transmembrane protein, putative (DUF677) 822453 At3g28270 -80.96 AT1G67365 5007838 At1g67365 -80.80 MYB112 myb domain protein 112 841218 At1g48000 -80.64 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 829534 At4g33905 -80.45 AT5G24155 FAD/NAD(P)-binding oxidoreductase family protein 832481 At5g24155 -79.69 AT4G21020 Late embryogenesis abundant protein (LEA) family protein 827849 At4g21020 -79.16 AT2G47780 Rubber elongation factor protein (REF) 819390 At2g47780 -78.35 GSTF12 glutathione S-transferase phi 12 831586 At5g17220 -78.21 AT5G39520 hypothetical protein (DUF1997) 833948 At5g39520 -78.18 ATHSP22.0 HSP20-like chaperones superfamily protein 826616 At4g10250 -77.53 AHG1 Protein phosphatase 2C family protein 835250 At5g51760 -77.44 CYP707A4 cytochrome P450, family 707, subfamily A, polypeptide 4 821461 At3g19270 -77.40 PYD4 PYRIMIDINE 4 820034 At3g08860 -77.07 5PTASE11 inositol polyphosphate 5-phosphatase 11 841160 At1g47510 -77.06 HB-12 homeobox 12 825362 At3g61890 -76.77 HIS1-3 histone H1-3 816317 At2g18050 -76.72 AT2G41190 Transmembrane amino acid transporter family protein 818718 At2g41190 -76.58 AT2G23110 Late embryogenesis abundant protein, group 6 816843 At2g23110 -76.38 AT4G23493 uncharacterized protein 828448 At4g23493 -76.12 AT5G54165 Avr9/Cf-9 rapidly elicited protein 6241133 At5g54165 -76.07 AT1G16850 uncharacterized protein 838256 At1g16850 -75.84 HSP70 heat shock protein 70 820438 At3g12580 -75.66 UP6 uncharacterized protein 838244 At1g16730 -75.51 SRG1 senescence-related gene 1 838272 At1g17020 -75.31 AT1G01250 Integrase-type DNA-binding superfamily protein 839322 At1g01250 -75.09	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC DDF1 Integrase-type DNA-binding superfamily protein 837817 At1g12610 -146.56 RRTF1 redox responsive transcription factor 1 829591 At4g34410 -144.78 ERF13 ethylene-responsive element binding factor 13 819093 At2g44840 -120.78 AT1G68250 uncharacterized protein 843154 At1g68250 -118.85 AT5G05220 uncharacterized protein 830404 At5g05220 -113.27 AT4G27654 uncharacterized protein 828878 At4g27654 -112.87 LEA7 Late embryogenesis abundant protein (LEA) family protein 841701 At1g52690 -110.56 EXLA3 expansin-like A3 823739 At3g45960 -109.82 JAZ8 jasmonate-zim-domain protein 8 839893 At1g30135 -107.59 JAZ7 jasmonate-zim-domain protein 7 818025 At2g34600 -105.05 AT5G19110 Eukaryotic aspartyl protease family protein 832031 At5g19110 -104.30 RAS1 RESPONSE TO ABA AND SALT 1 837529 At1g09950 -103.67 AT3G55840 Hs1pro-1 protein 824750 At3g55840 -103.59 CML38 calmodulin-like 38 843998 At1g76650 -102.62 AT2G32200 cysteine-rich/transmembrane domain A-like protein 817779 At2g32200 -101.52 TCH4 Xyloglucan endotransglucosylase/hydrolase family protein 835860 At5g57560 -100.65 AT3G15670 Late embryogenesis abundant protein (LEA) family protein 820810 At3g15670 -100.05 AT2G35290 uncharacterized protein 818096 At2g35290 -99.76 AT1G33760 Integrase-type DNA-binding superfamily protein 840267 At1g33760 -99.34 AT1G07135 glycine-rich protein 837224 At1g07135 -98.95 XTH18 xyloglucan endotransglucosylase/hydrolase 18 829151 At4g30280 -98.49 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 816273 At2g17660 -98.44 CBF1 C-repeat/DRE binding factor 1 828653 At4g25490 -97.03 ECP63 embryonic cell protein 63 818236 At2g36640 -95.71 AT3G02480 Late embryogenesis abundant protein (LEA) family protein 821185 At3g02480 -95.26 JAZ10 jasmonate-zim-domain protein 10 831162 At5g13220 -95.16 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 816806 At2g22760 -95.11 AT5G21960 Integrase-type DNA-binding superfamily protein 832256 At5g21960 -94.50 AT5G44310 Late embryogenesis abundant protein (LEA) family protein 834454 At5g44310 -94.42 MAPKKK21 mitogen-activated protein kinase kinase kinase 21 3770588 At4g36950 -93.60 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 824011 At3g48520 -93.50 AT1G15010 mediator of RNA polymerase II transcription subunit 838066 At1g15010 -93.01 VSP2 vegetative storage protein 2 832546 At5g24770 -92.98 LOX3 lipoxygenase 3 838314 At1g17420 -92.79 RTFL12 ROTUNDIFOLIA like 12 5008138 At4g13395 -92.54 PHI-1 Phosphate-responsive 1 family protein 840399 At1g35140 -91.90 JAZ5 jasmonate-zim-domain protein 5 838310 At1g17380 -91.81 FBS1 F-box family protein 842428 At1g61340 -91.55 AT5G45630 senescence regulator (Protein of unknown function, DUF584) 834603 At5g45630 -90.86 EXLA2 expansin-like A2 829997 At4g38400 -90.59 AT1G76640 Calcium-binding EF-hand family protein 843997 At1g76640 -90.44 AT1G22470 uncharacterized protein 838853 At1g22470 -89.71 AT5G01380 Homeodomain-like superfamily protein 831895 At5g01380 -88.28 CYP715A1 cytochrome P450, family 715, subfamily A, polypeptide 1 835316 At5g52400 -88.28 WRKY40 WRKY DNA-binding protein 40 844423 At1g80840 -87.72 AT5G38700 cotton fiber protein 833860 At5g38700 -87.49 DIP2 E3 ubiquitin-protein ligase 831903 At5g03210 -87.47 AT1G70130 Concanavalin A-like lectin protein kinase family protein 843349 At1g70130 -86.96 AGP1 arabinogalactan protein 1 836552 At5g64310 -86.72 AT4G24110 NADP-specific glutamate dehydrogenase 828511 At4g24110 -86.50 AT4G29780 nuclease 829100 At4g29780 -86.39 SRO5 uncharacterized protein 836372 At5g62520 -86.17 LEA4-5 Late Embryogenesis Abundant 4-5 830565 At5g06760 -86.13 AT2G14290 LL-diaminopimelate protein (DUF295) 815916 At2g14290 -86.08 AT3G02840 ARM repeat superfamily protein 821225 At3g02840 -85.17 AT5G28237 Pyridoxal-5'-phosphate-dependent enzyme family protein 2746023 At5g28237 -84.86 AT4G28140 Integrase-type DNA-binding superfamily protein 828929 At4g28140 -84.69 EM1 Stress induced protein 824344 At3g51810 -84.60 TIP3;1 Aquaporin-like superfamily protein 843653 At1g73190 -84.06 AT3G43250 coiled-coil protein (DUF572) 823400 At3g43250 -83.64 AT2G47780 Rubber elongation factor protein (REF) 819390 At2g47780 -83.55 PDF1 protodermal factor 1 818884 At2g42840 -83.38 ABR1 Integrase-type DNA-binding superfamily protein 836596 At5g64750 -83.18 CBF2 C-repeat/DRE binding factor 2 828651 At4g25470 -83.08 XTR6 xyloglucan endotransglycosylase 6 828686 At4g25810 -82.60 EXO Phosphate-responsive 1 family protein 826473 At4g08950 -82.43 ACS8 1-amino-cyclopropane-1-carboxylate synthase 8 829933 At4g37770 -81.98 AT2G38240 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 818403 At2g38240 -81.96 AT4G33467 uncharacterized protein 5008180 At4g33467 -81.84 AT1G29680 histone acetyltransferase (DUF1264) 839845 At1g29680 -81.73 BAM5 beta-amylase 5 827185 At4g15210 -81.48 ORA47 Integrase-type DNA-binding superfamily protein 843832 At1g74930 -81.31 LOX4 PLAT/LH2 domain-containing lipoxygenase family protein 843584 At1g72520 -81.16 LEA18 Late embryogenesis abundant protein, group 1 protein 818097 At2g35300 -81.16 AT3G17520 Late embryogenesis abundant protein (LEA) family protein 821017 At3g17520 -80.41 LEA dehydrin LEA 816688 At2g21490 -80.39 NAC019 NAC domain containing protein 19 841722 At1g52890 -80.39 AAE12 acyl activating enzyme 12 842901 At1g65890 -80.19 AT4G29030 Putative membrane lipoprotein 829024 At4g29030 -79.92 PAO1 polyamine oxidase 1 831215 At5g13700 -79.38 E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 830694 At5g08000 -79.24 AT5G19100 Eukaryotic aspartyl protease family protein 832030 At5g19100 -78.71 AT3G48510 AtIII18x5-like protein 824010 At3g48510 -78.55 AT1G02660 alpha/beta-Hydrolases superfamily protein 839544 At1g02660 -78.45 KIN1 stress-responsive protein (KIN1) / stress-induced protein (KIN1) 831453 At5g15960 -78.42 MBP2 myrosinase-binding protein 2 841632 At1g52030 -78.33 EXLA1 expansin-like A1 823740 At3g45970 -78.17 CYS2 PHYTOCYSTATIN 2 817757 At2g31980 -78.14 HSFA6B heat shock transcription factor A6B 821854 At3g22830 -78.09 AT5G36925 uncharacterized protein 833661 At5g36925 -78.03 AT1G50745 plant mobile domain protein 28717343 AT1G50745 -78.00 SOB5 suppressor of phytochrome b 5 830711 At5g08150 -77.94 AT1G19210 Integrase-type DNA-binding superfamily protein 838504 At1g19210 -77.69 AT5G64870 SPFH/Band 7/PHB domain-containing membrane-associated protein family 836610 At5g64870 -77.59 BPS3 BPS1-like protein 827971 At4g01360 -77.57 AT1G54020 GDSL-like Lipase/Acylhydrolase superfamily protein 841840 At1g54020 -77.47 BHLH92 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 834385 At5g43650 -76.57 DIC2 dicarboxylate carrier 2 828559 At4g24570 -76.43 PP2-B14 phloem protein 2-B14 842078 At1g56250 -76.14 AT5G65300 uncharacterized protein 836655 At5g65300 -75.56	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT1G26790 Dof-type zinc finger DNA-binding family protein 839220 At1g26790 -122.30 ELIP2 Chlorophyll A-B binding family protein 827119 At4g14690 -119.31 LHY Homeodomain-like superfamily protein 839341 At1g01060 -113.88 BETA-OHASE 2 beta-carotene hydroxylase 2 835334 At5g52570 -96.35 CCA1 circadian clock associated 1 819296 At2g46830 -95.26 BBX32 B-box 32 821667 At3g21150 -93.01 RVE1 Homeodomain-like superfamily protein 831595 At5g17300 -90.61 AT3G54510 Early-responsive to dehydration stress protein (ERD4) 824616 At3g54510 -88.06 HYH HY5-homolog 821027 At3g17609 -88.04 AT3G09450 fusaric acid resistance family protein 820103 At3g09450 -87.06 AT5G17350 uncharacterized protein 831601 At5g17350 -87.00 PHI-1 Phosphate-responsive 1 family protein 840399 At1g35140 -85.47 SWEET2 Nodulin MtN3 family protein 820705 At3g14770 -83.08 BMY3 beta-amylase 3 831985 At5g18670 -83.06 RVE8 Homeodomain-like superfamily protein 820117 At3g09600 -81.32 NDA1 alternative NAD(P)H dehydrogenase 1 837229 At1g07180 -81.07 ASG4 Homeodomain-like superfamily protein 839337 At1g01520 -79.48 AT4G15430 ERD (early-responsive to dehydration stress) family protein 827214 At4g15430 -78.75 AT3G12320 uncharacterized protein 820411 At3g12320 -78.67 SP1L4 SPIRAL1-like4 831412 At5g15600 -74.98 BBX30 B-box type zinc finger family protein 3769879 At4g15248 -74.63 AT1G64500 Glutaredoxin family protein 842758 At1g64500 -73.58 AT1G68440 uncharacterized protein 843173 At1g68440 -72.76 TMAC2 AFP2 (ABI five-binding protein 2) family protein 821182 At3g02140 -72.69 AT2G27420 Cysteine proteinases superfamily protein 817287 At2g27420 -71.93 cPT4 Undecaprenyl pyrophosphate synthetase family protein 835991 At5g58770 -71.20 RUP2 Transducin/WD40 repeat-like superfamily protein 832438 At5g23730 -70.94 AO L-aspartate oxidase 831328 At5g14760 -70.08 AT3G50560 NAD(P)-binding Rossmann-fold superfamily protein 824220 At3g50560 -69.77 AT2G15020 uncharacterized protein 815991 At2g15020 -69.60 CYCP2;1 cyclin p2;1 821742 At3g21870 -69.52 AT5G06980 uncharacterized protein 830589 At5g06980 -69.50 AT3G54500 agglutinin-like protein 824615 At3g54500 -69.33 COL2 CONSTANS-like 2 821298 At3g02380 -68.81 AT1G65490 uncharacterized protein 842861 At1g65490 -67.65 AT3G56290 potassium transporter 824796 At3g56290 -67.08 ELIP1 Chlorophyll A-B binding family protein 821855 At3g22840 -66.07 AT5G42760 Leucine carboxyl methyltransferase 834285 At5g42760 -65.59 STH salt tolerance homologue 817696 At2g31380 -64.72 AT2G23690 HTH-type transcriptional regulator 816900 At2g23690 -64.25 GDPD2 PLC-like phosphodiesterases superfamily protein 834110 At5g41080 -64.07 TRY Homeodomain-like superfamily protein 835401 At5g53200 -63.97 AT2G36630 Sulfite exporter TauE/SafE family protein 818235 At2g36630 -63.92 AT5G49700 Putative AT-hook DNA-binding family protein 835033 At5g49700 -63.42 AT5G66740 spindle assembly abnormal protein (DUF620) 836807 At5g66740 -62.28 AT4G19820 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein 827726 At4g19820 -61.98 AT1G65870 Disease resistance-responsive (dirigent-like protein) family protein 842898 At1g65870 -61.88 CLC-B chloride channel B 822336 At3g27170 -61.64 BBX31 B-box type zinc finger family protein 821744 At3g21890 -61.07 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 818724 At2g41250 -60.89 MES16 methyl esterase 16 827371 At4g16690 -59.31 AT1G55960 Polyketide cyclase/dehydrase and lipid transport superfamily protein 842047 At1g55960 -59.28 CP1 Ca2+-binding protein 1 835008 At5g49480 -59.03 Hop3 stress-inducible protein 826849 At4g12400 -58.96 WOX2 WUSCHEL related homeobox 2 836053 At5g59340 -58.76 CAT2 catalase 2 829661 At4g35090 -58.69 BT5 BTB and TAZ domain protein 5 829915 At4g37610 -58.60 HSFA7A heat shock transcription factor A7A 824354 At3g51910 -58.57 SIGE sigma factor E 832477 At5g24120 -58.42 LEA3 Late embryogenesis abundant 3 (LEA3) family protein 839304 At1g02820 -58.41 FADA fatty acid desaturase A 828811 At4g27030 -58.18 CXE13 carboxyesterase 13 824031 At3g48700 -57.94 CDF2 cycling DOF factor 2 833962 At5g39660 -57.68 CRY3 cryptochrome 3 832554 At5g24850 -57.67 DREB26 Integrase-type DNA-binding superfamily protein 838793 At1g21910 -57.05 AT5G51440 HSP20-like chaperones superfamily protein 835218 At5g51440 -56.79 GPX7 glutathione peroxidase 7 829316 At4g31870 -56.73 ASPGB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 820860 At3g16150 -56.73 AMT1;2 ammonium transporter 1;2 842786 At1g64780 -56.62 AT3G49160 pyruvate kinase family protein 824077 At3g49160 -56.40 BETA-OHASE 1 beta-hydroxylase 1 828675 At4g25700 -56.00 BBX16 B-box type zinc finger protein with CCT domain-containing protein 843723 At1g73870 -55.94 AT4G21323 Subtilase family protein 827881 At4g21323 -55.92 HSP17.6II 17.6 kDa class II heat shock protein 831075 At5g12020 -55.67 AT4G39675 uncharacterized protein 830122 At4g39675 -55.60 AT3G53830 Regulator of chromosome condensation (RCC1) family protein 824550 At3g53830 -55.23 AT5G47610 RING/U-box superfamily protein 834811 At5g47610 -55.04 MTM1 manganese tracking factor for mitochondrial SOD2 828907 At4g27940 -54.96 GBSS1 UDP-Glycosyltransferase superfamily protein 840184 At1g32900 -54.89 PHR1 photolyase 1 837792 At1g12370 -54.84 EXO Phosphate-responsive 1 family protein 826473 At4g08950 -54.72 AT1G24580 RING/U-box superfamily protein 2745762 At1g24580 -54.72 RUP1 Transducin/WD40 repeat-like superfamily protein 835301 At5g52250 -54.50 HSP17.6A heat shock protein 17.6A 831076 At5g12030 -54.40 CGA1 cytokinin-responsive gata factor 1 828721 At4g26150 -54.09 AT5G45630 senescence regulator (Protein of unknown function, DUF584) 834603 At5g45630 -54.03 AT4G36850 PQ-loop repeat family protein / transmembrane family protein 829838 At4g36850 -54.00 AT4G24700 uncharacterized protein 828572 At4g24700 -53.99 BBX19 B-box type zinc finger family protein 830051 At4g38960 -53.96 HSFA2 heat shock transcription factor A2 817155 At2g26150 -53.82 AT3G23510 Cyclopropane-fatty-acyl-phospholipid synthase 821931 At3g23510 -53.70 AT2G04795 uncharacterized protein 815023 At2g04795 -53.63 AT1G07160 Protein phosphatase 2C family protein 837227 At1g07160 -53.55 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family 835500 At5g54130 -53.40 NCS1 permease, cytosine/purines, uracil, thiamine, allantoin family protein 831791 At5g03555 -53.30 AT4G33420 Peroxidase superfamily protein 829479 At4g33420 -53.07 AT1G71520 Integrase-type DNA-binding superfamily protein 843492 At1g71520 -52.75 ATTPPA Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 835220 At5g51460 -52.54 TCH4 Xyloglucan endotransglucosylase/hydrolase family protein 835860 At5g57560 -52.51 HSA32 Aldolase-type TIM barrel family protein 827880 At4g21320 -51.81	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC UPI Serine protease inhibitor, potato inhibitor I-type family protein 834378 At5g43580 -86.74 AT3G59930 defensin-like protein 825163 At3g59930 -72.42 AT3G15357 phosphopantothenoylcysteine decarboxylase subunit 820774 At3g15357 -72.33 RAP2.6 uncharacterized protein 840915 At1g43160 -71.28 KTI1 kunitz trypsin inhibitor 1 843660 At1g73260 -70.18 ELI3-2 cinnamyl alcohol dehydrogenase 8 829955 At4g37990 -68.61 AT5G43570 Serine protease inhibitor, potato inhibitor I-type family protein 834377 At5g43570 -65.69 MAP18 microtubule-associated protein 18 834489 At5g44610 -61.35 AT5G64100 Peroxidase superfamily protein 836531 At5g64100 -61.19 PSK1 phytosulfokine 1 precursor 837920 At1g13590 -60.89 AT5G00590 28720272 AT5G00590 -60.43 OEP6 outer envelope membrane protein 825491 At3g63160 -60.28 TI1 trypsin inhibitor protein 1 818952 At2g43510 -60.22 AT2G38240 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 818403 At2g38240 -59.80 FLS5 flavonol synthase 5 836480 At5g63600 -59.44 AT1G07050 CCT motif family protein 837216 At1g07050 -58.75 ELF4 EARLY FLOWERING-like protein (DUF1313) 818596 At2g40080 -58.71 AT4G04565 28719572 AT4G04565 -58.48 AT1G60740 Thioredoxin superfamily protein 842368 At1g60740 -57.42 AT5G33355 Defensin-like (DEFL) family protein 833312 At5g33355 -57.30 AT3G62530 ARM repeat superfamily protein 825427 At3g62530 -57.11 AGP24 arabinogalactan protein 24 834073 At5g40730 -57.02 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily protein 825429 At3g62550 -56.53 AT4G39675 uncharacterized protein 830122 At4g39675 -56.34 DIN11 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 824124 At3g49620 -56.11 AT2G37750 uncharacterized protein 818352 At2g37750 -55.88 EARLI1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826860 At4g12480 -55.83 AT1G71000 Chaperone DnaJ-domain superfamily protein 843439 At1g71000 -55.47 PDF1.4 defensin-like protein 838548 At1g19610 -55.33 MT1C metallothionein 1C 837274 At1g07610 -55.33 RAP2.9 uncharacterized protein 826148 At4g06746 -55.27 AT1G23100 GroES-like family protein 838918 At1g23100 -55.24 GSTU25 glutathione S-transferase TAU 25 838289 At1g17180 -55.24 AT2G15960 stress-induced protein 816091 At2g15960 -54.74 AT1G56300 Chaperone DnaJ-domain superfamily protein 842083 At1g56300 -54.52 HSP17.6A heat shock protein 17.6A 831076 At5g12030 -54.32 GLYI7 Lactoylglutathione lyase / glyoxalase I family protein 844356 At1g80160 -54.08 AT3G09680 Ribosomal protein S12/S23 family protein 820125 At3g09680 -54.06 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 826861 At4g12490 -53.88 COR27 cold regulated protein 27 834301 At5g42900 -53.80 TH8 thioredoxin H-type 8 843324 At1g69880 -53.56 AT1G54890 Late embryogenesis abundant (LEA) protein-like protein 841928 At1g54890 -53.54 trnL tRNA-Leu 1466259 ArthCt101 -53.50 RNS1 ribonuclease 1 814828 At2g02990 -53.50 TI2 trypsin inhibitor protein 2 818953 At2g43520 -53.27 NATA1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 818489 At2g39030 -52.95 DTX1 MATE efflux family protein 814938 At2g04040 -52.66 RGF7 root meristem growth factor-like protein 820386 At3g02240 -52.55 AT2G29500 HSP20-like chaperones superfamily protein 817499 At2g29500 -52.27 AT1G10585 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837600 At1g10585 -52.15 AT1G06553 28716516 AT1G06553 -52.12 TOM7-2 translocase of outer membrane 7 kDa subunit 2 842727 At1g64220 -52.04 AT4G15680 Thioredoxin superfamily protein 827245 At4g15680 -51.84 AT2G00670 28717476 AT2G00670 -51.82 AT1G09500 NAD(P)-binding Rossmann-fold superfamily protein 837475 At1g09500 -51.76 HSP17.6II 17.6 kDa class II heat shock protein 831075 At5g12020 -51.76 AT2G31141 uncharacterized protein 6240467 At2g31141 -51.58 AT5G16980 Zinc-binding dehydrogenase family protein 831561 At5g16980 -51.52 BT2 BTB and TAZ domain protein 2 823994 At3g48360 -51.38 AT5G02575 28720481 AT5G02575 -51.15 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 816648 At2g21130 -51.05 AT4G26670 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 828774 At4g26670 -51.05 AT4G04595 28719574 AT4G04595 -50.95 AT5G44575 uncharacterized protein 834485 At5g44575 -50.77 AT2G39518 Uncharacterized protein family (UPF0497) 5007945 At2g39518 -50.69 AT5G09935 28721142 AT5G09935 -50.62 AT3G02480 Late embryogenesis abundant protein (LEA) family protein 821185 At3g02480 -50.61 trnK tRNA-Lys 1466272 ArthCt089 -50.36 AT5G53740 uncharacterized protein 835455 At5g53740 -50.19 AT2G14460 uncharacterized protein 815934 At2g14460 -49.84 AT2G26500 cytochrome b6f complex subunit (petM) 817191 At2g26500 -49.50 AT5G08155 28720952 AT5G08155 -49.46 AT2G05510 Glycine-rich protein family 815100 At2g05510 -49.35 HSP23.6-MITO mitochondrion-localized small heat shock protein 23.6 828623 At4g25200 -49.33 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily protein 816639 At2g21045 -49.27 AT4G22230 defensin-like protein 828317 At4g22230 -49.24 AT3G56020 Ribosomal protein L41 family 824768 At3g56020 -49.21 U2.5 28721113 At5g09585 -49.20 GRP9 GLYCINE RICH PROTEIN 9 815093 At2g05440 -49.17 MLP329 MLP-like protein 329 814682 At2g01530 -49.00 GRP3S glycine-rich protein 3 short isoform 815086 At2g05380 -48.97 FKBP13 FK506-binding protein 13 834607 At5g45680 -48.92 CRR7 chlororespiratory reduction 7 833917 At5g39210 -48.85 AT1G79075 5007857 At1g79075 -48.82 AT3G08520 Ribosomal protein L41 family 820000 At3g08520 -48.73 AT4G15690 Thioredoxin superfamily protein 827246 At4g15690 -48.65 AT3G29034 uncharacterized protein 822546 At3g29034 -48.60 GSTU8 glutathione S-transferase TAU 8 820083 At3g09270 -48.52 AT4G05185 28719614 AT4G05185 -48.43 AT7SL-1 7SL RNA1 828121 At4g02970 -48.39 U2.6 3769727 At3g56705 -48.19 AT1G68500 uncharacterized protein 843179 At1g68500 -48.18 U2.4 3769728 At3g56825 -48.13 AT5G56100 glycine-rich protein / oleosin 835709 At5g56100 -48.02 UGT73C1 UDP-glucosyl transferase 73C1 818247 At2g36750 -47.94 U2.7 3771548 At5g61455 -47.82 AZI1 azelaic acid induced 1 826859 At4g12470 -47.70 AT5G50760 SAUR-like auxin-responsive protein family 835148 At5g50760 -47.58 AT1G53540 HSP20-like chaperones superfamily protein 841789 At1g53540 -47.49 AT2G44010 uncharacterized protein 819006 At2g44010 -47.39	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC AT1G62500 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 842547 At1g62500 -104.83 AT4G22490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 828344 At4g22490 -100.34 GRF5 growth-regulating factor 5 820609 At3g13960 -99.61 DIN2 Glycosyl hydrolase superfamily protein 825184 At3g60140 -98.45 AT3G05727 S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family 3768785 At3g05727 -97.42 DOX1 Peroxidase superfamily protein 821135 At3g01420 -96.32 PR1 pathogenesis-related protein 1 815949 At2g14610 -96.32 AT4G29030 Putative membrane lipoprotein 829024 At4g29030 -95.17 SAG13 senescence-associated gene 13 817484 At2g29350 -93.57 AT4G36700 RmlC-like cupins superfamily protein 829823 At4g36700 -92.53 STM KNOX/ELK homeobox transcription factor 842534 At1g62360 -92.47 TYRDC L-tyrosine decarboxylase 828986 At4g28680 -92.42 AT1G26390 FAD-binding Berberine family protein 839181 At1g26390 -92.20 LTP6 lipid transfer protein 6 820024 At3g08770 -92.05 AT5G38940 RmlC-like cupins superfamily protein 833886 At5g38940 -90.89 AT1G31310 hydroxyproline-rich glycoprotein family protein 840019 At1g31310 -90.29 AT5G58390 Peroxidase superfamily protein 835952 At5g58390 -89.98 OSM34 osmotin 34 826770 At4g11650 -89.75 CSLG2 cellulose synthase like G2 828500 At4g24000 -89.36 AT3G05600 alpha/beta-Hydrolases superfamily protein 819726 At3g05600 -86.97 AT4G31805 WRKY family transcription factor 829309 At4g31805 -86.25 AT5G64110 Peroxidase superfamily protein 836532 At5g64110 -85.87 PRB1 basic pathogenesis-related protein 1 815945 At2g14580 -85.34 AT4G19970 nucleotide-diphospho-sugar transferase family protein 827741 At4g19970 -85.15 CYP78A5 cytochrome P450, family 78, subfamily A, polypeptide 5 837932 At1g13710 -83.48 ABCG8 ABC-2 type transporter family protein 835363 At5g52860 -83.35 AT2G24700 Transcriptional factor B3 family protein 817006 At2g24700 -82.64 CYP77B1 cytochrome P450, family 77, subfamily B, polypeptide 1 837704 At1g11600 -82.54 CDEF1 GDSL-like Lipase/Acylhydrolase superfamily protein 829137 At4g30140 -82.12 AOX1D alternative oxidase 1D 840127 At1g32350 -82.11 THA1 threonine aldolase 1 837385 At1g08630 -81.32 AT1G52100 Mannose-binding lectin superfamily protein 841640 At1g52100 -81.30 ABCG15 ABC-2 type transporter family protein 821661 At3g21090 -80.83 AT5G39520 hypothetical protein (DUF1997) 833948 At5g39520 -80.27 M17 glycine-rich protein / late embryogenesis abundant protein (M17) 818725 At2g41260 -79.52 CEL2 cellulase 2 839385 At1g02800 -78.37 PDF1 protodermal factor 1 818884 At2g42840 -77.66 CYP82C2 cytochrome P450, family 82, subfamily C, polypeptide 2 829327 At4g31970 -76.76 AT5G33370 GDSL-like Lipase/Acylhydrolase superfamily protein 833315 At5g33370 -76.41 CYP78A7 cytochrome P450, family 78, subfamily A, polypeptide 7 830858 At5g09970 -75.75 ARD3 acireductone dioxygenase 3 817180 At2g26400 -75.39 IQD25 IQ-domain 25 829036 At4g29150 -74.95 CYP96A9 cytochrome P450, family 96, subfamily A, polypeptide 9 830103 At4g39480 -74.61 AT5G66940 Dof-type zinc finger DNA-binding family protein 836828 At5g66940 -74.34 ORP4C OSBP(oxysterol binding protein)-related protein 4C 835830 At5g57240 -74.31 SPL8 squamosa promoter binding protein-like 8 839275 At1g02065 -74.03 PAP85 cupin family protein 821835 At3g22640 -73.95 AT5G38930 RmlC-like cupins superfamily protein 833885 At5g38930 -73.89 CYP71B22 cytochrome P450, family 71, subfamily B, polypeptide 22 822221 At3g26200 -73.73 AGO9 Argonaute family protein 832241 At5g21150 -73.26 CHAL allergen-like protein 817587 At2g30370 -73.14 AT3G20395 RING/U-box superfamily protein 5008015 At3g20395 -73.09 AT1G26410 FAD-binding Berberine family protein 839183 At1g26410 -72.91 CYP71A13 cytochrome P450 family 71 polypeptide 817628 At2g30770 -72.58 PDF1.4 defensin-like protein 838548 At1g19610 -72.56 KTI1 kunitz trypsin inhibitor 1 843660 At1g73260 -72.42 AT4G12870 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein 826899 At4g12870 -72.32 scpl31 serine carboxypeptidase-like 31 837649 At1g11080 -71.99 AIG1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 840293 At1g33960 -71.94 ICL isocitrate lyase 821726 At3g21720 -71.92 CYP71A12 cytochrome P450 family 71 polypeptide 817626 At2g30750 -71.67 SPCH basic helix-loop-helix (bHLH) DNA-binding superfamily protein 835402 At5g53210 -71.23 AT3G06220 AP2/B3-like transcriptional factor family protein 819796 At3g06220 -70.87 PRX52 Peroxidase superfamily protein 830416 At5g05340 -70.49 AT3G11000 DCD (Development and Cell Death) domain protein 820271 At3g11000 -70.48 LOB Lateral organ boundaries (LOB) domain family protein 836429 At5g63090 -69.26 AT4G36850 PQ-loop repeat family protein / transmembrane family protein 829838 At4g36850 -69.15 CYP706A3 cytochrome P450, family 706, subfamily A, polypeptide 3 834490 At5g44620 -69.05 AT4G30250 P-loop containing nucleoside triphosphate hydrolases superfamily protein 829148 At4g30250 -69.00 MIOX4 myo-inositol oxygenase 4 828732 At4g26260 -68.87 GLYI7 Lactoylglutathione lyase / glyoxalase I family protein 844356 At1g80160 -68.72 AT5G59390 XH/XS domain-containing protein 836058 At5g59390 -68.51 FTM1 Plant stearoyl-acyl-carrier-protein desaturase family protein 840977 At1g43800 -68.49 GulLO2 D-arabinono-1,4-lactone oxidase family protein 819288 At2g46750 -68.33 ERL1 ERECTA-like 1 836344 At5g62230 -68.01 DFR dihydroflavonol 4-reductase 834291 At5g42800 -67.97 UPI Serine protease inhibitor, potato inhibitor I-type family protein 834378 At5g43580 -67.85 WOX1 WUSCHEL related homeobox 1 821325 At3g18010 -67.85 AT1G31040 PLATZ transcription factor family protein 839990 At1g31040 -67.54 AT5G55720 Pectin lyase-like superfamily protein 835666 At5g55720 -67.26 AT5G64910 Serine/Threonine-kinase 836615 At5g64910 -66.88 BGLU28 beta glucosidase 28 819053 At2g44460 -66.83 LAC7 laccase 7 820078 At3g09220 -66.72 LTL1 Li-tolerant lipase 1 819584 At3g04290 -66.63 AT4G13540 golgin family A protein 826986 At4g13540 -66.35 AT5G27890 uncharacterized protein 832853 At5g27890 -66.26 AT2G19910 RNA-dependent RNA polymerase family protein 816510 At2g19910 -66.11 AT1G48660 Auxin-responsive GH3 family protein 841288 At1g48660 -66.09 AO4 aldehyde oxidase 4 839488 At1g04580 -66.07 KNAT1 homeobox knotted-like protein 826364 At4g08150 -65.50 CYP76C2 cytochrome P450, family 76, subfamily C, polypeptide 2 819165 At2g45570 -65.27 MYB17 myb domain protein 17 825297 At3g61250 -65.13 AT2G04050 MATE efflux family protein 814939 At2g04050 -64.67 ADS4 Fatty acid desaturase family protein 837146 At1g06350 -64.30 KCS19 3-ketoacyl-CoA synthase 19 830332 At5g04530 -64.23 AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834905 At5g48490 -64.21 AT4G25580 CAP160 protein 828663 At4g25580 -64.20 SOM Zinc finger C-x8-C-x5-C-x3-H type family protein 839408 At1g03790 -64.16 BGLU45 beta-glucosidase 45 842478 At1g61810 -64.00 GRF7 growth-regulating factor 7 835447 At5g53660 -63.79