[←][→] ath   AT5G59710 Gene
functional annotation
Function   VIRE2 interacting protein 2  
GO BP
GO:0015074 [list] [network] DNA integration  (3 genes)  IMP  
GO:0017148 [list] [network] negative regulation of translation  (33 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEP  
GO CC
GO:0030015 [list] [network] CCR4-NOT core complex  (14 genes)  IBA  
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001329954.1  NP_001329955.1  NP_568912.2 
BLAST NP_001329954.1  NP_001329955.1  NP_568912.2 
Orthologous [Ortholog page] AT1G07705 (ath)  LOC4330931 (osa)  LOC4334027 (osa)  LOC11418070 (mtr)  LOC25492462 (mtr)  LOC100248449 (vvi)  LOC100263354 (vvi)  LOC100281429 (zma)  LOC100381661 (zma)  LOC100776413 (gma)  LOC100783662 (gma)  LOC100806559 (gma)  LOC100807026 (gma)  LOC101256781 (sly)  LOC101258724 (sly)  LOC103851558 (bra)  LOC103856612 (bra)  LOC103871522 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for NP_001329954.1)
nucl 8,  chlo 1  (predict for NP_001329955.1)
nucl 8,  chlo 1  (predict for NP_568912.2)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for NP_001329954.1)
chlo 5,  other 5  (predict for NP_001329955.1)
chlo 5,  other 5  (predict for NP_568912.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
Genes directly connected with VIP2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT2G01690 ARM repeat superfamily protein [detail] 814698
5.8 AT5G06120 ARM repeat superfamily protein [detail] 830499
5.8 AT5G25520 SPOC domain / Transcription elongation factor S-II protein [detail] 832627
5.7 MSL2 MSCS-like 2 [detail] 830913
5.6 AT4G10430 TMPIT-like protein [detail] 826635
Coexpressed
gene list		 [Coexpressed gene list for VIP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247695_at
247695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247695_at
247695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247695_at
247695_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836092      
Refseq ID (protein) NP_001329954.1 
NP_001329955.1 
NP_568912.2 


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