[←][→] vvi   VIT_00025059001 Gene
functional annotation
Function   probable NOT transcription complex subunit VIP2  
GO BP
GO CC
GO MF
KEGG vvi03018 [list] [network] RNA degradation (104 genes)
Protein XP_002284532.2  XP_010651075.1  XP_010651077.1  XP_010651078.1  XP_019076243.1 
BLAST XP_002284532.2  XP_010651075.1  XP_010651077.1  XP_010651078.1  XP_019076243.1 
Orthologous [Ortholog page] VIP2 (ath)  AT1G07705 (ath)  LOC4330931 (osa)  LOC4334027 (osa)  LOC11418070 (mtr)  LOC25492462 (mtr)  LOC100263354 (vvi)  LOC100281429 (zma)  LOC100381661 (zma)  LOC100776413 (gma)  LOC100783662 (gma)  LOC100806559 (gma)  LOC100807026 (gma)  LOC101256781 (sly)  LOC101258724 (sly)  LOC103851558 (bra)  LOC103856612 (bra)  LOC103871522 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_002284532.2)
nucl 9,  chlo 1  (predict for XP_010651075.1)
nucl 9,  chlo 1  (predict for XP_010651077.1)
nucl 9,  chlo 1  (predict for XP_010651078.1)
nucl 9,  chlo 1  (predict for XP_019076243.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002284532.2)
chlo 6  (predict for XP_010651075.1)
chlo 7  (predict for XP_010651077.1)
chlo 7  (predict for XP_010651078.1)
chlo 6  (predict for XP_019076243.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 RNA transport 2
vvi03040 Spliceosome 2
Genes directly connected with LOC100248449 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 LOC100253195 KH domain-containing protein At4g18375 [detail] 100253195
5.3 LOC100258288 exportin-T [detail] 100258288
5.3 LOC100245159 thioredoxin-like protein slr0233 [detail] 100245159
5.0 LOC100261383 rhodanese-like domain-containing protein 6 [detail] 100261383
4.5 LOC100265835 transcription initiation factor TFIID subunit 6 [detail] 100265835
Coexpressed
gene list		 [Coexpressed gene list for LOC100248449]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100248449      
Refseq ID (protein) XP_002284532.2 
XP_010651075.1 
XP_010651077.1 
XP_010651078.1 
XP_019076243.1 


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