cis; ATATCTA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATATCTA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATATCTA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
no TF correlated.

link to other 304 cis elements in ATTED

similar seq.
←ATATCTA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TAGATAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATATCTA1.000.0889
AATATCT0.890.1480
AAATATC0.840.1477
AGATATT0.770.1128
GATATTT0.760.1049
AAAATAT0.720.07118
ATATCTT0.700.0779
AAGATAT0.690.0750
ATGTCGG0.640.07111
GCCGACA0.610.08121